Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03144

Experiment: L-Aspartic Acid (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03143 and MPMX26_03144 are separated by 140 nucleotidesMPMX26_03144 and MPMX26_03145 are separated by 163 nucleotidesMPMX26_03145 and MPMX26_03146 are separated by 229 nucleotides MPMX26_03143: MPMX26_03143 - DNA primase TraC, at 1,900 to 2,763 _03143 MPMX26_03144: MPMX26_03144 - hypothetical protein, at 2,904 to 3,188 _03144 MPMX26_03145: MPMX26_03145 - hypothetical protein, at 3,352 to 3,825 _03145 MPMX26_03146: MPMX26_03146 - hypothetical protein, at 4,055 to 4,378 _03146 Position (kb) 2 3 4Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1.981 kb on - strandat 1.996 kb on - strand, within MPMX26_03143at 2.161 kb on + strand, within MPMX26_03143at 2.202 kb on + strand, within MPMX26_03143at 2.274 kb on + strand, within MPMX26_03143at 2.290 kb on + strand, within MPMX26_03143at 2.360 kb on + strand, within MPMX26_03143at 2.360 kb on + strand, within MPMX26_03143at 2.381 kb on + strand, within MPMX26_03143at 2.386 kb on + strand, within MPMX26_03143at 2.386 kb on + strand, within MPMX26_03143at 2.386 kb on + strand, within MPMX26_03143at 2.386 kb on + strand, within MPMX26_03143at 2.386 kb on + strand, within MPMX26_03143at 2.420 kb on + strand, within MPMX26_03143at 2.488 kb on + strand, within MPMX26_03143at 2.488 kb on + strand, within MPMX26_03143at 2.488 kb on + strand, within MPMX26_03143at 2.488 kb on + strand, within MPMX26_03143at 2.496 kb on - strand, within MPMX26_03143at 2.508 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.568 kb on + strand, within MPMX26_03143at 2.596 kb on + strand, within MPMX26_03143at 2.608 kb on + strand, within MPMX26_03143at 2.608 kb on + strand, within MPMX26_03143at 2.608 kb on + strand, within MPMX26_03143at 2.608 kb on + strand, within MPMX26_03143at 2.608 kb on + strand, within MPMX26_03143at 2.610 kb on + strand, within MPMX26_03143at 2.747 kb on + strandat 2.752 kb on + strandat 2.981 kb on + strand, within MPMX26_03144at 2.981 kb on + strand, within MPMX26_03144at 2.981 kb on + strand, within MPMX26_03144at 2.982 kb on - strand, within MPMX26_03144at 3.030 kb on + strand, within MPMX26_03144at 3.036 kb on + strand, within MPMX26_03144at 3.041 kb on + strand, within MPMX26_03144at 3.118 kb on + strand, within MPMX26_03144at 3.118 kb on + strand, within MPMX26_03144at 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.217 kb on + strandat 3.227 kb on + strandat 3.397 kb on + strandat 3.397 kb on + strandat 3.397 kb on + strandat 3.472 kb on + strand, within MPMX26_03145at 3.486 kb on - strand, within MPMX26_03145at 3.490 kb on - strand, within MPMX26_03145at 3.490 kb on - strand, within MPMX26_03145at 3.585 kb on + strand, within MPMX26_03145at 3.602 kb on + strand, within MPMX26_03145at 3.624 kb on + strand, within MPMX26_03145at 3.624 kb on + strand, within MPMX26_03145at 3.624 kb on + strand, within MPMX26_03145at 3.624 kb on + strand, within MPMX26_03145at 3.632 kb on + strand, within MPMX26_03145at 3.632 kb on + strand, within MPMX26_03145at 3.634 kb on + strand, within MPMX26_03145at 3.682 kb on + strand, within MPMX26_03145at 3.682 kb on + strand, within MPMX26_03145at 3.711 kb on + strand, within MPMX26_03145at 3.711 kb on + strand, within MPMX26_03145at 3.729 kb on + strand, within MPMX26_03145at 3.772 kb on + strand, within MPMX26_03145at 4.113 kb on - strand, within MPMX26_03146at 4.152 kb on + strand, within MPMX26_03146at 4.160 kb on - strand, within MPMX26_03146at 4.165 kb on - strand, within MPMX26_03146

