Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16390

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
3,599,472	+		OKGIIK_16385	0.70	-0.3
3,599,472	+		OKGIIK_16385	0.70	+1.2
3,599,472	+		OKGIIK_16385	0.70	-0.0
3,599,472	+		OKGIIK_16385	0.70	+0.9
3,599,473	-		OKGIIK_16385	0.70	-0.5
3,599,473	-		OKGIIK_16385	0.70	-0.3
3,599,473	-		OKGIIK_16385	0.70	-1.7
3,599,473	-		OKGIIK_16385	0.70	-0.1
3,599,473	-		OKGIIK_16385	0.70	-0.5
3,599,628	+		OKGIIK_16385	0.80	+0.8
3,599,628	+		OKGIIK_16385	0.80	-0.9
3,599,628	+		OKGIIK_16385	0.80	-0.1
3,599,628	+		OKGIIK_16385	0.80	+0.1
3,599,628	+		OKGIIK_16385	0.80	+0.9
3,599,628	+		OKGIIK_16385	0.80	-1.1
3,599,628	+		OKGIIK_16385	0.80	-1.3
3,599,628	+		OKGIIK_16385	0.80	-0.4
3,599,628	+		OKGIIK_16385	0.80	+0.9
3,599,629	-		OKGIIK_16385	0.80	-1.4
3,599,629	-		OKGIIK_16385	0.80	+0.9
3,599,629	-		OKGIIK_16385	0.80	+0.3
3,599,629	-		OKGIIK_16385	0.80	-1.4
3,599,629	-		OKGIIK_16385	0.80	-0.6
3,599,629	-		OKGIIK_16385	0.80	-1.7
3,599,629	-		OKGIIK_16385	0.80	-0.4
3,599,629	-		OKGIIK_16385	0.80	+1.4
3,599,629	-		OKGIIK_16385	0.80	+0.6
3,599,629	-		OKGIIK_16385	0.80	-1.0
3,599,629	-		OKGIIK_16385	0.80	-1.1
3,599,629	-		OKGIIK_16385	0.80	+0.4
3,599,629	-		OKGIIK_16385	0.80	+0.9
3,599,629	-		OKGIIK_16385	0.80	-1.1
3,599,629	-		OKGIIK_16385	0.80	-0.7
3,599,664	+		OKGIIK_16385	0.82	-0.4
3,599,664	+		OKGIIK_16385	0.82	-0.4
3,599,664	+		OKGIIK_16385	0.82	-0.1
3,599,664	+		OKGIIK_16385	0.82	+1.6
3,599,664	+		OKGIIK_16385	0.82	-0.8
3,599,664	+		OKGIIK_16385	0.82	-0.4
3,599,664	+		OKGIIK_16385	0.82	+0.3
3,599,664	+		OKGIIK_16385	0.82	-0.4
3,599,664	+		OKGIIK_16385	0.82	-0.7
3,599,664	+		OKGIIK_16385	0.82	+0.9
3,599,664	+		OKGIIK_16385	0.82	-0.6
3,599,664	+		OKGIIK_16385	0.82	+0.6
3,599,665	-		OKGIIK_16385	0.82	-1.9
3,599,665	-		OKGIIK_16385	0.82	+0.9
3,599,665	-		OKGIIK_16385	0.82	-1.3
3,599,665	-		OKGIIK_16385	0.82	+1.9
3,599,665	-		OKGIIK_16385	0.82	+0.9
3,599,665	-		OKGIIK_16385	0.82	+1.4
3,599,665	-		OKGIIK_16385	0.82	+0.2
3,599,665	-		OKGIIK_16385	0.82	+0.1
3,599,689	-		OKGIIK_16385	0.83	-1.1
3,599,700	+		OKGIIK_16385	0.84	+0.3
3,599,700	+		OKGIIK_16385	0.84	+1.9
