Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02721 and MPMX26_02722 are separated by 58 nucleotides MPMX26_02722 and MPMX26_02723 are separated by 257 nucleotides MPMX26_02723 and MPMX26_02724 are separated by 165 nucleotides
MPMX26_02721: MPMX26_02721 - 50S ribosomal protein L3, at 2,802,701 to 2,803,339
_02721
MPMX26_02722: MPMX26_02722 - 30S ribosomal protein S10, at 2,803,398 to 2,803,709
_02722
MPMX26_02723: MPMX26_02723 - hypothetical protein, at 2,803,967 to 2,804,692
_02723
MPMX26_02724: MPMX26_02724 - Cystathionine beta-lyase, at 2,804,858 to 2,806,051
_02724
Position (kb)
2803
2804
2805 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2803.956 kb on + strand at 2803.971 kb on - strand at 2803.981 kb on - strand at 2803.981 kb on - strand at 2803.981 kb on - strand at 2803.981 kb on - strand at 2804.058 kb on - strand, within MPMX26_02723 at 2804.215 kb on + strand, within MPMX26_02723 at 2804.223 kb on - strand, within MPMX26_02723 at 2804.270 kb on - strand, within MPMX26_02723 at 2804.281 kb on - strand, within MPMX26_02723 at 2804.299 kb on - strand, within MPMX26_02723 at 2804.333 kb on - strand, within MPMX26_02723 at 2804.343 kb on - strand, within MPMX26_02723 at 2804.346 kb on - strand, within MPMX26_02723 at 2804.366 kb on - strand, within MPMX26_02723 at 2804.399 kb on - strand, within MPMX26_02723 at 2804.465 kb on + strand, within MPMX26_02723 at 2804.572 kb on - strand, within MPMX26_02723 at 2804.573 kb on - strand, within MPMX26_02723 at 2804.605 kb on - strand, within MPMX26_02723 at 2804.605 kb on - strand, within MPMX26_02723 at 2804.605 kb on - strand, within MPMX26_02723 at 2804.902 kb on + strand at 2804.930 kb on + strand at 2804.930 kb on + strand at 2804.930 kb on + strand at 2804.986 kb on + strand, within MPMX26_02724 at 2804.986 kb on + strand, within MPMX26_02724 at 2804.986 kb on + strand, within MPMX26_02724 at 2804.995 kb on + strand, within MPMX26_02724 at 2804.995 kb on + strand, within MPMX26_02724 at 2804.995 kb on + strand, within MPMX26_02724 at 2804.995 kb on + strand, within MPMX26_02724 at 2804.995 kb on + strand, within MPMX26_02724 at 2804.995 kb on + strand, within MPMX26_02724 at 2804.995 kb on + strand, within MPMX26_02724 at 2805.003 kb on - strand, within MPMX26_02724 at 2805.048 kb on + strand, within MPMX26_02724 at 2805.048 kb on + strand, within MPMX26_02724 at 2805.076 kb on + strand, within MPMX26_02724 at 2805.076 kb on + strand, within MPMX26_02724 at 2805.076 kb on + strand, within MPMX26_02724 at 2805.076 kb on + strand, within MPMX26_02724 at 2805.086 kb on + strand, within MPMX26_02724 at 2805.086 kb on + strand, within MPMX26_02724 at 2805.086 kb on + strand, within MPMX26_02724 at 2805.086 kb on + strand, within MPMX26_02724 at 2805.086 kb on + strand, within MPMX26_02724 at 2805.159 kb on + strand, within MPMX26_02724 at 2805.161 kb on + strand, within MPMX26_02724 at 2805.161 kb on + strand, within MPMX26_02724 at 2805.206 kb on + strand, within MPMX26_02724 at 2805.329 kb on + strand, within MPMX26_02724 at 2805.344 kb on + strand, within MPMX26_02724 at 2805.353 kb on + strand, within MPMX26_02724 at 2805.358 kb on + strand, within