Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02465

Experiment: Pustulan (b-1-6 glucan) 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02464 and BACOVA_02465 are separated by 11 nucleotidesBACOVA_02465 and BACOVA_02466 are separated by 109 nucleotides BACOVA_02464: BACOVA_02464 - glycosyltransferase, group 1 family protein, at 226,956 to 228,092 _02464 BACOVA_02465: BACOVA_02465 - bacterial transferase hexapeptide repeat protein, at 228,104 to 228,652 _02465 BACOVA_02466: BACOVA_02466 - glycosyltransferase, group 1 family protein, at 228,762 to 229,883 _02466 Position (kb) 228 229Strain fitness (log2 ratio) -2 -1 0 1 2 3at 227.130 kb on - strand, within BACOVA_02464at 227.137 kb on - strand, within BACOVA_02464at 227.180 kb on - strand, within BACOVA_02464at 227.198 kb on - strand, within BACOVA_02464at 227.198 kb on - strand, within BACOVA_02464at 227.282 kb on - strand, within BACOVA_02464at 227.292 kb on - strand, within BACOVA_02464at 227.308 kb on - strand, within BACOVA_02464at 227.392 kb on - strand, within BACOVA_02464at 227.435 kb on - strand, within BACOVA_02464at 227.435 kb on - strand, within BACOVA_02464at 227.499 kb on - strand, within BACOVA_02464at 227.499 kb on - strand, within BACOVA_02464at 227.501 kb on - strand, within BACOVA_02464at 227.501 kb on - strand, within BACOVA_02464at 227.501 kb on - strand, within BACOVA_02464at 227.539 kb on - strand, within BACOVA_02464at 227.578 kb on - strand, within BACOVA_02464at 227.578 kb on - strand, within BACOVA_02464at 227.578 kb on - strand, within BACOVA_02464at 227.578 kb on - strand, within BACOVA_02464at 227.704 kb on - strand, within BACOVA_02464at 227.808 kb on - strand, within BACOVA_02464at 227.823 kb on - strand, within BACOVA_02464at 227.834 kb on - strand, within BACOVA_02464at 227.898 kb on - strand, within BACOVA_02464at 227.900 kb on - strand, within BACOVA_02464at 227.900 kb on - strand, within BACOVA_02464at 227.903 kb on - strand, within BACOVA_02464at 227.903 kb on - strand, within BACOVA_02464at 227.910 kb on - strand, within BACOVA_02464at 227.953 kb on - strand, within BACOVA_02464at 227.953 kb on - strand, within BACOVA_02464at 228.096 kb on - strandat 228.144 kb on - strandat 228.158 kb on - strandat 228.160 kb on - strand, within BACOVA_02465at 228.160 kb on - strand, within BACOVA_02465at 228.205 kb on - strand, within BACOVA_02465at 228.205 kb on - strand, within BACOVA_02465at 228.254 kb on + strand, within BACOVA_02465at 228.257 kb on - strand, within BACOVA_02465at 228.257 kb on - strand, within BACOVA_02465at 228.281 kb on - strand, within BACOVA_02465at 228.283 kb on - strand, within BACOVA_02465at 228.291 kb on - strand, within BACOVA_02465at 228.291 kb on - strand, within BACOVA_02465at 228.291 kb on - strand, within BACOVA_02465at 228.335 kb on - strand, within BACOVA_02465at 228.337 kb on - strand, within BACOVA_02465at 228.350 kb on - strand, within BACOVA_02465at 228.380 kb on - strand, within BACOVA_02465at 228.440 kb on - strand, within BACOVA_02465at 228.450 kb on - strand, within BACOVA_02465at 228.481 kb on - strand, within BACOVA_02465at 228.481 kb on - strand, within BACOVA_02465at 228.496 kb on - strand, within BACOVA_02465at 228.496 kb on - strand, within BACOVA_02465at 228.496 kb on - strand, within BACOVA_02465at 228.552 kb on - strand, within BACOVA_02465at 228.612 kb