3,599,700	+		OKGIIK_16385	0.84	+0.5
3,599,701	-		OKGIIK_16385	0.84	-0.7
3,599,701	-		OKGIIK_16385	0.84	+1.3
3,599,701	-		OKGIIK_16385	0.84	-0.3
3,599,701	-		OKGIIK_16385	0.84	+1.1
3,599,701	-		OKGIIK_16385	0.84	-1.7
3,599,733	+		OKGIIK_16385	0.86	-0.1
3,599,733	+		OKGIIK_16385	0.86	-1.3
3,599,733	+		OKGIIK_16385	0.86	-0.7
3,599,733	+		OKGIIK_16385	0.86	+1.5
3,599,733	+		OKGIIK_16385	0.86	-0.9
3,599,734	-		OKGIIK_16385	0.86	-1.1
3,599,734	-		OKGIIK_16385	0.86	+0.4
3,599,734	-		OKGIIK_16385	0.86	-0.3
3,599,898	+				-0.7
3,599,898	+				-0.1
3,599,899	-				-0.9
3,599,899	-				-0.7
3,599,899	-				-1.9
3,599,899	-				+0.9
3,599,899	-				+0.1
3,600,058	+		OKGIIK_16390	0.12	-0.9
3,600,058	+		OKGIIK_16390	0.12	-2.1
3,600,059	-		OKGIIK_16390	0.12	+0.7
3,600,256	+		OKGIIK_16390	0.33	-0.6
3,600,257	-		OKGIIK_16390	0.33	-1.3
3,600,257	-		OKGIIK_16390	0.33	+0.7
3,600,257	-		OKGIIK_16390	0.33	-0.1
3,600,451	+		OKGIIK_16390	0.53	+1.5
3,600,451	+		OKGIIK_16390	0.53	+0.1
3,600,451	+		OKGIIK_16390	0.53	+0.9
3,600,451	+		OKGIIK_16390	0.53	+2.7
3,600,451	+		OKGIIK_16390	0.53	+0.9
3,600,451	+		OKGIIK_16390	0.53	+2.1
3,600,451	+		OKGIIK_16390	0.53	+0.6
3,600,451	+		OKGIIK_16390	0.53	-1.4
3,600,451	+		OKGIIK_16390	0.53	-0.4
3,600,451	+		OKGIIK_16390	0.53	+1.3
3,600,451	+		OKGIIK_16390	0.53	+0.3
3,600,451	+		OKGIIK_16390	0.53	-0.9
3,600,451	+		OKGIIK_16390	0.53	-1.7
3,600,451	+		OKGIIK_16390	0.53	+2.7
3,600,452	-		OKGIIK_16390	0.54	-0.1
3,600,452	-		OKGIIK_16390	0.54	-0.1
3,600,452	-		OKGIIK_16390	0.54	-0.1
3,600,452	-		OKGIIK_16390	0.54	+0.2
3,600,452	-		OKGIIK_16390	0.54	-1.4
3,600,452	-		OKGIIK_16390	0.54	+0.3
3,600,452	-		OKGIIK_16390	0.54	-2.4
3,600,452	-		OKGIIK_16390	0.54	+1.2
3,600,514	+		OKGIIK_16390	0.60	-0.9
3,600,514	+		OKGIIK_16390	0.60	-0.1
3,600,514	+		OKGIIK_16390	0.60	-1.1
3,600,514	+		OKGIIK_16390	0.60	+0.5
3,600,514	+		OKGIIK_16390	0.60	-1.4
3,600,515	-		OKGIIK_16390	0.60	+1.3
3,600,515	-		OKGIIK_16390	0.60	-0.1
3,600,515	-		OKGIIK_16390	0.60	+0.9
3,600,515	-		OKGIIK_16390	0.60	+0.5
3,600,718	+		OKGIIK_16390	0.82	+0.9
3,600,718	+		OKGIIK_16390	0.82	-0.7
3,600,718	+		OKGIIK_16390	0.82	-0.8
3,600,719	-		OKGIIK_16390	0.82	+1.7
