Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00552

Experiment: L-Aspartic Acid (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00549 and MPMX26_00550 are separated by 56 nucleotidesMPMX26_00550 and MPMX26_00551 are separated by 118 nucleotidesMPMX26_00551 and MPMX26_00552 are separated by 77 nucleotidesMPMX26_00552 and MPMX26_00553 are separated by 391 nucleotides MPMX26_00549: MPMX26_00549 - hypothetical protein, at 581,037 to 581,573 _00549 MPMX26_00550: MPMX26_00550 - hypothetical protein, at 581,630 to 581,881 _00550 MPMX26_00551: MPMX26_00551 - hypothetical protein, at 582,000 to 582,422 _00551 MPMX26_00552: MPMX26_00552 - Long-chain-fatty-acid--CoA ligase, at 582,500 to 584,143 _00552 MPMX26_00553: MPMX26_00553 - Threonine--tRNA ligase, at 584,535 to 586,457 _00553 Position (kb) 582 583 584 585Strain fitness (log2 ratio) -2 -1 0 1 2 3at 581.533 kb on + strandat 581.536 kb on + strandat 581.536 kb on - strandat 581.541 kb on - strandat 581.541 kb on - strandat 581.541 kb on - strandat 581.541 kb on - strandat 581.568 kb on + strandat 581.664 kb on + strand, within MPMX26_00550at 581.672 kb on - strand, within MPMX26_00550at 581.672 kb on - strand, within MPMX26_00550at 581.674 kb on + strand, within MPMX26_00550at 581.683 kb on - strand, within MPMX26_00550at 581.695 kb on - strand, within MPMX26_00550at 581.705 kb on + strand, within MPMX26_00550at 581.711 kb on - strand, within MPMX26_00550at 581.713 kb on - strand, within MPMX26_00550at 581.713 kb on - strand, within MPMX26_00550at 581.734 kb on + strand, within MPMX26_00550at 581.762 kb on + strand, within MPMX26_00550at 581.770 kb on - strand, within MPMX26_00550at 581.770 kb on - strand, within MPMX26_00550at 581.770 kb on - strand, within MPMX26_00550at 581.770 kb on - strand, within MPMX26_00550at 581.770 kb on - strand, within MPMX26_00550at 581.770 kb on - strand, within MPMX26_00550at 581.770 kb on - strand, within MPMX26_00550at 581.776 kb on - strand, within MPMX26_00550at 581.822 kb on - strand, within MPMX26_00550at 581.832 kb on - strand, within MPMX26_00550at 582.296 kb on - strand, within MPMX26_00551at 582.309 kb on - strand, within MPMX26_00551at 582.482 kb on - strandat 582.526 kb on - strandat 582.532 kb on - strandat 582.583 kb on - strandat 582.583 kb on - strandat 582.599 kb on - strandat 582.646 kb on - strandat 582.655 kb on - strandat 582.674 kb on - strand, within MPMX26_00552at 582.701 kb on - strand, within MPMX26_00552at 582.706 kb on - strand, within MPMX26_00552at 582.751 kb on - strand, within MPMX26_00552at 582.866 kb on - strand, within MPMX26_00552at 582.866 kb on - strand, within MPMX26_00552at 582.905 kb on - strand, within MPMX26_00552at 582.913 kb on - strand, within MPMX26_00552at 582.983 kb on - strand, within MPMX26_00552at 582.988 kb on - strand, within