Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01152

Experiment: L-Aspartic Acid (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01151 and MPMX26_01152 are separated by 108 nucleotidesMPMX26_01152 and MPMX26_01153 are separated by 15 nucleotides MPMX26_01151: MPMX26_01151 - hypothetical protein, at 1,218,785 to 1,219,519 _01151 MPMX26_01152: MPMX26_01152 - hypothetical protein, at 1,219,628 to 1,219,996 _01152 MPMX26_01153: MPMX26_01153 - Alanine racemase, at 1,220,012 to 1,221,082 _01153 Position (kb) 1219 1220Strain fitness (log2 ratio) -3 -2 -1 0 1at 1219.675 kb on + strand, within MPMX26_01152at 1219.691 kb on + strand, within MPMX26_01152at 1219.696 kb on + strand, within MPMX26_01152at 1219.701 kb on + strand, within MPMX26_01152at 1219.749 kb on + strand, within MPMX26_01152at 1219.814 kb on + strand, within MPMX26_01152at 1219.985 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
remove
1,219,675 + MPMX26_01152 0.13 -0.5
1,219,691 + MPMX26_01152 0.17 +0.7
1,219,696 + MPMX26_01152 0.18 -0.4
1,219,701 + MPMX26_01152 0.20 +0.2
1,219,749 + MPMX26_01152 0.33 +0.9
1,219,814 + MPMX26_01152 0.50 +0.6
1,219,985 + -3.0

Or see this region's nucleotide sequence