3,600,719	-		OKGIIK_16390	0.82	+0.2
3,600,719	-		OKGIIK_16390	0.82	-0.7
3,600,719	-		OKGIIK_16390	0.82	+0.6
3,600,719	-		OKGIIK_16390	0.82	-0.5
3,601,003	+				+0.9
3,601,003	+				+0.9
3,601,004	-				+0.5
3,601,004	-				+0.6
3,601,004	-				+0.7
3,601,041	+				-0.1
3,601,041	+				+0.9
3,601,072	+				-0.7
3,601,072	+				+0.6
3,601,072	+				+0.1
3,601,072	+				-0.7
3,601,072	+				-0.1
3,601,072	+				+1.2
3,601,072	+				-1.4
3,601,072	+				+1.5
3,601,072	+				+1.7
3,601,072	+				-0.4
3,601,072	+				+0.9
3,601,072	+				-0.6
3,601,072	+				-0.7
3,601,072	+				+0.9
3,601,072	+				-0.1
3,601,072	+				+0.3
3,601,073	-				-0.1
3,601,073	-				+1.5
3,601,073	-				+0.5
3,601,073	-				-0.3
3,601,073	-				-0.4
3,601,073	-				+0.3
3,601,073	-				+0.5
3,601,073	-				+0.9
3,601,073	-				-1.1
3,601,073	-				+0.9
3,601,073	-				+1.4
3,601,073	-				+0.3
3,601,073	-				+0.2
3,601,073	-				+0.4
3,601,073	-				+1.2
3,601,105	+				+0.1
3,601,105	+				-2.1
3,601,105	+				-0.7
3,601,105	+				-0.6
3,601,105	+				-1.7
3,601,105	+				+0.8
3,601,105	+				-1.1
3,601,105	+				-0.2
3,601,105	+				-0.7
3,601,105	+				-1.0
3,601,106	-				-1.1
3,601,106	-				+1.1
3,601,106	-				-1.5
3,601,106	-				+1.0
3,601,106	-				+0.9
3,601,106	-				+0.5
3,601,106	-				+0.2
3,601,106	-				-0.8
3,601,106	-				-0.4
3,601,106	-				-1.2
3,601,106	-				-0.1
3,601,106	-				+0.0
3,601,106	-				-1.4
3,601,106	-				-1.5
3,601,106	-				-0.1
3,601,106	-				-0.7
3,601,106	-				-0.1
3,601,106	-				+0.9
3,601,106	-				+0.2
3,601,133	+		OKGIIK_16395	0.11	+0.5
3,601,133	+		OKGIIK_16395	0.11	-0.1
3,601,134	-		OKGIIK_16395	0.11	+0.1
3,601,207	+		OKGIIK_16395	0.15	+1.2
3,601,207	+		OKGIIK_16395	0.15	-0.8
3,601,207	+		OKGIIK_16395	0.15	+0.1
3,601,207	+		OKGIIK_16395	0.15	-0.2
3,601,207	+		OKGIIK_16395	0.15	-1.1
3,601,207	+		OKGIIK_16395	0.15	-0.9
3,601,208	-		OKGIIK_16395	0.15	-1.1
3,601,208	-		OKGIIK_16395	0.15	+0.1
3,601,208	-		OKGIIK_16395	0.15	-1.4
3,601,208	-		OKGIIK_16395	0.15	-0.4
3,601,208	-		OKGIIK_16395	0.15	-0.6
3,601,264	+		OKGIIK_16395	0.18	+1.3
3,601,264	+		OKGIIK_16395	0.18	+0.9
3,601,265	-		OKGIIK_16395	0.18	+0.2
3,601,265	-		OKGIIK_16395	0.18	+0.6
