Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00175

Experiment: L-Aspartic Acid (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00174 and MPMX26_00175 are separated by 5 nucleotidesMPMX26_00175 and MPMX26_00176 are separated by 68 nucleotidesMPMX26_00176 and MPMX26_00177 are separated by 67 nucleotides MPMX26_00174: MPMX26_00174 - putative peptidoglycan glycosyltransferase FtsW, at 188,573 to 189,769 _00174 MPMX26_00175: MPMX26_00175 - hypothetical protein, at 189,775 to 190,005 _00175 MPMX26_00176: MPMX26_00176 - Glutamyl-Q tRNA(Asp) synthetase, at 190,074 to 190,928 _00176 MPMX26_00177: MPMX26_00177 - RNA polymerase-binding transcription factor DksA, at 190,996 to 191,529 _00177 Position (kb) 189 190 191Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 189.723 kb on + strandat 189.723 kb on + strandat 189.723 kb on + strandat 189.726 kb on + strandat 189.736 kb on + strandat 189.798 kb on - strand, within MPMX26_00175at 189.853 kb on - strand, within MPMX26_00175at 189.853 kb on - strand, within MPMX26_00175at 189.870 kb on - strand, within MPMX26_00175at 189.870 kb on - strand, within MPMX26_00175at 189.906 kb on + strand, within MPMX26_00175at 190.033 kb on - strandat 190.033 kb on - strandat 190.033 kb on - strandat 190.033 kb on - strandat 190.110 kb on - strandat 190.121 kb on - strandat 190.121 kb on - strandat 190.128 kb on - strandat 190.133 kb on - strandat 190.273 kb on - strand, within MPMX26_00176at 190.279 kb on - strand, within MPMX26_00176at 190.309 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.316 kb on - strand, within MPMX26_00176at 190.316 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.378 kb on - strand, within MPMX26_00176at 190.399 kb on - strand, within MPMX26_00176at 190.407 kb on - strand, within MPMX26_00176at 190.426 kb on - strand, within MPMX26_00176at 190.428 kb on - strand, within MPMX26_00176at 190.428 kb on - strand, within MPMX26_00176at 190.447 kb on - strand, within MPMX26_00176at 190.459 kb on - strand, within MPMX26_00176at 190.498 kb on - strand, within MPMX26_00176at 190.535 kb on - strand, within MPMX26_00176at 190.535 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.616 kb on - strand, within MPMX26_00176at 190.655 kb on - strand, within MPMX26_00176at 190.656 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.767 kb on - strand, within MPMX26_00176at 190.767 kb on - strand, within MPMX26_00176at 190.773 kb on - strand, within MPMX26_00176at 190.773 kb on - strand, within MPMX26_00176at 190.774 kb on - strand, within MPMX26_00176at 190.783 kb on - strand, within MPMX26_00176at 190.783 kb on - strand, within MPMX26_00176at 190.783 kb on - strand, within MPMX26_00176at 190.834 kb on - strand, within MPMX26_00176at 190.836 kb on - strand, within MPMX26_00176at 190.846 kb on - strandat 190.876 kb on - strandat 190.881 kb on - strandat 190.911 kb on - strandat 190.920 kb on - strandat 190.920 kb on - strandat 190.921 kb on - strandat 190.935 kb on - strandat 190.971 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (N)
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189,723 + -0.5
189,723 + -2.5
189,723 + -0.6
189,726 + +0.0
189,736 + -0.6
