Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16770

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
3,676,035	+		OKGIIK_16765	0.15	-1.4
3,676,035	+		OKGIIK_16765	0.15	+1.7
3,676,035	+		OKGIIK_16765	0.15	-1.1
3,676,036	-		OKGIIK_16765	0.15	+0.3
3,676,036	-		OKGIIK_16765	0.15	+0.3
3,676,036	-		OKGIIK_16765	0.15	-0.7
3,676,036	-		OKGIIK_16765	0.15	+0.9
3,676,350	+		OKGIIK_16765	0.43	+0.3
3,676,350	+		OKGIIK_16765	0.43	+0.1
3,676,350	+		OKGIIK_16765	0.43	-0.4
3,676,350	+		OKGIIK_16765	0.43	-0.5
3,676,350	+		OKGIIK_16765	0.43	-0.1
3,676,350	+		OKGIIK_16765	0.43	+0.9
3,676,350	+		OKGIIK_16765	0.43	+1.5
3,676,351	-		OKGIIK_16765	0.43	+0.7
3,676,351	-		OKGIIK_16765	0.43	-0.6
3,676,351	-		OKGIIK_16765	0.43	+0.3
3,676,351	-		OKGIIK_16765	0.43	-0.4
3,676,351	-		OKGIIK_16765	0.43	+0.4
3,676,351	-		OKGIIK_16765	0.43	+0.9
3,676,351	-		OKGIIK_16765	0.43	+0.2
3,676,351	-		OKGIIK_16765	0.43	-1.9
3,676,389	+		OKGIIK_16765	0.47	-0.4
3,676,390	-		OKGIIK_16765	0.47	+1.1
3,676,390	-		OKGIIK_16765	0.47	+0.3
3,676,740	+		OKGIIK_16765	0.78	-1.1
3,676,740	+		OKGIIK_16765	0.78	+0.3
3,676,740	+		OKGIIK_16765	0.78	+0.7
3,676,740	+		OKGIIK_16765	0.78	-1.8
3,676,740	+		OKGIIK_16765	0.78	-0.5
3,676,740	+		OKGIIK_16765	0.78	-0.0
3,676,740	+		OKGIIK_16765	0.78	+0.1
3,676,740	+		OKGIIK_16765	0.78	-0.8
3,676,755	+		OKGIIK_16765	0.79	+0.7
3,676,755	+		OKGIIK_16765	0.79	-0.9
3,676,755	+		OKGIIK_16765	0.79	-0.7
3,676,755	+		OKGIIK_16765	0.79	-0.7
3,676,755	+		OKGIIK_16765	0.79	-1.4
3,676,756	-		OKGIIK_16765	0.79	+3.2
3,676,822	+		OKGIIK_16765	0.85	-1.9
3,676,822	+		OKGIIK_16765	0.85	+1.0
3,676,822	+		OKGIIK_16765	0.85	+1.9
3,676,822	+		OKGIIK_16765	0.85	-1.9
3,676,823	-		OKGIIK_16765	0.85	-0.7
3,676,823	-		OKGIIK_16765	0.85	-0.9
3,676,823	-		OKGIIK_16765	0.85	+0.1
3,676,823	-		OKGIIK_16765	0.85	-0.9
3,676,823	-		OKGIIK_16765	0.85	-0.7
3,677,000	+				-1.3
3,677,000	+				+0.9
3,677,001	-				-0.1
3,677,001	-				+1.5
3,677,075	+				+0.2
3,677,076	-				-1.3
3,677,076	-				+0.2
3,677,076	-				+0.5
3,677,636	+		OKGIIK_16770	0.52	-1.3
3,677,636	+		OKGIIK_16770	0.52	-0.7
3,677,636	+		OKGIIK_16770	0.52	-0.5
3,677,636	+		OKGIIK_16770	0.52	+0.3
3,677,636	+		OKGIIK_16770	0.52	+1.1
3,677,636	+		OKGIIK_16770	0.52	+0.5
3,677,636	+		OKGIIK_16770	0.52	+0.9
3,677,636	+		OKGIIK_16770	0.52	+3.2
3,677,636	+		OKGIIK_16770	0.52	-0.7
3,677,636	+		OKGIIK_16770	0.52	+0.1
3,677,637	-		OKGIIK_16770	0.52	+0.1
3,677,637	-		OKGIIK_16770	0.52	+1.2
3,677,637	-		OKGIIK_16770	0.52	+0.9
3,677,637	-		OKGIIK_16770	0.52	+0.0
3,677,637	-		OKGIIK_16770	0.52	-0.1
3,677,637	-		OKGIIK_16770	0.52	+1.7
3,677,762	+		OKGIIK_16770	0.62	+2.9
3,677,762	+		OKGIIK_16770	0.62	+0.7
3,677,762	+		OKGIIK_16770	0.62	-1.4
3,677,762	+		OKGIIK_16770	0.62	+0.9
3,677,762	+		OKGIIK_16770	0.62	+0.3
3,677,762	+		OKGIIK_16770	0.62	-0.1
3,677,762	+		OKGIIK_16770	0.62	+2.1
3,677,762	+		OKGIIK_16770	0.62	+1.9
3,677,763	-		OKGIIK_16770	0.62	+1.7
3,677,763	-		OKGIIK_16770	0.62	+0.3
3,677,763	-		OKGIIK_16770	0.62	-0.1
3,677,763	-		OKGIIK_16770	0.62	+0.3
3,677,763	-		OKGIIK_16770	0.62	+1.1
3,677,763	-		OKGIIK_16770	0.62	-0.1
3,677,763	-		OKGIIK_16770	0.62	-1.0
3,677,763	-		OKGIIK_16770	0.62	-0.7
