Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00759

Experiment: Pustulan (b-1-6 glucan) 2.5 mg/mL (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBACOVA_00758 and BACOVA_00759 are separated by 145 nucleotidesBACOVA_00759 and BACOVA_00760 overlap by 17 nucleotides BACOVA_00758: BACOVA_00758 - hypothetical protein, at 436,228 to 437,214 _00758 BACOVA_00759: BACOVA_00759 - hypothetical protein, at 437,360 to 438,421 _00759 BACOVA_00760: BACOVA_00760 - ABC-2 type transporter, at 438,405 to 439,589 _00760 Position (kb) 437 438 439Strain fitness (log2 ratio) -2 -1 0 1 2 3at 436.369 kb on - strand, within BACOVA_00758at 436.440 kb on + strand, within BACOVA_00758at 436.458 kb on + strand, within BACOVA_00758at 436.458 kb on + strand, within BACOVA_00758at 436.459 kb on - strand, within BACOVA_00758at 436.470 kb on - strand, within BACOVA_00758at 436.470 kb on - strand, within BACOVA_00758at 436.532 kb on + strand, within BACOVA_00758at 436.533 kb on - strand, within BACOVA_00758at 436.621 kb on + strand, within BACOVA_00758at 436.621 kb on + strand, within BACOVA_00758at 436.622 kb on - strand, within BACOVA_00758at 436.629 kb on + strand, within BACOVA_00758at 436.636 kb on - strand, within BACOVA_00758at 436.641 kb on - strand, within BACOVA_00758at 436.643 kb on - strand, within BACOVA_00758at 436.645 kb on - strand, within BACOVA_00758at 436.645 kb on - strand, within BACOVA_00758at 436.682 kb on + strand, within BACOVA_00758at 436.690 kb on - strand, within BACOVA_00758at 436.693 kb on + strand, within BACOVA_00758at 436.694 kb on - strand, within BACOVA_00758at 436.694 kb on - strand, within BACOVA_00758at 436.694 kb on - strand, within BACOVA_00758at 436.748 kb on + strand, within BACOVA_00758at 436.749 kb on - strand, within BACOVA_00758at 436.749 kb on - strand, within BACOVA_00758at 436.770 kb on + strand, within BACOVA_00758at 436.950 kb on + strand, within BACOVA_00758at 436.951 kb on - strand, within BACOVA_00758at 436.952 kb on + strand, within BACOVA_00758at 436.953 kb on - strand, within BACOVA_00758at 436.965 kb on + strand, within BACOVA_00758at 437.065 kb on + strand, within BACOVA_00758at 437.068 kb on - strand, within BACOVA_00758at 437.091 kb on + strand, within BACOVA_00758at 437.123 kb on - strandat 437.129 kb on + strandat 437.129 kb on + strandat 437.212 kb on + strandat 437.255 kb on + strandat 437.275 kb on - strandat 437.359 kb on + strandat 437.360 kb on - strandat 437.366 kb on - strandat 437.401 kb on + strandat 437.426 kb on - strandat 437.426 kb on - strandat 437.476 kb on + strand, within BACOVA_00759at 437.540 kb on + strand, within BACOVA_00759at 437.540 kb on + strand, within BACOVA_00759at 437.541 kb on - strand, within BACOVA_00759at 437.546 kb on + strand, within BACOVA_00759at 437.546 kb on + strand, within BACOVA_00759at 437.609 kb on + strand, within BACOVA_00759at 437.615 kb on + strand, within BACOVA_00759at 437.622 kb on - strand, within BACOVA_00759at 437.628 kb on + strand, within BACOVA_00759at 437.638 kb on - strand, within BACOVA_00759at 437.638 kb on - strand, within BACOVA_00759at 437.741 kb on - strand, within BACOVA_00759at 437.761 kb on - strand, within BACOVA_00759at 437.767 kb on + strand, within BACOVA_00759at 437.770 kb on + strand, within BACOVA_00759at 437.770 kb on + strand, within BACOVA_00759at 437.771 kb on - strand, within BACOVA_00759at 437.782 kb on - strand, within BACOVA_00759at 437.783 kb on + strand, within BACOVA_00759at 437.809 kb on - strand, within BACOVA_00759at 437.815 kb on - strand, within BACOVA_00759at 437.864 kb on - strand, within BACOVA_00759at 437.870 kb on + strand, within BACOVA_00759at 437.935 kb on + strand, within BACOVA_00759at 437.936 kb on - strand, within BACOVA_00759at 437.938 kb on - strand, within BACOVA_00759at 437.970 kb on - strand, within BACOVA_00759at 437.978 kb on - strand, within BACOVA_00759at 437.979 kb on + strand, within BACOVA_00759at 437.980 kb on - strand, within BACOVA_00759at 437.982 kb on - strand, within BACOVA_00759at 437.982 kb on - strand, within BACOVA_00759at 437.982 kb on - strand, within BACOVA_00759at 437.984 kb on - strand, within BACOVA_00759at 437.984 kb on - strand, within BACOVA_00759at 437.984 kb on - strand, within BACOVA_00759at 437.985 kb on + strand, within BACOVA_00759at 437.986 kb on - strand, within BACOVA_00759at 438.009 kb on - strand, within BACOVA_00759at 438.022 kb on + strand, within BACOVA_00759at 438.147 kb on + strand, within BACOVA_00759at 438.148 kb on - strand, within BACOVA_00759at 438.148 kb on - strand, within BACOVA_00759at 438.150 kb on - strand, within BACOVA_00759at 438.181 kb on + strand, within BACOVA_00759at 438.215 kb on - strand, within BACOVA_00759at 438.215 kb on - strand, within BACOVA_00759at 438.219 kb on - strand, within BACOVA_00759at 438.334 kb on - strandat 438.334 kb on - strandat 438.341 kb on - strandat 438.388 kb on + strandat 438.391 kb on - strandat 438.400 kb on + strandat 438.401 kb on - strandat 438.404 kb on + strandat 438.415 kb on + strandat 438.415 kb on + strandat 438.425 kb on - strandat 438.465 kb on - strandat 438.465 kb on - strandat 438.470 kb on + strandat 438.535 kb on - strand, within BACOVA_00760at 438.535 kb on - strand, within BACOVA_00760at 438.536 kb on + strand, within BACOVA_00760at 438.537 kb on - strand, within BACOVA_00760at 438.537 kb on - strand, within BACOVA_00760at 438.540 kb on + strand, within BACOVA_00760at 438.540 kb on + strand, within BACOVA_00760at 438.541 kb on - strand, within BACOVA_00760at 438.566 kb on - strand, within BACOVA_00760at 438.670 kb on - strand, within BACOVA_00760at 438.715 kb on + strand, within BACOVA_00760at 438.715 kb on + strand, within BACOVA_00760at 438.716 kb on - strand, within BACOVA_00760at 438.721 kb on - strand, within BACOVA_00760at 438.781 kb on - strand, within BACOVA_00760at 438.788 kb on + strand, within BACOVA_00760at 438.788 kb on + strand, within BACOVA_00760at 438.789 kb on - strand, within BACOVA_00760at 438.848 kb on + strand, within BACOVA_00760at 438.852 kb on - strand, within BACOVA_00760at 438.852 kb on - strand, within BACOVA_00760at 438.857 kb on + strand, within BACOVA_00760at 438.915 kb on - strand, within BACOVA_00760at 438.951 kb on + strand, within BACOVA_00760at 438.952 kb on - strand, within BACOVA_00760at 438.952 kb on - strand, within BACOVA_00760at 438.957 kb on + strand, within BACOVA_00760at 438.969 kb on + strand, within BACOVA_00760at 438.978 kb on + strand, within BACOVA_00760at 439.032 kb on + strand, within BACOVA_00760at 439.038 kb on - strand, within BACOVA_00760at 439.056 kb on + strand, within BACOVA_00760at 439.057 kb on - strand, within BACOVA_00760at 439.064 kb on + strand, within BACOVA_00760at 439.082 kb on + strand, within BACOVA_00760at 439.121 kb on - strand, within BACOVA_00760at 439.215 kb on - strand, within BACOVA_00760at 439.231 kb on - strand, within BACOVA_00760at 439.237 kb on + strand, within BACOVA_00760at 439.240 kb on + strand, within BACOVA_00760at 439.255 kb on - strand, within BACOVA_00760at 439.297 kb on - strand, within BACOVA_00760at 439.322 kb on - strand, within BACOVA_00760at 439.387 kb on + strand, within BACOVA_00760at 439.398 kb on + strand, within BACOVA_00760at 439.399 kb on - strand, within BACOVA_00760at 439.409 kb on - strand, within BACOVA_00760at 439.416 kb on + strand, within BACOVA_00760

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Pustulan (b-1-6 glucan) 2.5 mg/mL (C)
remove
436,369 - BACOVA_00758 0.14 +0.2
436,440 + BACOVA_00758 0.21 +1.0
436,458 + BACOVA_00758 0.23 +2.6
436,458 + BACOVA_00758 0.23 +0.4
436,459 - BACOVA_00758 0.23 +0.8
436,470 - BACOVA_00758 0.25 +1.9
436,470 - BACOVA_00758 0.25 +0.3
436,532 + BACOVA_00758 0.31 +0.3
436,533 - BACOVA_00758 0.31 -0.5
436,621 + BACOVA_00758 0.40 +0.7
436,621 + BACOVA_00758 0.40 -0.1
436,622 - BACOVA_00758 0.40 +1.1
436,629 + BACOVA_00758 0.41 +0.7
436,636 - BACOVA_00758 0.41 -0.0
436,641 - BACOVA_00758 0.42 +1.1
436,643 - BACOVA_00758 0.42 +1.2
436,645 - BACOVA_00758 0.42 +2.2
436,645 - BACOVA_00758 0.42 -0.8
436,682 + BACOVA_00758 0.46 +0.2
436,690 - BACOVA_00758 0.47 +1.6
436,693 + BACOVA_00758 0.47 +0.3
436,694 - BACOVA_00758 0.47 +0.2
436,694 - BACOVA_00758 0.47 +0.6
436,694 - BACOVA_00758 0.47 -0.3
436,748 + BACOVA_00758 0.53 -1.3
436,749 - BACOVA_00758 0.53 +1.0
436,749 - BACOVA_00758 0.53 -0.5
436,770 + BACOVA_00758 0.55 +1.5
436,950 + BACOVA_00758 0.73 +0.7
436,951 - BACOVA_00758 0.73 -0.8
436,952 + BACOVA_00758 0.73 +1.0
436,953 - BACOVA_00758 0.73 -1.3
436,965 + BACOVA_00758 0.75 -0.7
437,065 + BACOVA_00758 0.85 +1.5
437,068 - BACOVA_00758 0.85 +0.7
437,091 + BACOVA_00758 0.87 -0.2
437,123 - +0.4
437,129 + -0.2
437,129 + -1.5
437,212 + -0.9
437,255 + +0.2
437,275 - +0.6
437,359 + +1.2
437,360 - -1.0
437,366 - -0.5
437,401 + -1.3
437,426 - -0.5
437,426 - -1.8
437,476 + BACOVA_00759 0.11 +0.4
437,540 + BACOVA_00759 0.17 +1.5
437,540 + BACOVA_00759 0.17 +0.4
437,541 - BACOVA_00759 0.17 +0.7
437,546 + BACOVA_00759 0.18 +0.6
437,546 + BACOVA_00759 0.18 -2.3
437,609 + BACOVA_00759 0.23 +0.2
437,615 + BACOVA_00759 0.24 +1.6
437,622 - BACOVA_00759 0.25 +1.3
437,628 + BACOVA_00759 0.25 +0.6
437,638 - BACOVA_00759 0.26 -0.9
437,638 - BACOVA_00759 0.26 +1.1