3,601,265	-		OKGIIK_16395	0.18	-0.7
3,601,265	-		OKGIIK_16395	0.18	-1.1
3,601,265	-		OKGIIK_16395	0.18	-0.3
3,601,300	+		OKGIIK_16395	0.19	-0.4
3,601,300	+		OKGIIK_16395	0.19	-0.7
3,601,300	+		OKGIIK_16395	0.19	-0.7
3,601,300	+		OKGIIK_16395	0.19	-1.1
3,601,300	+		OKGIIK_16395	0.19	+0.3
3,601,300	+		OKGIIK_16395	0.19	-1.8
3,601,300	+		OKGIIK_16395	0.19	+0.9
3,601,300	+		OKGIIK_16395	0.19	-0.7
3,601,300	+		OKGIIK_16395	0.19	-1.7
3,601,300	+		OKGIIK_16395	0.19	-2.9
3,601,300	+		OKGIIK_16395	0.19	-0.3
3,601,300	+		OKGIIK_16395	0.19	-0.6
3,601,301	-		OKGIIK_16395	0.19	-0.7
3,601,301	-		OKGIIK_16395	0.19	+0.3
3,601,301	-		OKGIIK_16395	0.19	+0.8
3,601,301	-		OKGIIK_16395	0.19	+1.2
3,601,301	-		OKGIIK_16395	0.19	+1.5
3,601,301	-		OKGIIK_16395	0.19	+0.3
3,601,301	-		OKGIIK_16395	0.19	-0.7
3,601,301	-		OKGIIK_16395	0.19	+0.2
3,601,301	-		OKGIIK_16395	0.19	-0.7
3,601,301	-		OKGIIK_16395	0.19	+0.9
3,601,301	-		OKGIIK_16395	0.19	-0.7
3,601,301	-		OKGIIK_16395	0.19	-2.4
3,601,301	-		OKGIIK_16395	0.19	-0.1
3,601,301	-		OKGIIK_16395	0.19	+0.7
3,601,445	-		OKGIIK_16395	0.26	+0.7
3,601,525	+		OKGIIK_16395	0.30	+0.9
3,601,525	+		OKGIIK_16395	0.30	-0.1
3,601,525	+		OKGIIK_16395	0.30	-0.4
3,601,525	+		OKGIIK_16395	0.30	+0.8
3,601,525	+		OKGIIK_16395	0.30	-0.1
3,601,525	+		OKGIIK_16395	0.30	-1.1
3,601,526	-		OKGIIK_16395	0.30	+1.3
3,601,526	-		OKGIIK_16395	0.30	-1.4
3,601,526	-		OKGIIK_16395	0.30	+1.2
3,601,526	-		OKGIIK_16395	0.30	+2.2
3,601,526	-		OKGIIK_16395	0.30	+0.0
3,601,526	-		OKGIIK_16395	0.30	-0.2
3,601,573	+		OKGIIK_16395	0.33	-1.5
3,601,574	-		OKGIIK_16395	0.33	+1.1
3,601,574	-		OKGIIK_16395	0.33	+0.9
3,601,574	-		OKGIIK_16395	0.33	-2.1
3,601,574	-		OKGIIK_16395	0.33	+0.7
3,601,574	-		OKGIIK_16395	0.33	+0.3
3,601,684	+		OKGIIK_16395	0.38	+0.4
3,601,684	+		OKGIIK_16395	0.38	-2.4
3,601,684	+		OKGIIK_16395	0.38	+0.5
3,601,684	+		OKGIIK_16395	0.38	+0.8
3,601,684	+		OKGIIK_16395	0.38	+0.3
3,601,685	-		OKGIIK_16395	0.38	-0.7
3,601,685	-		OKGIIK_16395	0.38	+3.5
3,601,685	-		OKGIIK_16395	0.38	+1.3
3,601,685	-		OKGIIK_16395	0.38	+1.4
3,601,685	-		OKGIIK_16395	0.38	+2.5
3,601,685	-		OKGIIK_16395	0.38	+0.3
3,601,774	+		OKGIIK_16395	0.43	+3.2