Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01388

Experiment: L-Aspartic Acid (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01386 and MPMX26_01387 overlap by 7 nucleotidesMPMX26_01387 and MPMX26_01388 are separated by 8 nucleotidesMPMX26_01388 and MPMX26_01389 are separated by 109 nucleotidesMPMX26_01389 and MPMX26_01390 are separated by 105 nucleotides MPMX26_01386: MPMX26_01386 - hypothetical protein, at 1,448,571 to 1,449,068 _01386 MPMX26_01387: MPMX26_01387 - hypothetical protein, at 1,449,062 to 1,449,682 _01387 MPMX26_01388: MPMX26_01388 - hypothetical protein, at 1,449,691 to 1,449,879 _01388 MPMX26_01389: MPMX26_01389 - HTH-type transcriptional regulator PrtR, at 1,449,989 to 1,450,693 _01389 MPMX26_01390: MPMX26_01390 - hypothetical protein, at 1,450,799 to 1,450,987 _01390 Position (kb) 1449 1450Strain fitness (log2 ratio) -2 -1 0 1at 1449.775 kb on - strand, within MPMX26_01388at 1449.825 kb on - strand, within MPMX26_01388at 1449.835 kb on - strand, within MPMX26_01388at 1449.835 kb on - strand, within MPMX26_01388

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
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1,449,775 - MPMX26_01388 0.44 +0.5
1,449,825 - MPMX26_01388 0.71 -2.0
1,449,835 - MPMX26_01388 0.76 -0.3
1,449,835 - MPMX26_01388 0.76 -1.5

Or see this region's nucleotide sequence