Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01062

Experiment: L-Aspartic Acid (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01060 and MPMX26_01061 are separated by 2 nucleotidesMPMX26_01061 and MPMX26_01062 are separated by 159 nucleotidesMPMX26_01062 and MPMX26_01063 are separated by 204 nucleotidesMPMX26_01063 and MPMX26_01064 are separated by 59 nucleotides MPMX26_01060: MPMX26_01060 - hypothetical protein, at 1,124,652 to 1,126,739 _01060 MPMX26_01061: MPMX26_01061 - Lactoylglutathione lyase, at 1,126,742 to 1,127,143 _01061 MPMX26_01062: MPMX26_01062 - hypothetical protein, at 1,127,303 to 1,128,304 _01062 MPMX26_01063: MPMX26_01063 - 50S ribosomal protein L31, at 1,128,509 to 1,128,733 _01063 MPMX26_01064: MPMX26_01064 - hypothetical protein, at 1,128,793 to 1,130,913 _01064 Position (kb) 1127 1128 1129Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1126.506 kb on + strand, within MPMX26_01060at 1126.506 kb on + strand, within MPMX26_01060at 1126.639 kb on + strandat 1126.725 kb on + strandat 1126.751 kb on + strandat 1126.753 kb on + strandat 1126.762 kb on + strandat 1126.776 kb on + strandat 1126.776 kb on + strandat 1126.776 kb on + strandat 1126.795 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.839 kb on + strand, within MPMX26_01061at 1126.891 kb on + strand, within MPMX26_01061at 1126.891 kb on + strand, within MPMX26_01061at 1126.894 kb on + strand, within MPMX26_01061at 1126.896 kb on + strand, within MPMX26_01061at 1126.901 kb on + strand, within MPMX26_01061at 1126.901 kb on + strand, within MPMX26_01061at 1126.901 kb on + strand, within MPMX26_01061at 1126.903 kb on + strand, within MPMX26_01061at 1126.908 kb on + strand, within MPMX26_01061at 1126.935 kb on + strand, within MPMX26_01061at 1126.935 kb on + strand, within MPMX26_01061at 1126.945 kb on + strand, within MPMX26_01061at 1126.961 kb on + strand, within MPMX26_01061at 1126.973 kb on + strand, within MPMX26_01061at 1126.976 kb on + strand, within MPMX26_01061at 1126.982 kb on + strand, within MPMX26_01061at 1126.987 kb on + strand, within MPMX26_01061at 1127.019 kb on + strand, within MPMX26_01061at 1127.019 kb on + strand, within MPMX26_01061at 1127.022 kb on + strand, within MPMX26_01061at 1127.038 kb on + strand, within MPMX26_01061at 1127.048 kb on + strand, within MPMX26_01061at 1127.086 kb on + strand, within MPMX26_01061at 1127.101 kb on + strand, within MPMX26_01061at 1127.563 kb on + strand, within MPMX26_01062at 1127.912 kb on + strand, within MPMX26_01062at 1127.982 kb on + strand, within MPMX26_01062at 1128.026 kb on + strand, within MPMX26_01062at 1128.077 kb on + strand, within MPMX26_01062at 1128.077 kb on + strand, within MPMX26_01062at 1128.077 kb on + strand, within MPMX26_01062at 1128.077 kb on + strand, within MPMX26_01062at 1128.082 kb on + strand, within MPMX26_01062at 1128.082 kb on + strand, within MPMX26_01062at 1128.092 kb on + strand, within MPMX26_01062at 1128.092 kb on + strand, within MPMX26_01062at 1128.140 kb on + strand, within MPMX26_01062at 1128.140 kb on + strand, within MPMX26_01062at 1128.140 kb on + strand, within MPMX26_01062at 1128.181 kb on + strand, within MPMX26_01062at 1128.260 kb on + strandat 1128.260 kb on + strandat 1128.260 kb on + strandat 1128.260 kb on + strandat 1128.260 kb on + strandat 1128.263 kb on - strandat 1128.277 kb on + strandat 1128.277 kb on + strandat 1128.587 kb on + strand, within MPMX26_01063at 1128.661 kb on + strand, within MPMX26_01063at 1128.712 kb on + strandat 1128.722 kb on + strandat 1128.810 kb on - strandat 1128.975 kb on - strandat 1129.032 kb on - strand, within MPMX26_01064at 1129.032 kb on - strand, within MPMX26_01064at 1129.090 kb on - strand, within MPMX26_01064at 1129.107 kb on - strand, within MPMX26_01064at 1129.189 kb on - strand, within MPMX26_01064at 1129.244 kb on - strand, within MPMX26_01064at 1129.294 kb on - strand, within MPMX26_01064at 1129.302 kb on - strand, within MPMX26_01064