on - strandat 228.612 kb on - strandat 228.619 kb on + strandat 228.620 kb on - strandat 228.621 kb on + strandat 228.640 kb on - strandat 228.646 kb on - strandat 228.670 kb on + strandat 228.690 kb on + strandat 228.690 kb on + strandat 228.692 kb on + strandat 228.693 kb on - strandat 228.694 kb on + strandat 228.695 kb on - strandat 228.696 kb on + strandat 228.712 kb on + strandat 228.727 kb on + strandat 228.728 kb on - strandat 228.831 kb on - strandat 228.888 kb on - strand, within BACOVA_02466at 228.888 kb on - strand, within BACOVA_02466at 228.969 kb on - strand, within BACOVA_02466at 228.969 kb on - strand, within BACOVA_02466at 228.984 kb on - strand, within BACOVA_02466at 228.990 kb on - strand, within BACOVA_02466at 229.004 kb on - strand, within BACOVA_02466at 229.020 kb on - strand, within BACOVA_02466at 229.047 kb on + strand, within BACOVA_02466at 229.059 kb on - strand, within BACOVA_02466at 229.059 kb on - strand, within BACOVA_02466at 229.062 kb on - strand, within BACOVA_02466at 229.066 kb on - strand, within BACOVA_02466at 229.066 kb on - strand, within BACOVA_02466at 229.114 kb on - strand, within BACOVA_02466at 229.114 kb on - strand, within BACOVA_02466at 229.116 kb on - strand, within BACOVA_02466at 229.148 kb on - strand, within BACOVA_02466at 229.152 kb on - strand, within BACOVA_02466at 229.154 kb on - strand, within BACOVA_02466at 229.161 kb on - strand, within BACOVA_02466at 229.176 kb on - strand, within BACOVA_02466at 229.185 kb on - strand, within BACOVA_02466at 229.185 kb on - strand, within BACOVA_02466at 229.218 kb on - strand, within BACOVA_02466at 229.218 kb on - strand, within BACOVA_02466at 229.227 kb on - strand, within BACOVA_02466at 229.289 kb on - strand, within BACOVA_02466at 229.314 kb on - strand, within BACOVA_02466at 229.338 kb on - strand, within BACOVA_02466at 229.338 kb on - strand, within BACOVA_02466at 229.362 kb on - strand, within BACOVA_02466at 229.368 kb on - strand, within BACOVA_02466at 229.368 kb on - strand, within BACOVA_02466at 229.412 kb on - strand, within BACOVA_02466at 229.412 kb on - strand, within BACOVA_02466at 229.457 kb on + strand, within BACOVA_02466at 229.458 kb on - strand, within BACOVA_02466at 229.464 kb on - strand, within BACOVA_02466at 229.515 kb on - strand, within BACOVA_02466at 229.517 kb on - strand, within BACOVA_02466at 229.536 kb on - strand, within BACOVA_02466at 229.555 kb on + strand, within BACOVA_02466at 229.556 kb on - strand, within BACOVA_02466at 229.556 kb on - strand, within BACOVA_02466at 229.595 kb on - strand, within BACOVA_02466at 229.629 kb on - strand, within BACOVA_02466at 229.647 kb on - strand, within BACOVA_02466

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Per-strain Table

Position Strand Gene LocusTag Fraction Pustulan (b-1-6 glucan) 2.5 mg/mL (C)
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227,130 - BACOVA_02464 0.15 +2.4
227,137 - BACOVA_02464 0.16 +1.5
227,180 - BACOVA_02464 0.20 +0.3
227,198 - BACOVA_02464 0.21 +2.5
227,198 - BACOVA_02464 0.21 +1.2
227,282 - BACOVA_02464 0.29 +1.7
227,292 - BACOVA_02464 0.30 +1.3
227,308 - BACOVA_02464 0.31 +0.8
227,392 - BACOVA_02464 0.38 +3.5
227,435 - BACOVA_02464 0.42 +1.2
227,435 - BACOVA_02464 0.42 +0.4
227,499 - BACOVA_02464 0.48 -0.6
227,499 - BACOVA_02464 0.48 +0.9
227,501 - BACOVA_02464 0.48 +1.1
227,501 - BACOVA_02464 0.48 +0.4