437,741 - BACOVA_00759 0.36 +1.7
437,761 - BACOVA_00759 0.38 +0.1
437,767 + BACOVA_00759 0.38 -0.5
437,770 + BACOVA_00759 0.39 +1.0
437,770 + BACOVA_00759 0.39 -0.3
437,771 - BACOVA_00759 0.39 +1.1
437,782 - BACOVA_00759 0.40 -0.2
437,783 + BACOVA_00759 0.40 -0.3
437,809 - BACOVA_00759 0.42 -0.1
437,815 - BACOVA_00759 0.43 -0.8
437,864 - BACOVA_00759 0.47 +0.3
437,870 + BACOVA_00759 0.48 -0.4
437,935 + BACOVA_00759 0.54 -0.9
437,936 - BACOVA_00759 0.54 +0.1
437,938 - BACOVA_00759 0.54 -0.6
437,970 - BACOVA_00759 0.57 +1.0
437,978 - BACOVA_00759 0.58 -1.2
437,979 + BACOVA_00759 0.58 -1.3
437,980 - BACOVA_00759 0.58 +1.3
437,982 - BACOVA_00759 0.59 +1.2
437,982 - BACOVA_00759 0.59 -0.0
437,982 - BACOVA_00759 0.59 -0.5
437,984 - BACOVA_00759 0.59 +1.2
437,984 - BACOVA_00759 0.59 -0.7
437,984 - BACOVA_00759 0.59 -1.9
437,985 + BACOVA_00759 0.59 +0.7
437,986 - BACOVA_00759 0.59 -1.8
438,009 - BACOVA_00759 0.61 +0.7
438,022 + BACOVA_00759 0.62 +0.2
438,147 + BACOVA_00759 0.74 +1.2
438,148 - BACOVA_00759 0.74 -0.3
438,148 - BACOVA_00759 0.74 +0.1
438,150 - BACOVA_00759 0.74 +0.2
438,181 + BACOVA_00759 0.77 -0.9
438,215 - BACOVA_00759 0.81 -0.9
438,215 - BACOVA_00759 0.81 -1.2
438,219 - BACOVA_00759 0.81 +1.6
438,334 - +2.3
438,334 - -0.5
438,341 - -0.8
438,388 + -0.9
438,391 - +0.3
438,400 + +0.2
438,401 - +0.1
438,404 + -0.8
438,415 + +1.6
438,415 + +0.8
438,425 - -1.7
438,465 - -1.0
438,465 - -1.4
438,470 + -0.9
438,535 - BACOVA_00760 0.11 -1.4
438,535 - BACOVA_00760 0.11 +2.0
438,536 + BACOVA_00760 0.11 -0.4
438,537 - BACOVA_00760 0.11 +0.6
438,537 - BACOVA_00760 0.11 -0.4
438,540 + BACOVA_00760 0.11 -0.0
438,540 + BACOVA_00760 0.11 +0.3
438,541 - BACOVA_00760 0.11 -2.3
438,566 - BACOVA_00760 0.14 +1.3
438,670 - BACOVA_00760 0.22 +1.6
438,715 + BACOVA_00760 0.26 -0.8
438,715 + BACOVA_00760 0.26 +1.5
438,716 - BACOVA_00760 0.26 -0.8
438,721 - BACOVA_00760 0.27 +1.0
438,781 - BACOVA_00760 0.32 -0.9
438,788 + BACOVA_00760 0.32 +0.8
438,788 + BACOVA_00760 0.32 -1.3
438,789 - BACOVA_00760 0.32 +0.6
438,848 + BACOVA_00760 0.37 +0.2
438,852 - BACOVA_00760 0.38 -1.7
438,852 - BACOVA_00760 0.38 +0.9
438,857 + BACOVA_00760 0.38 +0.8
438,915 - BACOVA_00760 0.43 +0.5
438,951 + BACOVA_00760 0.46 +3.3
438,952 - BACOVA_00760 0.46 +0.2
438,952 - BACOVA_00760 0.46 -1.5
438,957 + BACOVA_00760 0.47 +1.6
438,969 + BACOVA_00760 0.48 +0.3
438,978 + BACOVA_00760 0.48 -0.1
439,032 + BACOVA_00760 0.53 -0.9
439,038 - BACOVA_00760 0.53 +0.2
439,056 + BACOVA_00760 0.55 -0.7
439,057 - BACOVA_00760 0.55 -0.3
439,064 + BACOVA_00760 0.56 +0.7
439,082 + BACOVA_00760 0.57 +0.8
439,121 - BACOVA_00760 0.60 -0.4
439,215 - BACOVA_00760 0.68 +0.4
439,231 - BACOVA_00760 0.70 +1.9
439,237 + BACOVA_00760 0.70 +0.7
439,240 + BACOVA_00760 0.70 +0.1
439,255 - BACOVA_00760 0.72 +0.6
439,297 - BACOVA_00760 0.75 -0.8
439,322 - BACOVA_00760 0.77 -2.1
439,387 + BACOVA_00760 0.83 -0.7
439,398 + BACOVA_00760 0.84 +1.2
439,399 - BACOVA_00760 0.84 -1.5
439,409 - BACOVA_00760 0.85 +0.3
439,416 + BACOVA_00760 0.85 +0.6

Or see this region's nucleotide sequence