Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02723

Experiment: L-Aspartic Acid (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02721 and MPMX26_02722 are separated by 58 nucleotidesMPMX26_02722 and MPMX26_02723 are separated by 257 nucleotidesMPMX26_02723 and MPMX26_02724 are separated by 165 nucleotides MPMX26_02721: MPMX26_02721 - 50S ribosomal protein L3, at 2,802,701 to 2,803,339 _02721 MPMX26_02722: MPMX26_02722 - 30S ribosomal protein S10, at 2,803,398 to 2,803,709 _02722 MPMX26_02723: MPMX26_02723 - hypothetical protein, at 2,803,967 to 2,804,692 _02723 MPMX26_02724: MPMX26_02724 - Cystathionine beta-lyase, at 2,804,858 to 2,806,051 _02724 Position (kb) 2803 2804 2805Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2803.956 kb on + strandat 2803.971 kb on - strandat 2803.981 kb on - strandat 2803.981 kb on - strandat 2803.981 kb on - strandat 2803.981 kb on - strandat 2804.058 kb on - strand, within MPMX26_02723at 2804.215 kb on + strand, within MPMX26_02723at 2804.223 kb on - strand, within MPMX26_02723at 2804.270 kb on - strand, within MPMX26_02723at 2804.281 kb on - strand, within MPMX26_02723at 2804.299 kb on - strand, within MPMX26_02723at 2804.333 kb on - strand, within MPMX26_02723at 2804.343 kb on - strand, within MPMX26_02723at 2804.346 kb on - strand, within MPMX26_02723at 2804.366 kb on - strand, within MPMX26_02723at 2804.399 kb on - strand, within MPMX26_02723at 2804.465 kb on + strand, within MPMX26_02723at 2804.572 kb on - strand, within MPMX26_02723at 2804.573 kb on - strand, within MPMX26_02723at 2804.605 kb on - strand, within MPMX26_02723at 2804.605 kb on - strand, within MPMX26_02723at 2804.605 kb on - strand, within MPMX26_02723at 2804.902 kb on + strandat 2804.930 kb on + strandat 2804.930 kb on + strandat 2804.930 kb on + strandat 2804.986 kb on + strand, within MPMX26_02724at 2804.986 kb on + strand, within MPMX26_02724at 2804.986 kb on + strand, within MPMX26_02724at 2804.995 kb on + strand, within MPMX26_02724at 2804.995 kb on + strand, within MPMX26_02724at 2804.995 kb on + strand, within MPMX26_02724at 2804.995 kb on + strand, within MPMX26_02724at 2804.995 kb on + strand, within MPMX26_02724at 2804.995 kb on + strand, within MPMX26_02724at 2804.995 kb on + strand, within MPMX26_02724at 2805.003 kb on - strand, within MPMX26_02724at 2805.048 kb on + strand, within MPMX26_02724at 2805.048 kb on + strand, within MPMX26_02724at 2805.076 kb on + strand, within MPMX26_02724at 2805.076 kb on + strand, within MPMX26_02724at 2805.076 kb on + strand, within MPMX26_02724at 2805.076 kb on + strand, within MPMX26_02724at 2805.086 kb on + strand, within MPMX26_02724at 2805.086 kb on + strand, within MPMX26_02724at 2805.086 kb on + strand, within MPMX26_02724at 2805.086 kb on + strand, within MPMX26_02724at 2805.086 kb on + strand, within MPMX26_02724at 2805.159 kb on + strand, within MPMX26_02724at 2805.161 kb on + strand, within MPMX26_02724at 2805.161 kb on + strand, within MPMX26_02724at 2805.206 kb on + strand, within MPMX26_02724at 2805.329 kb on + strand, within MPMX26_02724at 2805.344 kb on + strand, within MPMX26_02724at 2805.353 kb on + strand, within MPMX26_02724at 2805.358 kb on + strand, within MPMX26_02724at 2805.358 kb on + strand, within MPMX26_02724at 2805.358 kb on + strand, within MPMX26_02724at 2805.397 kb on + strand, within MPMX26_02724at 2805.397 kb on + strand, within MPMX26_02724at 2805.397 kb on + strand, within MPMX26_02724at 2805.397 kb on + strand, within MPMX26_02724at 2805.397 kb on + strand, within MPMX26_02724at 2805.397 kb on + strand, within MPMX26_02724at 2805.397 kb on + strand, within MPMX26_02724at 2805.397 kb on + strand, within MPMX26_02724at 2805.473 kb on + strand, within MPMX26_02724at 2805.473 kb on + strand, within MPMX26_02724at 2805.481 kb on - strand, within MPMX26_02724at 2805.641 kb on + strand, within MPMX26_02724at 2805.680 kb on + strand, within MPMX26_02724