227,501 - BACOVA_02464 0.48 +1.3
227,539 - BACOVA_02464 0.51 +2.1
227,578 - BACOVA_02464 0.55 +0.6
227,578 - BACOVA_02464 0.55 +0.9
227,578 - BACOVA_02464 0.55 +0.7
227,578 - BACOVA_02464 0.55 -0.6
227,704 - BACOVA_02464 0.66 -0.7
227,808 - BACOVA_02464 0.75 +1.1
227,823 - BACOVA_02464 0.76 +2.2
227,834 - BACOVA_02464 0.77 +1.1
227,898 - BACOVA_02464 0.83 -0.0
227,900 - BACOVA_02464 0.83 +1.7
227,900 - BACOVA_02464 0.83 +1.1
227,903 - BACOVA_02464 0.83 -0.8
227,903 - BACOVA_02464 0.83 +2.0
227,910 - BACOVA_02464 0.84 +1.6
227,953 - BACOVA_02464 0.88 +2.6
227,953 - BACOVA_02464 0.88 +2.9
228,096 - +0.5
228,144 - +2.2
228,158 - +0.2
228,160 - BACOVA_02465 0.10 +2.0
228,160 - BACOVA_02465 0.10 +0.8
228,205 - BACOVA_02465 0.18 +1.3
228,205 - BACOVA_02465 0.18 -0.4
228,254 + BACOVA_02465 0.27 +0.6
228,257 - BACOVA_02465 0.28 +2.7
228,257 - BACOVA_02465 0.28 +0.7
228,281 - BACOVA_02465 0.32 +0.3
228,283 - BACOVA_02465 0.33 -0.1
228,291 - BACOVA_02465 0.34 -0.7
228,291 - BACOVA_02465 0.34 +0.5
228,291 - BACOVA_02465 0.34 +2.0
228,335 - BACOVA_02465 0.42 +2.6
228,337 - BACOVA_02465 0.42 -0.3
228,350 - BACOVA_02465 0.45 -0.8
228,380 - BACOVA_02465 0.50 +2.6
228,440 - BACOVA_02465 0.61 -0.3
228,450 - BACOVA_02465 0.63 +2.1
228,481 - BACOVA_02465 0.69 +0.6
228,481 - BACOVA_02465 0.69 +0.2
228,496 - BACOVA_02465 0.71 +0.5
228,496 - BACOVA_02465 0.71 -2.1
228,496 - BACOVA_02465 0.71 +2.0
228,552 - BACOVA_02465 0.82 +1.7
228,612 - -0.9
228,612 - +3.7
228,619 + +1.8
228,620 - +0.5
228,621 + +0.2
228,640 - +2.7
228,646 - +1.3
228,670 + -0.0
228,690 + +0.8
228,690 + +2.2
228,692 + +2.0
228,693 - +1.8
228,694 + +1.4
228,695 - +2.3
228,696 + +1.2
228,712 + +1.6
228,727 + +0.3
228,728 - -1.2
228,831 - -0.5
228,888 - BACOVA_02466 0.11 +1.0
228,888 - BACOVA_02466 0.11 +1.3
228,969 - BACOVA_02466 0.18 +1.7
228,969 - BACOVA_02466 0.18 +0.3
228,984 - BACOVA_02466 0.20 +1.8
228,990 - BACOVA_02466 0.20 +0.8
229,004 - BACOVA_02466 0.22 +1.2
229,020 - BACOVA_02466 0.23 +1.5
229,047 + BACOVA_02466 0.25 -0.2
229,059 - BACOVA_02466 0.26 +3.2
229,059 - BACOVA_02466 0.26 +2.0
229,062 - BACOVA_02466 0.27 +0.7
229,066 - BACOVA_02466 0.27 +0.6
229,066 - BACOVA_02466 0.27 +2.3
229,114 - BACOVA_02466 0.31 +1.7
229,114 - BACOVA_02466 0.31 -0.2
229,116 - BACOVA_02466 0.32 +1.6
229,148 - BACOVA_02466 0.34 -0.8
229,152 - BACOVA_02466 0.35 -0.0
229,154 - BACOVA_02466 0.35 -0.0
229,161 - BACOVA_02466 0.36 -0.8
229,176 - BACOVA_02466 0.37 +0.5
229,185 - BACOVA_02466 0.38 +1.6
229,185 - BACOVA_02466 0.38 +1.2
229,218 - BACOVA_02466 0.41 +0.1
229,218 - BACOVA_02466 0.41 +1.5
229,227 - BACOVA_02466 0.41 +2.0
229,289 - BACOVA_02466 0.47 +1.0
229,314 - BACOVA_02466 0.49 +1.6
229,338 - BACOVA_02466 0.51 -0.7
229,338 - BACOVA_02466 0.51 -0.2
229,362 - BACOVA_02466 0.53 +1.3
229,368 - BACOVA_02466 0.54 -1.4
229,368 - BACOVA_02466 0.54 +1.2
229,412 - BACOVA_02466 0.58 +1.8
229,412 - BACOVA_02466 0.58 +0.6
229,457 + BACOVA_02466 0.62 +2.0
229,458 - BACOVA_02466 0.62 +0.9
229,464 - BACOVA_02466 0.63 +1.7
229,515 - BACOVA_02466 0.67 +2.7
229,517 - BACOVA_02466 0.67 +1.2
229,536 - BACOVA_02466 0.69 -0.4
229,555 + BACOVA_02466 0.71 +1.2
229,556 - BACOVA_02466 0.71 +1.3
229,556 - BACOVA_02466 0.71 -0.2
229,595 - BACOVA_02466 0.74 -1.1
229,629 - BACOVA_02466 0.77 +1.5
229,647 - BACOVA_02466 0.79 -0.6

Or see this region's nucleotide sequence