MPMX26_00552at 582.993 kb on - strand, within MPMX26_00552at 583.036 kb on - strand, within MPMX26_00552at 583.045 kb on - strand, within MPMX26_00552at 583.082 kb on - strand, within MPMX26_00552at 583.082 kb on - strand, within MPMX26_00552at 583.089 kb on + strand, within MPMX26_00552at 583.213 kb on - strand, within MPMX26_00552at 583.222 kb on - strand, within MPMX26_00552at 583.232 kb on - strand, within MPMX26_00552at 583.232 kb on - strand, within MPMX26_00552at 583.232 kb on - strand, within MPMX26_00552at 583.289 kb on - strand, within MPMX26_00552at 583.289 kb on - strand, within MPMX26_00552at 583.360 kb on + strand, within MPMX26_00552at 583.389 kb on - strand, within MPMX26_00552at 583.394 kb on - strand, within MPMX26_00552at 583.399 kb on - strand, within MPMX26_00552at 583.420 kb on - strand, within MPMX26_00552at 583.517 kb on - strand, within MPMX26_00552at 583.517 kb on - strand, within MPMX26_00552at 583.522 kb on - strand, within MPMX26_00552at 583.553 kb on - strand, within MPMX26_00552at 583.553 kb on - strand, within MPMX26_00552at 583.553 kb on - strand, within MPMX26_00552at 583.553 kb on - strand, within MPMX26_00552at 583.553 kb on - strand, within MPMX26_00552at 583.580 kb on - strand, within MPMX26_00552at 583.580 kb on - strand, within MPMX26_00552at 583.580 kb on - strand, within MPMX26_00552at 583.585 kb on - strand, within MPMX26_00552at 583.590 kb on - strand, within MPMX26_00552at 583.603 kb on - strand, within MPMX26_00552at 583.642 kb on - strand, within MPMX26_00552at 583.651 kb on - strand, within MPMX26_00552at 583.739 kb on - strand, within MPMX26_00552at 583.784 kb on - strand, within MPMX26_00552at 583.864 kb on - strand, within MPMX26_00552at 583.864 kb on - strand, within MPMX26_00552at 583.864 kb on - strand, within MPMX26_00552at 583.864 kb on - strand, within MPMX26_00552at 583.864 kb on - strand, within MPMX26_00552at 583.864 kb on - strand, within MPMX26_00552at 583.864 kb on - strand, within MPMX26_00552at 583.864 kb on - strand, within MPMX26_00552at 583.864 kb on - strand, within MPMX26_00552at 583.864 kb on - strand, within MPMX26_00552at 584.005 kb on - strandat 584.020 kb on - strandat 584.020 kb on - strandat 584.020 kb on - strandat 584.057 kb on - strandat 584.057 kb on - strandat 584.062 kb on - strandat 584.062 kb on - strandat 584.062 kb on - strandat 584.086 kb on - strandat 584.086 kb on - strandat 584.175 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
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581,533 + +1.1
581,536 + -0.5
581,536 - -0.4
581,541 - +1.1
581,541 - +1.0
581,541 - +0.8
581,541 - +2.6
581,568 + -1.9
581,664 + MPMX26_00550 0.13 +0.6
581,672 - MPMX26_00550 0.17 -0.8
581,672 - MPMX26_00550 0.17 -0.2
581,674 + MPMX26_00550 0.17 -0.8
581,683 - MPMX26_00550 0.21 +1.3