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
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2,803,956 + +1.8
2,803,971 - +0.4
2,803,981 - -0.2
2,803,981 - +2.7
2,803,981 - +1.6
2,803,981 - -0.2
2,804,058 - MPMX26_02723 0.13 -0.5
2,804,215 + MPMX26_02723 0.34 +0.4
2,804,223 - MPMX26_02723 0.35 +2.6
2,804,270 - MPMX26_02723 0.42 +0.3
2,804,281 - MPMX26_02723 0.43 +0.7
2,804,299 - MPMX26_02723 0.46 +0.6
2,804,333 - MPMX26_02723 0.50 -0.2
2,804,343 - MPMX26_02723 0.52 -1.6
2,804,346 - MPMX26_02723 0.52 +2.2
2,804,366 - MPMX26_02723 0.55 -0.5
2,804,399 - MPMX26_02723 0.60 -1.2
2,804,465 + MPMX26_02723 0.69 +0.4
2,804,572 - MPMX26_02723 0.83 +1.8
2,804,573 - MPMX26_02723 0.83 -0.0
2,804,605 - MPMX26_02723 0.88 +1.1
2,804,605 - MPMX26_02723 0.88 +1.1
2,804,605 - MPMX26_02723 0.88 -1.6
2,804,902 + +0.6
2,804,930 + +0.6
2,804,930 + +0.3
2,804,930 + +0.2
2,804,986 + MPMX26_02724 0.11 -0.4
2,804,986 + MPMX26_02724 0.11 +0.7
2,804,986 + MPMX26_02724 0.11 -1.2
2,804,995 + MPMX26_02724 0.11 +0.4
2,804,995 + MPMX26_02724 0.11 -1.4
2,804,995 + MPMX26_02724 0.11 +0.6
2,804,995 + MPMX26_02724 0.11 +1.6
2,804,995 + MPMX26_02724 0.11 -2.0
2,804,995 + MPMX26_02724 0.11 -1.0
2,804,995 + MPMX26_02724 0.11 +0.4
2,805,003 - MPMX26_02724 0.12 +2.4
2,805,048 + MPMX26_02724 0.16 +0.3
2,805,048 + MPMX26_02724 0.16 +2.2
2,805,076 + MPMX26_02724 0.18 +0.9
2,805,076 + MPMX26_02724 0.18 +0.3
2,805,076 + MPMX26_02724 0.18 +0.2
2,805,076 + MPMX26_02724 0.18 -0.2
2,805,086 + MPMX26_02724 0.19 -0.5
2,805,086 + MPMX26_02724 0.19 +0.5
2,805,086 + MPMX26_02724 0.19 +0.8
2,805,086 + MPMX26_02724 0.19 -0.2
2,805,086 + MPMX26_02724 0.19 -0.9
2,805,159 + MPMX26_02724 0.25 +0.6
2,805,161 + MPMX26_02724 0.25 -0.2
2,805,161 + MPMX26_02724 0.25 +0.2
2,805,206 + MPMX26_02724 0.29 +0.6
2,805,329 + MPMX26_02724 0.39 +2.9
2,805,344 + MPMX26_02724 0.41 -0.1
2,805,353 + MPMX26_02724 0.41 +1.0
2,805,358 + MPMX26_02724 0.42 +0.1
2,805,358 + MPMX26_02724 0.42 +0.1
2,805,358 + MPMX26_02724 0.42 +0.3
2,805,397 + MPMX26_02724 0.45 +0.8
2,805,397 + MPMX26_02724 0.45 -0.3
2,805,397 + MPMX26_02724 0.45 -0.2
2,805,397 + MPMX26_02724 0.45 -1.4
2,805,397 + MPMX26_02724 0.45 +1.3
2,805,397 + MPMX26_02724 0.45 +0.3
2,805,397 + MPMX26_02724 0.45 +1.2
2,805,397 + MPMX26_02724 0.45 +0.4
2,805,473 + MPMX26_02724 0.52 +1.2
2,805,473 + MPMX26_02724 0.52 +1.0
2,805,481 - MPMX26_02724 0.52 +0.4
2,805,641 + MPMX26_02724 0.66 +1.0
2,805,680 + MPMX26_02724 0.69 +1.8

Or see this region's nucleotide sequence