Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16500

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
3,624,883	-		OKGIIK_16495	0.37	-0.4
3,624,910	-		OKGIIK_16495	0.39	-1.5
3,624,910	-		OKGIIK_16495	0.39	-1.8
3,624,936	+		OKGIIK_16495	0.41	+0.5
3,624,936	+		OKGIIK_16495	0.41	+0.2
3,624,936	+		OKGIIK_16495	0.41	+1.2
3,624,936	+		OKGIIK_16495	0.41	-0.7
3,624,936	+		OKGIIK_16495	0.41	+0.9
3,624,936	+		OKGIIK_16495	0.41	-0.3
3,624,936	+		OKGIIK_16495	0.41	+0.9
3,624,936	+		OKGIIK_16495	0.41	+1.2
3,624,936	+		OKGIIK_16495	0.41	+0.9
3,624,937	-		OKGIIK_16495	0.41	+0.1
3,624,937	-		OKGIIK_16495	0.41	-1.8
3,624,937	-		OKGIIK_16495	0.41	-1.1
3,624,937	-		OKGIIK_16495	0.41	-0.1
3,624,937	-		OKGIIK_16495	0.41	+0.9
3,624,937	-		OKGIIK_16495	0.41	-0.7
3,624,937	-		OKGIIK_16495	0.41	-0.9
3,624,937	-		OKGIIK_16495	0.41	-0.1
3,624,937	-		OKGIIK_16495	0.41	-1.2
3,624,937	-		OKGIIK_16495	0.41	+0.7
3,624,937	-		OKGIIK_16495	0.41	-1.4
3,625,005	+		OKGIIK_16495	0.46	-1.3
3,625,005	+		OKGIIK_16495	0.46	+0.3
3,625,005	+		OKGIIK_16495	0.46	-2.3
3,625,005	+		OKGIIK_16495	0.46	+0.3
3,625,005	+		OKGIIK_16495	0.46	+1.2
3,625,005	+		OKGIIK_16495	0.46	-0.1
3,625,005	+		OKGIIK_16495	0.46	-1.4
3,625,005	+		OKGIIK_16495	0.46	-1.1
3,625,005	+		OKGIIK_16495	0.46	-1.1
3,625,005	+		OKGIIK_16495	0.46	+0.5
3,625,005	+		OKGIIK_16495	0.46	-1.2
3,625,005	+		OKGIIK_16495	0.46	+0.3
3,625,005	+		OKGIIK_16495	0.46	+1.5
3,625,006	-		OKGIIK_16495	0.46	-0.7
3,625,006	-		OKGIIK_16495	0.46	+1.4
3,625,006	-		OKGIIK_16495	0.46	+2.5
3,625,006	-		OKGIIK_16495	0.46	-0.7
3,625,006	-		OKGIIK_16495	0.46	+0.6
3,625,006	-		OKGIIK_16495	0.46	-0.3
3,625,006	-		OKGIIK_16495	0.46	+1.2
3,625,006	-		OKGIIK_16495	0.46	-0.7
3,625,006	-		OKGIIK_16495	0.46	+0.3
3,625,006	-		OKGIIK_16495	0.46	+0.3
3,625,006	-		OKGIIK_16495	0.46	-0.1
3,625,006	-		OKGIIK_16495	0.46	+1.2
3,625,006	-		OKGIIK_16495	0.46	+1.4
3,625,006	-		OKGIIK_16495	0.46	-1.9
3,625,006	-		OKGIIK_16495	0.46	-0.0
3,625,006	-		OKGIIK_16495	0.46	-0.9
3,625,006	-		OKGIIK_16495	0.46	-1.8
3,625,006	-		OKGIIK_16495	0.46	+0.2
3,625,006	-		OKGIIK_16495	0.46	+1.5
3,625,006	-		OKGIIK_16495	0.46	-0.3
3,625,262	+		OKGIIK_16495	0.64	-2.2
3,625,262	+		OKGIIK_16495	0.64	+0.7
3,625,262	+		OKGIIK_16495	0.64	+1.3
3,625,262	+		OKGIIK_16495	0.64	-0.3
3,625,262	+		OKGIIK_16495	0.64	+0.4
3,625,262	+		OKGIIK_16495	0.64	+0.3
3,625,262	+		OKGIIK_16495	0.64	+0.3
3,625,262	+		OKGIIK_16495	0.64	-0.1
3,625,262	+		OKGIIK_16495	0.64	-0.1
3,625,262	+		OKGIIK_16495	0.64	+0.3
3,625,262	+		OKGIIK_16495	0.64	-0.1
3,625,263	-		OKGIIK_16495	0.64	+0.0
3,625,263	-		OKGIIK_16495	0.64	-1.9