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
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1,981 - +4.4
1,996 - MPMX26_03143 0.11 +0.5
2,161 + MPMX26_03143 0.30 -0.2
2,202 + MPMX26_03143 0.35 -0.5
2,274 + MPMX26_03143 0.43 +0.2
2,290 + MPMX26_03143 0.45 -1.2
2,360 + MPMX26_03143 0.53 -0.9
2,360 + MPMX26_03143 0.53 +0.9
2,381 + MPMX26_03143 0.56 +0.2
2,386 + MPMX26_03143 0.56 +0.4
2,386 + MPMX26_03143 0.56 -0.7
2,386 + MPMX26_03143 0.56 +0.7
2,386 + MPMX26_03143 0.56 +1.8
2,386 + MPMX26_03143 0.56 +1.2
2,420 + MPMX26_03143 0.60 +1.2
2,488 + MPMX26_03143 0.68 -1.2
2,488 + MPMX26_03143 0.68 -1.3
2,488 + MPMX26_03143 0.68 -2.3
2,488 + MPMX26_03143 0.68 +1.2
2,496 - MPMX26_03143 0.69 +1.8
2,508 + MPMX26_03143 0.70 +0.4
2,568 + MPMX26_03143 0.77 -0.5
2,568 + MPMX26_03143 0.77 -1.8
2,568 + MPMX26_03143 0.77 +0.5
2,568 + MPMX26_03143 0.77 -0.5
2,568 + MPMX26_03143 0.77 -0.1
2,568 + MPMX26_03143 0.77 -0.5
2,568 + MPMX26_03143 0.77 -0.5
2,568 + MPMX26_03143 0.77 -0.7
2,568 + MPMX26_03143 0.77 +1.1
2,568 + MPMX26_03143 0.77 +0.8
2,568 + MPMX26_03143 0.77 +1.2
2,568 + MPMX26_03143 0.77 -0.2
2,596 + MPMX26_03143 0.81 +0.4
2,608 + MPMX26_03143 0.82 -0.5
2,608 + MPMX26_03143 0.82 +1.1
2,608 + MPMX26_03143 0.82 -0.1
2,608 + MPMX26_03143 0.82 +1.4
2,608 + MPMX26_03143 0.82 +0.8
2,610 + MPMX26_03143 0.82 +2.8
2,747 + +0.9
2,752 + +0.8
2,981 + MPMX26_03144 0.27 +2.8
2,981 + MPMX26_03144 0.27 -1.0
2,981 + MPMX26_03144 0.27 +1.4
2,982 - MPMX26_03144 0.27 +2.8
3,030 + MPMX26_03144 0.44 +1.4
3,036 + MPMX26_03144 0.46 -0.7
3,041 + MPMX26_03144 0.48 +1.6
3,118 + MPMX26_03144 0.75 -1.1
3,118 + MPMX26_03144 0.75 +1.1
3,217 + +0.9
3,217 + -1.2
3,217 + -0.8
3,217 + +0.7
3,217 + +0.7
3,217 + -0.6
3,217 + -1.1
3,217 + +0.7
3,217 + +0.2
3,227 + +0.2
3,397 + +0.2
3,397 + -1.0
3,397 + +0.2
3,472 + MPMX26_03145 0.25 -1.0
3,486 - MPMX26_03145 0.28 +1.6
3,490 - MPMX26_03145 0.29 +2.8
3,490 - MPMX26_03145 0.29 +1.4
3,585 + MPMX26_03145 0.49 -0.2
3,602 + MPMX26_03145 0.53 +0.2
3,624 + MPMX26_03145 0.57 -0.8
3,624 + MPMX26_03145 0.57 -0.1
3,624 + MPMX26_03145 0.57 +0.4
3,624 + MPMX26_03145 0.57 +2.1
3,632 + MPMX26_03145 0.59 -0.4
3,632 + MPMX26_03145 0.59 +1.8
3,634 + MPMX26_03145 0.59 +1.9
3,682 + MPMX26_03145 0.70 -1.4
3,682 + MPMX26_03145 0.70 -0.2
3,711 + MPMX26_03145 0.76 +0.7
3,711 + MPMX26_03145 0.76 -1.1
3,729 + MPMX26_03145 0.80 +1.1
3,772 + MPMX26_03145 0.89 +0.0
4,113 - MPMX26_03146 0.18 +2.1
4,152 + MPMX26_03146 0.30 +0.9
4,160 - MPMX26_03146 0.32 -1.5
4,165 - MPMX26_03146 0.34 -0.5

Or see this region's nucleotide sequence