Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00664 and MPMX26_00665 are separated by 14 nucleotides MPMX26_00665 and MPMX26_00666 are separated by 152 nucleotides MPMX26_00666 and MPMX26_00667 are separated by 180 nucleotides MPMX26_00667 and MPMX26_00668 are separated by 65 nucleotides
MPMX26_00664: MPMX26_00664 - hypothetical protein, at 708,209 to 709,168
_00664
MPMX26_00665: MPMX26_00665 - hypothetical protein, at 709,183 to 709,818
_00665
MPMX26_00666: MPMX26_00666 - Anhydromuropeptide permease, at 709,971 to 711,200
_00666
MPMX26_00667: MPMX26_00667 - hypothetical protein, at 711,381 to 711,734
_00667
MPMX26_00668: MPMX26_00668 - L-threonine 3-dehydrogenase, at 711,800 to 712,777
_00668
Position (kb) 709
710
711
712 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 709.015 kb on - strand, within MPMX26_00664 at 709.046 kb on - strand, within MPMX26_00664 at 709.046 kb on - strand, within MPMX26_00664 at 709.060 kb on - strand, within MPMX26_00664 at 709.070 kb on - strand, within MPMX26_00664 at 709.070 kb on - strand, within MPMX26_00664 at 709.091 kb on - strand at 709.112 kb on - strand at 709.112 kb on - strand at 709.227 kb on - strand at 709.227 kb on - strand at 709.227 kb on - strand at 709.227 kb on - strand at 709.227 kb on - strand at 709.290 kb on - strand, within MPMX26_00665 at 709.669 kb on - strand, within MPMX26_00665 at 709.675 kb on - strand, within MPMX26_00665 at 709.683 kb on - strand, within MPMX26_00665 at 709.693 kb on - strand, within MPMX26_00665 at 709.693 kb on - strand, within MPMX26_00665 at 709.693 kb on - strand, within MPMX26_00665 at 709.693 kb on - strand, within MPMX26_00665 at 709.726 kb on - strand, within MPMX26_00665 at 709.726 kb on - strand, within MPMX26_00665 at 709.726 kb on - strand, within MPMX26_00665 at 709.905 kb on + strand at 709.917 kb on + strand at 709.919 kb on + strand at 709.927 kb on + strand at 709.927 kb on + strand at 709.929 kb on + strand at 710.006 kb on + strand at 710.006 kb on + strand at 710.013 kb on + strand at 710.013 kb on + strand at 710.045 kb on + strand at 710.074 kb on + strand at 710.149 kb on + strand, within MPMX26_00666 at 710.166 kb on + strand, within MPMX26_00666 at 710.166 kb on + strand, within MPMX26_00666 at 710.205 kb on + strand, within MPMX26_00666 at 710.208 kb on + strand, within MPMX26_00666 at 710.208 kb on + strand, within MPMX26_00666 at 710.210 kb on + strand, within MPMX26_00666 at 710.210 kb on + strand, within MPMX26_00666 at 710.210 kb on + strand, within MPMX26_00666 at 710.445 kb on + strand, within MPMX26_00666 at 710.682 kb on + strand, within MPMX26_00666 at 710.793 kb on + strand, within MPMX26_00666
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 709,015 - MPMX26_00664 0.84 +0.8 709,046 - MPMX26_00664 0.87 -0.6 709,046 - MPMX26_00664 0.87 -2.0 709,060 - MPMX26_00664 0.89 +1.8 709,070 - MPMX26_00664 0.90 -1.2 709,070 - MPMX26_00664 0.90 -0.5 709,091 - -0.5 709,112 - +2.3 709,112 - +1.3 709,227 - +0.2 709,227 - +0.4 709,227 - +1.1 709,227 - -0.7 709,227 - -0.4 709,290 - MPMX26_00665 0.17 +0.9 709,669 - MPMX26_00665 0.76 +0.3 709,675 - MPMX26_00665 0.77 +0.8 709,683 - MPMX26_00665 0.79 -0.8 709,693 - MPMX26_00665 0.80 +0.2 709,693 - MPMX26_00665 0.80 +0.6 709,693 - MPMX26_00665 0.80 -0.3 709,693 - MPMX26_00665 0.80 -0.3 709,726 - MPMX26_00665 0.85 +1.8 709,726 - MPMX26_00665 0.85 +0.5 709,726 - MPMX26_00665 0.85 -0.0 709,905 + -0.0 709,917 + +0.5 709,919 + -0.1 709,927 + -0.6 709,927 + +0.1 709,929 + +0.0 710,006 + +0.5 710,006 + +0.4 710,013 + +3.2 710,013 + -0.5 710,045 + -1.3 710,074 + +1.2 710,149 + MPMX26_00666 0.14 -1.4 710,166 + MPMX26_00666 0.16 +1.2 710,166 + MPMX26_00666 0.16 +0.7 710,205 + MPMX26_00666 0.19 +0.5 710,208 + MPMX26_00666 0.19 -0.6 710,208 + MPMX26_00666 0.19 -1.2 710,210 + MPMX26_00666 0.19 +0.1 710,210 + MPMX26_00666 0.19 +1.6 710,210 + MPMX26_00666 0.19 +1.5 710,445 + MPMX26_00666 0.39 +1.8 710,682 + MPMX26_00666 0.58 +2.8 710,793 + MPMX26_00666 0.67 +0.7
Or see this region's nucleotide sequence