3,625,263	-		OKGIIK_16495	0.64	+0.9
3,625,263	-		OKGIIK_16495	0.64	-0.1
3,625,263	-		OKGIIK_16495	0.64	-0.1
3,625,263	-		OKGIIK_16495	0.64	-0.6
3,625,263	-		OKGIIK_16495	0.64	+0.3
3,625,263	-		OKGIIK_16495	0.64	+0.9
3,625,263	-		OKGIIK_16495	0.64	+0.1
3,625,263	-		OKGIIK_16495	0.64	-0.2
3,625,263	-		OKGIIK_16495	0.64	+0.6
3,625,263	-		OKGIIK_16495	0.64	-1.7
3,625,263	-		OKGIIK_16495	0.64	+0.6
3,625,263	-		OKGIIK_16495	0.64	+0.9
3,625,326	+		OKGIIK_16495	0.69	+1.6
3,625,326	+		OKGIIK_16495	0.69	+1.9
3,625,326	+		OKGIIK_16495	0.69	-0.7
3,625,327	-		OKGIIK_16495	0.69	-0.1
3,625,327	-		OKGIIK_16495	0.69	+0.5
3,625,404	+		OKGIIK_16495	0.74	+0.1
3,625,404	+		OKGIIK_16495	0.74	-0.0
3,625,404	+		OKGIIK_16495	0.74	+1.7
3,625,404	+		OKGIIK_16495	0.74	+0.4
3,625,404	+		OKGIIK_16495	0.74	+0.9
3,625,404	+		OKGIIK_16495	0.74	+0.9
3,625,404	+		OKGIIK_16495	0.74	-0.1
3,625,404	+		OKGIIK_16495	0.74	-1.9
3,625,404	+		OKGIIK_16495	0.74	-1.4
3,625,404	+		OKGIIK_16495	0.74	-0.1
3,625,405	-		OKGIIK_16495	0.74	-0.8
3,625,405	-		OKGIIK_16495	0.74	+0.4
3,625,405	-		OKGIIK_16495	0.74	-0.5
3,625,405	-		OKGIIK_16495	0.74	+0.4
3,625,405	-		OKGIIK_16495	0.74	+1.1
3,625,405	-		OKGIIK_16495	0.74	+2.5
3,625,825	+				-2.3
3,625,825	+				+0.6
3,625,826	-				+1.9
3,626,041	+		OKGIIK_16500	0.30	+0.8
3,626,041	+		OKGIIK_16500	0.30	+0.5
3,626,041	+		OKGIIK_16500	0.30	+0.8
3,626,042	-		OKGIIK_16500	0.30	-0.4
3,626,102	-		OKGIIK_16500	0.37	-1.7
3,626,102	-		OKGIIK_16500	0.37	-0.7
3,626,197	+		OKGIIK_16500	0.48	-1.4
3,626,197	+		OKGIIK_16500	0.48	-0.7
3,626,198	-		OKGIIK_16500	0.48	+0.3
3,626,320	+		OKGIIK_16500	0.62	+0.3
3,626,320	+		OKGIIK_16500	0.62	+0.5
3,626,320	+		OKGIIK_16500	0.62	-1.3
3,626,320	+		OKGIIK_16500	0.62	+0.3
3,626,320	+		OKGIIK_16500	0.62	-2.6
3,626,320	+		OKGIIK_16500	0.62	+1.7
3,626,320	+		OKGIIK_16500	0.62	-0.2
3,626,320	+		OKGIIK_16500	0.62	-0.7
3,626,320	+		OKGIIK_16500	0.62	-1.3
3,626,321	-		OKGIIK_16500	0.62	-1.1
3,626,321	-		OKGIIK_16500	0.62	-0.9
3,626,321	-		OKGIIK_16500	0.62	+2.1
3,626,321	-		OKGIIK_16500	0.62	-0.2
3,626,321	-		OKGIIK_16500	0.62	-0.1
3,626,321	-		OKGIIK_16500	0.62	+0.7
3,626,321	-		OKGIIK_16500	0.62	+1.1
3,626,321	-		OKGIIK_16500	0.62	+0.1
3,626,414	+		OKGIIK_16500	0.72	-0.5
3,626,414	+		OKGIIK_16500	0.72	+0.3
3,626,414	+		OKGIIK_16500	0.72	+1.1
3,626,414	+		OKGIIK_16500	0.72	+0.0
3,626,414	+		OKGIIK_16500	0.72	-1.1
3,626,415	-		OKGIIK_16500	0.73	-1.7
3,626,415	-		OKGIIK_16500	0.73	-0.1
3,626,415	-		OKGIIK_16500	0.73	-0.1
3,626,415	-		OKGIIK_16500	0.73	+1.5
3,626,446	+		OKGIIK_16500	0.76	+0.1
3,626,446	+		OKGIIK_16500	0.76	+0.9