581,695 - MPMX26_00550 0.26 +0.3
581,705 + MPMX26_00550 0.30 +1.4
581,711 - MPMX26_00550 0.32 +1.2
581,713 - MPMX26_00550 0.33 -0.3
581,713 - MPMX26_00550 0.33 +0.1
581,734 + MPMX26_00550 0.41 +3.0
581,762 + MPMX26_00550 0.52 +1.1
581,770 - MPMX26_00550 0.56 -0.1
581,770 - MPMX26_00550 0.56 -1.4
581,770 - MPMX26_00550 0.56 +0.9
581,770 - MPMX26_00550 0.56 -0.6
581,770 - MPMX26_00550 0.56 -0.5
581,770 - MPMX26_00550 0.56 -0.0
581,770 - MPMX26_00550 0.56 +0.6
581,776 - MPMX26_00550 0.58 +0.8
581,822 - MPMX26_00550 0.76 -0.3
581,832 - MPMX26_00550 0.80 +0.2
582,296 - MPMX26_00551 0.70 +1.0
582,309 - MPMX26_00551 0.73 +1.6
582,482 - -0.1
582,526 - +1.1
582,532 - +0.8
582,583 - +0.1
582,583 - +1.7
582,599 - -0.3
582,646 - +0.2
582,655 - +1.1
582,674 - MPMX26_00552 0.11 +2.9
582,701 - MPMX26_00552 0.12 +0.6
582,706 - MPMX26_00552 0.13 +1.6
582,751 - MPMX26_00552 0.15 +1.6
582,866 - MPMX26_00552 0.22 +0.2
582,866 - MPMX26_00552 0.22 -1.3
582,905 - MPMX26_00552 0.25 +1.7
582,913 - MPMX26_00552 0.25 +1.4
582,983 - MPMX26_00552 0.29 +1.3
582,988 - MPMX26_00552 0.30 -0.6
582,993 - MPMX26_00552 0.30 +0.1
583,036 - MPMX26_00552 0.33 +1.7
583,045 - MPMX26_00552 0.33 +2.3
583,082 - MPMX26_00552 0.35 -0.3
583,082 - MPMX26_00552 0.35 +0.7
583,089 + MPMX26_00552 0.36 +2.0
583,213 - MPMX26_00552 0.43 -1.7
583,222 - MPMX26_00552 0.44 +1.0
583,232 - MPMX26_00552 0.45 -0.4
583,232 - MPMX26_00552 0.45 -0.4
583,232 - MPMX26_00552 0.45 -2.4
583,289 - MPMX26_00552 0.48 +1.3
583,289 - MPMX26_00552 0.48 -1.1
583,360 + MPMX26_00552 0.52 +1.2
583,389 - MPMX26_00552 0.54 +0.4
583,394 - MPMX26_00552 0.54 -0.6
583,399 - MPMX26_00552 0.55 +0.6
583,420 - MPMX26_00552 0.56 -0.3
583,517 - MPMX26_00552 0.62 -0.6
583,517 - MPMX26_00552 0.62 +0.4
583,522 - MPMX26_00552 0.62 +0.3
583,553 - MPMX26_00552 0.64 -0.8
583,553 - MPMX26_00552 0.64 +0.8
583,553 - MPMX26_00552 0.64 -0.4
583,553 - MPMX26_00552 0.64 -0.1
583,553 - MPMX26_00552 0.64 +0.5
583,580 - MPMX26_00552 0.66 +0.1
583,580 - MPMX26_00552 0.66 +1.1
583,580 - MPMX26_00552 0.66 +1.1
583,585 - MPMX26_00552 0.66 +2.1
583,590 - MPMX26_00552 0.66 +1.3
583,603 - MPMX26_00552 0.67 +0.6
583,642 - MPMX26_00552 0.69 -0.4
583,651 - MPMX26_00552 0.70 +0.6
583,739 - MPMX26_00552 0.75 +2.1
583,784 - MPMX26_00552 0.78 +2.6
583,864 - MPMX26_00552 0.83 +2.6
583,864 - MPMX26_00552 0.83 +1.6
583,864 - MPMX26_00552 0.83 -0.7
583,864 - MPMX26_00552 0.83 -1.8
583,864 - MPMX26_00552 0.83 +1.6
583,864 - MPMX26_00552 0.83 +0.4
583,864 - MPMX26_00552 0.83 +1.6
583,864 - MPMX26_00552 0.83 +0.7
583,864 - MPMX26_00552 0.83 +1.8
583,864 - MPMX26_00552 0.83 +1.0
584,005 - -0.9
584,020 - +2.6
584,020 - -0.3
584,020 - +0.1
584,057 - -1.2
584,057 - -0.6
584,062 - -0.3
584,062 - +0.5
584,062 - -0.0
584,086 - +1.3
584,086 - -1.2
584,175 - +0.3

Or see this region's nucleotide sequence