Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01154

Experiment: L-Aspartic Acid (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01153 and MPMX26_01154 are separated by 687 nucleotidesMPMX26_01154 and MPMX26_01155 are separated by 190 nucleotidesMPMX26_01155 and MPMX26_01156 are separated by 8 nucleotidesMPMX26_01156 and MPMX26_01157 are separated by 11 nucleotides MPMX26_01153: MPMX26_01153 - Alanine racemase, at 1,220,012 to 1,221,082 _01153 MPMX26_01154: MPMX26_01154 - Replicative DNA helicase, at 1,221,770 to 1,223,215 _01154 MPMX26_01155: MPMX26_01155 - 50S ribosomal protein L9, at 1,223,406 to 1,223,852 _01155 MPMX26_01156: MPMX26_01156 - 30S ribosomal protein S18, at 1,223,861 to 1,224,088 _01156 MPMX26_01157: MPMX26_01157 - 30S ribosomal protein S6, at 1,224,100 to 1,224,486 _01157 Position (kb) 1221 1222 1223 1224Strain fitness (log2 ratio) -1 0 1 2 3at 1221.776 kb on - strandat 1221.812 kb on - strandat 1223.389 kb on - strandat 1223.445 kb on - strandat 1223.451 kb on - strand, within MPMX26_01155at 1223.490 kb on - strand, within MPMX26_01155at 1223.492 kb on - strand, within MPMX26_01155at 1223.547 kb on - strand, within MPMX26_01155at 1223.547 kb on - strand, within MPMX26_01155at 1223.547 kb on - strand, within MPMX26_01155at 1223.547 kb on - strand, within MPMX26_01155at 1223.547 kb on - strand, within MPMX26_01155at 1223.547 kb on - strand, within MPMX26_01155at 1223.547 kb on - strand, within MPMX26_01155at 1223.600 kb on - strand, within MPMX26_01155at 1223.660 kb on - strand, within MPMX26_01155at 1223.777 kb on - strand, within MPMX26_01155at 1223.783 kb on - strand, within MPMX26_01155

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
remove
1,221,776 - +0.9
1,221,812 - +1.8
1,223,389 - -0.1
1,223,445 - +2.5
1,223,451 - MPMX26_01155 0.10 +1.8
1,223,490 - MPMX26_01155 0.19 +1.3
1,223,492 - MPMX26_01155 0.19 +2.8
1,223,547 - MPMX26_01155 0.32 +1.1
1,223,547 - MPMX26_01155 0.32 +1.5
1,223,547 - MPMX26_01155 0.32 +0.9
1,223,547 - MPMX26_01155 0.32 +0.9
1,223,547 - MPMX26_01155 0.32 +1.5
1,223,547 - MPMX26_01155 0.32 +2.8
1,223,547 - MPMX26_01155 0.32 +1.3
1,223,600 - MPMX26_01155 0.43 +2.3
1,223,660 - MPMX26_01155 0.57 +0.9
1,223,777 - MPMX26_01155 0.83 +1.1
1,223,783 - MPMX26_01155 0.84 +1.3

Or see this region's nucleotide sequence