189,798 - MPMX26_00175 0.10 +0.9
189,853 - MPMX26_00175 0.34 +1.6
189,853 - MPMX26_00175 0.34 -0.0
189,870 - MPMX26_00175 0.41 +1.1
189,870 - MPMX26_00175 0.41 +1.3
189,906 + MPMX26_00175 0.57 +1.4
190,033 - -0.0
190,033 - +1.1
190,033 - +1.3
190,033 - +0.1
190,110 - -0.8
190,121 - +0.2
190,121 - -0.1
190,128 - -0.7
190,133 - -1.0
190,273 - MPMX26_00176 0.23 -0.9
190,279 - MPMX26_00176 0.24 +0.9
190,309 - MPMX26_00176 0.27 +0.1
190,311 - MPMX26_00176 0.28 -0.3
190,311 - MPMX26_00176 0.28 -1.0
190,311 - MPMX26_00176 0.28 +0.8
190,311 - MPMX26_00176 0.28 -1.2
190,316 - MPMX26_00176 0.28 +0.5
190,316 - MPMX26_00176 0.28 +0.6
190,321 - MPMX26_00176 0.29 -0.1
190,321 - MPMX26_00176 0.29 -0.0
190,321 - MPMX26_00176 0.29 +1.0
190,321 - MPMX26_00176 0.29 -0.3
190,321 - MPMX26_00176 0.29 +1.0
190,321 - MPMX26_00176 0.29 +1.1
190,321 - MPMX26_00176 0.29 +0.6
190,321 - MPMX26_00176 0.29 +0.1
190,321 - MPMX26_00176 0.29 +0.6
190,326 - MPMX26_00176 0.29 +0.4
190,326 - MPMX26_00176 0.29 -1.1
190,326 - MPMX26_00176 0.29 -0.4
190,326 - MPMX26_00176 0.29 -0.7
190,326 - MPMX26_00176 0.29 -1.1
190,326 - MPMX26_00176 0.29 -0.6
190,331 - MPMX26_00176 0.30 -0.3
190,331 - MPMX26_00176 0.30 -0.3
190,331 - MPMX26_00176 0.30 +1.6
190,331 - MPMX26_00176 0.30 +0.1
190,331 - MPMX26_00176 0.30 +0.3
190,331 - MPMX26_00176 0.30 -0.2
190,331 - MPMX26_00176 0.30 -0.2
190,331 - MPMX26_00176 0.30 -1.2
190,331 - MPMX26_00176 0.30 -0.8
190,331 - MPMX26_00176 0.30 +0.3
190,331 - MPMX26_00176 0.30 -1.7
190,336 - MPMX26_00176 0.31 +0.3
190,336 - MPMX26_00176 0.31 -0.9
190,336 - MPMX26_00176 0.31 -1.4
190,336 - MPMX26_00176 0.31 +0.4
190,336 - MPMX26_00176 0.31 -0.1
190,336 - MPMX26_00176 0.31 -1.1
190,336 - MPMX26_00176 0.31 -0.5
190,336 - MPMX26_00176 0.31 +1.3
190,378 - MPMX26_00176 0.36 -0.9
190,399 - MPMX26_00176 0.38 -1.8
190,407 - MPMX26_00176 0.39 -0.5
190,426 - MPMX26_00176 0.41 -2.8
190,428 - MPMX26_00176 0.41 -0.2
190,428 - MPMX26_00176 0.41 -0.9
190,447 - MPMX26_00176 0.44 +0.1
190,459 - MPMX26_00176 0.45 +0.4
190,498 - MPMX26_00176 0.50 +0.0
190,535 - MPMX26_00176 0.54 -0.5
190,535 - MPMX26_00176 0.54 -0.5
190,555 - MPMX26_00176 0.56 -0.2
190,555 - MPMX26_00176 0.56 +2.3
190,555 - MPMX26_00176 0.56 +1.1
190,555 - MPMX26_00176 0.56 -1.0
190,555 - MPMX26_00176 0.56 +0.6
190,611 - MPMX26_00176 0.63 -0.8
190,611 - MPMX26_00176 0.63 +0.1
190,611 - MPMX26_00176 0.63 -0.1
190,611 - MPMX26_00176 0.63 +0.4
190,611 - MPMX26_00176 0.63 +1.1
190,616 - MPMX26_00176 0.63 -0.3
190,655 - MPMX26_00176 0.68 -0.3
190,656 - MPMX26_00176 0.68 -0.1
190,757 - MPMX26_00176 0.80 +2.1
190,757 - MPMX26_00176 0.80 -0.4
190,757 - MPMX26_00176 0.80 -0.9
190,757 - MPMX26_00176 0.80 -0.4
190,757 - MPMX26_00176 0.80 -0.3
190,767 - MPMX26_00176 0.81 -0.4
190,767 - MPMX26_00176 0.81 +0.7
190,773 - MPMX26_00176 0.82 -0.1
190,773 - MPMX26_00176 0.82 +0.3
190,774 - MPMX26_00176 0.82 +1.1
190,783 - MPMX26_00176 0.83 +0.6
190,783 - MPMX26_00176 0.83 -0.7
190,783 - MPMX26_00176 0.83 +1.4
190,834 - MPMX26_00176 0.89 +0.5
190,836 - MPMX26_00176 0.89 -0.9
190,846 - -0.2
190,876 - +0.3
190,881 - -0.2
190,911 - +0.8
190,920 - -0.6
190,920 - -0.9
190,921 - -1.9
190,935 - -0.5
190,971 - +0.4

Or see this region's nucleotide sequence