Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02518

Experiment: L-Aspartic Acid (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02517 and MPMX26_02518 are separated by 39 nucleotidesMPMX26_02518 and MPMX26_02519 are separated by 29 nucleotides MPMX26_02517: MPMX26_02517 - Proline--tRNA ligase, at 2,602,700 to 2,604,415 _02517 MPMX26_02518: MPMX26_02518 - hypothetical protein, at 2,604,455 to 2,605,516 _02518 MPMX26_02519: MPMX26_02519 - hypothetical protein, at 2,605,546 to 2,607,822 _02519 Position (kb) 2604 2605 2606Strain fitness (log2 ratio) -1 0 1 2at 2604.490 kb on - strandat 2604.551 kb on - strandat 2604.582 kb on - strand, within MPMX26_02518at 2604.582 kb on - strand, within MPMX26_02518at 2604.623 kb on - strand, within MPMX26_02518at 2604.640 kb on - strand, within MPMX26_02518at 2605.260 kb on + strand, within MPMX26_02518at 2606.320 kb on - strand, within MPMX26_02519

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
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2,604,490 - +0.8
2,604,551 - +1.0
2,604,582 - MPMX26_02518 0.12 -0.4
2,604,582 - MPMX26_02518 0.12 +2.7
2,604,623 - MPMX26_02518 0.16 +0.8
2,604,640 - MPMX26_02518 0.17 +0.1
2,605,260 + MPMX26_02518 0.76 +0.4
2,606,320 - MPMX26_02519 0.34 -0.3

Or see this region's nucleotide sequence