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
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1,126,506 + MPMX26_01060 0.89 +1.8
1,126,506 + MPMX26_01060 0.89 +2.5
1,126,639 + -0.7
1,126,725 + -1.1
1,126,751 + -0.5
1,126,753 + -0.3
1,126,762 + +1.3
1,126,776 + +0.0
1,126,776 + -1.9
1,126,776 + -0.5
1,126,795 + MPMX26_01061 0.13 -1.1
1,126,800 + MPMX26_01061 0.14 +0.2
1,126,800 + MPMX26_01061 0.14 +1.1
1,126,800 + MPMX26_01061 0.14 +0.7
1,126,800 + MPMX26_01061 0.14 +0.5
1,126,800 + MPMX26_01061 0.14 -0.9
1,126,800 + MPMX26_01061 0.14 +1.3
1,126,800 + MPMX26_01061 0.14 +3.6
1,126,839 + MPMX26_01061 0.24 -0.6
1,126,891 + MPMX26_01061 0.37 -0.9
1,126,891 + MPMX26_01061 0.37 +0.1
1,126,894 + MPMX26_01061 0.38 -0.4
1,126,896 + MPMX26_01061 0.38 -2.5
1,126,901 + MPMX26_01061 0.40 +0.4
1,126,901 + MPMX26_01061 0.40 -0.4
1,126,901 + MPMX26_01061 0.40 -0.6
1,126,903 + MPMX26_01061 0.40 -1.1
1,126,908 + MPMX26_01061 0.41 -2.5
1,126,935 + MPMX26_01061 0.48 -0.3
1,126,935 + MPMX26_01061 0.48 +1.8
1,126,945 + MPMX26_01061 0.50 -1.7
1,126,961 + MPMX26_01061 0.54 +1.1
1,126,973 + MPMX26_01061 0.57 -0.9
1,126,976 + MPMX26_01061 0.58 -0.3
1,126,982 + MPMX26_01061 0.60 +0.0
1,126,987 + MPMX26_01061 0.61 -1.0
1,127,019 + MPMX26_01061 0.69 +0.1
1,127,019 + MPMX26_01061 0.69 -0.2
1,127,022 + MPMX26_01061 0.70 -0.8
1,127,038 + MPMX26_01061 0.74 -0.2
1,127,048 + MPMX26_01061 0.76 -0.1
1,127,086 + MPMX26_01061 0.86 -0.4
1,127,101 + MPMX26_01061 0.89 -0.8
1,127,563 + MPMX26_01062 0.26 +1.0
1,127,912 + MPMX26_01062 0.61 +0.3
1,127,982 + MPMX26_01062 0.68 +0.1
1,128,026 + MPMX26_01062 0.72 +1.0
1,128,077 + MPMX26_01062 0.77 +0.1
1,128,077 + MPMX26_01062 0.77 -0.9
1,128,077 + MPMX26_01062 0.77 -0.6
1,128,077 + MPMX26_01062 0.77 +0.5
1,128,082 + MPMX26_01062 0.78 -0.3
1,128,082 + MPMX26_01062 0.78 +1.4
1,128,092 + MPMX26_01062 0.79 +0.4
1,128,092 + MPMX26_01062 0.79 +0.5
1,128,140 + MPMX26_01062 0.84 +0.3
1,128,140 + MPMX26_01062 0.84 -0.2
1,128,140 + MPMX26_01062 0.84 +0.9
1,128,181 + MPMX26_01062 0.88 +1.2
1,128,260 + +1.7
1,128,260 + +0.2
1,128,260 + -0.1
1,128,260 + -1.2
1,128,260 + -0.0
1,128,263 - -0.3
1,128,277 + +0.9
1,128,277 + -2.1
1,128,587 + MPMX26_01063 0.35 +1.2
1,128,661 + MPMX26_01063 0.68 +2.1
1,128,712 + +0.9
1,128,722 + +0.7
1,128,810 - -0.8
1,128,975 - -0.6
1,129,032 - MPMX26_01064 0.11 -0.5
1,129,032 - MPMX26_01064 0.11 -0.2
1,129,090 - MPMX26_01064 0.14 +0.2
1,129,107 - MPMX26_01064 0.15 -0.1
1,129,189 - MPMX26_01064 0.19 -0.9
1,129,244 - MPMX26_01064 0.21 -0.8
1,129,294 - MPMX26_01064 0.24 -0.3
1,129,302 - MPMX26_01064 0.24 +0.5

Or see this region's nucleotide sequence