MPMX26_02724 at 2805.358 kb on + strand, within MPMX26_02724 at 2805.358 kb on + strand, within MPMX26_02724 at 2805.397 kb on + strand, within MPMX26_02724 at 2805.397 kb on + strand, within MPMX26_02724 at 2805.397 kb on + strand, within MPMX26_02724 at 2805.397 kb on + strand, within MPMX26_02724 at 2805.397 kb on + strand, within MPMX26_02724 at 2805.397 kb on + strand, within MPMX26_02724 at 2805.397 kb on + strand, within MPMX26_02724 at 2805.397 kb on + strand, within MPMX26_02724 at 2805.473 kb on + strand, within MPMX26_02724 at 2805.473 kb on + strand, within MPMX26_02724 at 2805.481 kb on - strand, within MPMX26_02724 at 2805.641 kb on + strand, within MPMX26_02724 at 2805.680 kb on + strand, within MPMX26_02724
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 2,803,956 + +1.8 2,803,971 - +0.4 2,803,981 - -0.2 2,803,981 - +2.7 2,803,981 - +1.6 2,803,981 - -0.2 2,804,058 - MPMX26_02723 0.13 -0.5 2,804,215 + MPMX26_02723 0.34 +0.4 2,804,223 - MPMX26_02723 0.35 +2.6 2,804,270 - MPMX26_02723 0.42 +0.3 2,804,281 - MPMX26_02723 0.43 +0.7 2,804,299 - MPMX26_02723 0.46 +0.6 2,804,333 - MPMX26_02723 0.50 -0.2 2,804,343 - MPMX26_02723 0.52 -1.6 2,804,346 - MPMX26_02723 0.52 +2.2 2,804,366 - MPMX26_02723 0.55 -0.5 2,804,399 - MPMX26_02723 0.60 -1.2 2,804,465 + MPMX26_02723 0.69 +0.4 2,804,572 - MPMX26_02723 0.83 +1.8 2,804,573 - MPMX26_02723 0.83 -0.0 2,804,605 - MPMX26_02723 0.88 +1.1 2,804,605 - MPMX26_02723 0.88 +1.1 2,804,605 - MPMX26_02723 0.88 -1.6 2,804,902 + +0.6 2,804,930 + +0.6 2,804,930 + +0.3 2,804,930 + +0.2 2,804,986 + MPMX26_02724 0.11 -0.4 2,804,986 + MPMX26_02724 0.11 +0.7 2,804,986 + MPMX26_02724 0.11 -1.2 2,804,995 + MPMX26_02724 0.11 +0.4 2,804,995 + MPMX26_02724 0.11 -1.4 2,804,995 + MPMX26_02724 0.11 +0.6 2,804,995 + MPMX26_02724 0.11 +1.6 2,804,995 + MPMX26_02724 0.11 -2.0 2,804,995 + MPMX26_02724 0.11 -1.0 2,804,995 + MPMX26_02724 0.11 +0.4 2,805,003 - MPMX26_02724 0.12 +2.4 2,805,048 + MPMX26_02724 0.16 +0.3 2,805,048 + MPMX26_02724 0.16 +2.2 2,805,076 + MPMX26_02724 0.18 +0.9 2,805,076 + MPMX26_02724 0.18 +0.3 2,805,076 + MPMX26_02724 0.18 +0.2 2,805,076 + MPMX26_02724 0.18 -0.2 2,805,086 + MPMX26_02724 0.19 -0.5 2,805,086 + MPMX26_02724 0.19 +0.5 2,805,086 + MPMX26_02724 0.19 +0.8 2,805,086 + MPMX26_02724 0.19 -0.2 2,805,086 + MPMX26_02724 0.19 -0.9 2,805,159 + MPMX26_02724 0.25 +0.6 2,805,161 + MPMX26_02724 0.25 -0.2 2,805,161 + MPMX26_02724 0.25 +0.2 2,805,206 + MPMX26_02724 0.29 +0.6 2,805,329 + MPMX26_02724 0.39 +2.9 2,805,344 + MPMX26_02724 0.41 -0.1 2,805,353 + MPMX26_02724 0.41 +1.0 2,805,358 + MPMX26_02724 0.42 +0.1 2,805,358 + MPMX26_02724 0.42 +0.1 2,805,358 + MPMX26_02724 0.42 +0.3 2,805,397 + MPMX26_02724 0.45 +0.8 2,805,397 + MPMX26_02724 0.45 -0.3 2,805,397 + MPMX26_02724 0.45 -0.2 2,805,397 + MPMX26_02724 0.45 -1.4 2,805,397 + MPMX26_02724 0.45 +1.3 2,805,397 + MPMX26_02724 0.45 +0.3 2,805,397 + MPMX26_02724 0.45 +1.2 2,805,397 + MPMX26_02724 0.45 +0.4 2,805,473 + MPMX26_02724 0.52 +1.2 2,805,473 + MPMX26_02724 0.52 +1.0 2,805,481 - MPMX26_02724 0.52 +0.4 2,805,641 + MPMX26_02724 0.66 +1.0 2,805,680 + MPMX26_02724 0.69 +1.8
Or see this region's nucleotide sequence