3,677,763	-		OKGIIK_16770	0.62	+0.5
3,677,763	-		OKGIIK_16770	0.62	-0.4
3,677,763	-		OKGIIK_16770	0.62	+0.6
3,677,763	-		OKGIIK_16770	0.62	+0.5
3,677,763	-		OKGIIK_16770	0.62	-0.9
3,677,763	-		OKGIIK_16770	0.62	+0.6
3,677,790	+		OKGIIK_16770	0.64	+0.3
3,677,791	-		OKGIIK_16770	0.64	-1.4
3,677,791	-		OKGIIK_16770	0.64	-0.1
3,677,861	+		OKGIIK_16770	0.69	-1.1
3,677,861	+		OKGIIK_16770	0.69	-0.1
3,677,862	-		OKGIIK_16770	0.70	+1.2
3,678,005	+		OKGIIK_16770	0.81	-0.9
3,678,005	+		OKGIIK_16770	0.81	+0.7
3,678,005	+		OKGIIK_16770	0.81	-0.0
3,678,005	+		OKGIIK_16770	0.81	+0.6
3,678,005	+		OKGIIK_16770	0.81	+0.1
3,678,005	+		OKGIIK_16770	0.81	+1.4
3,678,005	+		OKGIIK_16770	0.81	-0.6
3,678,005	+		OKGIIK_16770	0.81	+0.6
3,678,006	-		OKGIIK_16770	0.81	-0.0
3,678,006	-		OKGIIK_16770	0.81	-0.0
3,678,006	-		OKGIIK_16770	0.81	-1.4
3,678,006	-		OKGIIK_16770	0.81	-1.1
3,678,006	-		OKGIIK_16770	0.81	+0.5
3,678,006	-		OKGIIK_16770	0.81	+0.0
3,678,006	-		OKGIIK_16770	0.81	-1.4
3,678,006	-		OKGIIK_16770	0.81	+0.3
3,678,107	+		OKGIIK_16770	0.89	+0.5
3,678,107	+		OKGIIK_16770	0.89	+0.8
3,678,108	-		OKGIIK_16770	0.89	+0.3
3,678,108	-		OKGIIK_16770	0.89	+0.3
3,678,225	+				+0.9
3,678,242	+				-1.1
3,678,242	+				-0.4
3,678,242	+				-1.0
3,678,242	+				-1.3
3,678,242	+				-0.1
3,678,242	+				-0.1
3,678,242	+				+0.3
3,678,242	+				-0.3
3,678,242	+				-1.4
3,678,242	+				-2.4
3,678,242	+				+0.9
3,678,242	+				-0.1
3,678,242	+				+1.1
3,678,243	-				-1.7
3,678,243	-				+0.1
3,678,243	-				-1.6
3,678,243	-				-1.1
3,678,243	-				+0.3
3,678,243	-				+0.3
3,678,243	-				+0.9
3,678,243	-				-0.8
3,678,243	-				+0.1
3,678,243	-				-0.7
3,678,251	+				+0.3
3,678,251	+				+1.3
3,678,251	+				+0.2
3,678,251	+				+0.9
3,678,251	+				+1.2
3,678,251	+				+0.1
3,678,251	+				+0.9
3,678,251	+				-1.6
3,678,251	+				-1.1
3,678,251	+				+0.5
3,678,251	+				+0.1
3,678,252	-				+0.5
3,678,252	-				-1.4
3,678,252	-				+0.3
3,678,252	-				+1.0
3,678,252	-				-1.2
3,678,252	-				-1.1
3,678,252	-				+1.5
3,678,252	-				+1.9
3,678,272	+				+0.8
3,678,273	-				-1.1
3,678,273	-				-0.1
3,678,281	-				-0.7
3,678,455	+				-0.1
3,678,455	+				-1.1
3,678,455	+				+1.1
3,678,455	+				-0.1
3,678,455	+				-1.9
3,678,455	+				-0.6
3,678,456	-				-1.5
3,678,456	-				+0.4
3,678,456	-				+0.1
3,678,456	-				-0.1
3,678,456	-				-0.1
3,678,578	+		OKGIIK_16775	0.15	+2.4
3,678,578	+		OKGIIK_16775	0.15	-0.4
3,678,578	+		OKGIIK_16775	0.15	+3.2
3,678,579	-		OKGIIK_16775	0.15	-0.9
3,678,579	-		OKGIIK_16775	0.15	-2.9
3,678,579	-		OKGIIK_16775	0.15	-0.1
3,678,579	-		OKGIIK_16775	0.15	-0.3
3,678,579	-		OKGIIK_16775	0.15	-1.4
3,678,620	+		OKGIIK_16775	0.17	-0.1
3,678,620	+		OKGIIK_16775	0.17	+0.2
3,678,620	+		OKGIIK_16775	0.17	-1.3
3,678,620	+		OKGIIK_16775	0.17	-0.6
3,678,620	+		OKGIIK_16775	0.17	+1.3
3,678,621	-		OKGIIK_16775	0.17	+0.6
3,678,621	-		OKGIIK_16775	0.17	+0.9
3,678,621	-		OKGIIK_16775	0.17	-0.1
3,678,945	-		OKGIIK_16775	0.31	+1.7
3,678,945	-		OKGIIK_16775	0.31	-2.1
3,679,191	+		OKGIIK_16775	0.43	-1.9
3,679,192	-		OKGIIK_16775	0.43	-0.7
3,679,192	-		OKGIIK_16775	0.43	+0.7
3,679,192	-		OKGIIK_16775	0.43	-1.1
3,679,192	-		OKGIIK_16775	0.43	+0.9
3,679,192	-		OKGIIK_16775	0.43	+1.3