Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02755

Experiment: L-Aspartic Acid (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02753 and MPMX26_02754 are separated by 208 nucleotidesMPMX26_02754 and MPMX26_02755 are separated by 261 nucleotidesMPMX26_02755 and MPMX26_02756 overlap by 1 nucleotides MPMX26_02753: MPMX26_02753 - hypothetical protein, at 2,837,749 to 2,838,855 _02753 MPMX26_02754: MPMX26_02754 - hypothetical protein, at 2,839,064 to 2,839,522 _02754 MPMX26_02755: MPMX26_02755 - Glycine--tRNA ligase alpha subunit, at 2,839,784 to 2,840,773 _02755 MPMX26_02756: MPMX26_02756 - Glycine--tRNA ligase beta subunit, at 2,840,773 to 2,842,842 _02756 Position (kb) 2839 2840 2841Strain fitness (log2 ratio) -1 0 1 2at 2838.834 kb on - strandat 2838.836 kb on - strandat 2838.853 kb on - strandat 2838.901 kb on - strandat 2839.006 kb on - strandat 2839.091 kb on + strandat 2839.104 kb on + strandat 2839.122 kb on + strand, within MPMX26_02754at 2839.182 kb on + strand, within MPMX26_02754

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
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2,838,834 - +0.3
2,838,836 - +1.0
2,838,853 - +0.7
2,838,901 - +0.6
2,839,006 - +1.7
2,839,091 + +2.6
2,839,104 + +0.2
2,839,122 + MPMX26_02754 0.13 +2.2
2,839,182 + MPMX26_02754 0.26 +2.0

Or see this region's nucleotide sequence