3,626,446	+		OKGIIK_16500	0.76	-0.6
3,626,446	+		OKGIIK_16500	0.76	+0.9
3,626,446	+		OKGIIK_16500	0.76	+2.3
3,626,446	+		OKGIIK_16500	0.76	+0.3
3,626,446	+		OKGIIK_16500	0.76	+0.9
3,626,446	+		OKGIIK_16500	0.76	-1.9
3,626,446	+		OKGIIK_16500	0.76	+0.0
3,626,446	+		OKGIIK_16500	0.76	-1.0
3,626,446	+		OKGIIK_16500	0.76	+0.2
3,626,446	+		OKGIIK_16500	0.76	+0.9
3,626,446	+		OKGIIK_16500	0.76	-0.2
3,626,446	+		OKGIIK_16500	0.76	+1.9
3,626,446	+		OKGIIK_16500	0.76	+1.6
3,626,446	+		OKGIIK_16500	0.76	+2.0
3,626,447	-		OKGIIK_16500	0.76	-0.2
3,626,447	-		OKGIIK_16500	0.76	+2.5
3,626,447	-		OKGIIK_16500	0.76	-0.4
3,626,447	-		OKGIIK_16500	0.76	+0.6
3,626,447	-		OKGIIK_16500	0.76	+1.2
3,626,447	-		OKGIIK_16500	0.76	-0.7
3,626,447	-		OKGIIK_16500	0.76	+1.6
3,626,447	-		OKGIIK_16500	0.76	-0.4
3,626,447	-		OKGIIK_16500	0.76	+0.9
3,626,447	-		OKGIIK_16500	0.76	-0.1
3,626,447	-		OKGIIK_16500	0.76	+1.9
3,626,447	-		OKGIIK_16500	0.76	+0.5
3,626,684	+				-1.1
3,626,684	+				+0.4
3,626,684	+				+0.5
3,626,684	+				-0.6
3,626,684	+				+1.3
3,626,685	-				-1.6
3,626,685	-				-1.7
3,626,685	-				+1.9
3,626,685	-				-2.0
3,626,685	-				+0.5
3,626,792	+				+1.1
3,626,792	+				+0.1
3,626,792	+				-1.3
3,626,792	+				-0.9
3,626,793	-				-0.0
3,626,793	-				-0.1
3,626,793	-				+0.4
3,626,793	-				+0.5
3,626,879	+				-0.9
3,626,879	+				-0.3
3,626,879	+				+0.5
3,626,879	+				-0.1
3,626,879	+				-1.5
3,626,880	-				-1.6
3,626,880	-				+0.6
3,626,880	-				+0.7
3,626,880	-				-0.1
3,626,880	-				+1.1
3,626,880	-				-1.1
3,626,975	+				+0.3
3,626,975	+				+0.9
3,626,975	+				+0.9
3,626,975	+				+0.1
3,626,975	+				+0.2
3,626,975	+				+0.1
3,626,975	+				+0.4
3,626,975	+				-0.5
3,626,975	+				-0.1
3,626,975	+				+0.9
3,626,975	+				-2.8
3,626,975	+				+0.5
3,626,975	+				-0.3
3,626,975	+				+0.1
3,626,976	-				+0.9
3,626,976	-				-0.1
3,626,976	-				-0.1
3,626,976	-				-0.1
3,626,976	-				-0.4
3,626,976	-				-1.9
3,626,976	-				+0.9
3,626,976	-				-2.3
3,627,008	+				-0.6
3,627,008	+				-0.1
3,627,008	+				-0.1
3,627,008	+				-1.4
3,627,008	+				-0.9
3,627,008	+				-1.7
3,627,008	+				-0.4
3,627,008	+				-0.4
3,627,009	-				-0.5
3,627,009	-				-1.4
3,627,009	-				+0.4
3,627,009	-				+0.3
3,627,009	-				-1.7
3,627,009	-				+0.5
3,627,173	+	putA	OKGIIK_16505	0.11	-0.1
3,627,173	+	putA	OKGIIK_16505	0.11	-2.6
3,627,174	-	putA	OKGIIK_16505	0.11	-0.7
3,627,174	-	putA	OKGIIK_16505	0.11	+0.9
3,627,174	-	putA	OKGIIK_16505	0.11	-1.2
3,627,174	-	putA	OKGIIK_16505	0.11	-0.7
3,627,174	-	putA	OKGIIK_16505	0.11	+0.9
3,627,174	-	putA	OKGIIK_16505	0.11	-0.9
3,627,174	-	putA	OKGIIK_16505	0.11	+0.8