Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14260

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
3,108,471	+				-0.5
3,108,471	+				+0.3
3,108,471	+				-0.3
3,108,471	+				+1.9
3,108,471	+				-0.7
3,108,471	+				+0.3
3,108,471	+				-1.3
3,108,471	+				-1.7
3,108,471	+				+0.9
3,108,472	-				+0.3
3,108,472	-				-0.7
3,108,472	-				+0.6
3,108,472	-				-0.3
3,108,472	-				+0.1
3,108,472	-				+1.2
3,108,472	-				+0.6
3,108,472	-				+0.3
3,108,472	-				-0.9
3,108,472	-				-1.4
3,108,472	-				+0.6
3,108,472	-				-0.5
3,108,472	-				+0.3
3,108,472	-				-0.1
3,108,472	-				-0.9
3,108,472	-				-1.4
3,108,472	-				-2.0
3,108,472	-				-0.3
3,108,472	-				-0.7
3,108,472	-				-0.3
3,108,472	-				-0.1
3,108,472	-				+0.2
3,108,695	+		OKGIIK_14255	0.21	+0.6
3,108,695	+		OKGIIK_14255	0.21	-1.4
3,108,696	-		OKGIIK_14255	0.21	-0.3
3,108,696	-		OKGIIK_14255	0.21	-1.4
3,108,696	-		OKGIIK_14255	0.21	-0.4
3,108,926	+		OKGIIK_14255	0.48	-3.6
3,108,926	+		OKGIIK_14255	0.48	-1.1
3,108,926	+		OKGIIK_14255	0.48	-0.1
3,109,126	+		OKGIIK_14255	0.71	-1.9
3,109,265	+		OKGIIK_14255	0.88	-0.6
3,109,265	+		OKGIIK_14255	0.88	-0.9
3,109,265	+		OKGIIK_14255	0.88	+1.3
3,109,265	+		OKGIIK_14255	0.88	-0.1
3,109,265	+		OKGIIK_14255	0.88	+0.3
3,109,265	+		OKGIIK_14255	0.88	-1.4
3,109,265	+		OKGIIK_14255	0.88	-0.2
3,109,265	+		OKGIIK_14255	0.88	+0.1
3,109,265	+		OKGIIK_14255	0.88	+1.3
3,109,265	+		OKGIIK_14255	0.88	+2.2
3,109,266	-		OKGIIK_14255	0.88	-1.4
3,109,266	-		OKGIIK_14255	0.88	-0.6
3,109,266	-		OKGIIK_14255	0.88	-0.1
3,109,266	-		OKGIIK_14255	0.88	-2.2
3,109,266	-		OKGIIK_14255	0.88	-1.0
3,109,266	-		OKGIIK_14255	0.88	+1.2
3,109,266	-		OKGIIK_14255	0.88	-1.1
3,109,266	-		OKGIIK_14255	0.88	-2.3
3,109,266	-		OKGIIK_14255	0.88	+0.1
3,109,266	-		OKGIIK_14255	0.88	-2.3
3,109,266	-		OKGIIK_14255	0.88	-0.9
3,109,266	-		OKGIIK_14255	0.88	-0.2
3,109,266	-		OKGIIK_14255	0.88	-2.1
3,109,266	-		OKGIIK_14255	0.88	+0.9
3,109,266	-		OKGIIK_14255	0.88	+0.5
3,109,266	-		OKGIIK_14255	0.88	+0.5
3,109,266	-		OKGIIK_14255	0.88	+1.7
3,109,364	+				+0.2
3,109,364	+				-0.6
3,109,364	+				+0.3
3,109,364	+				+0.9
3,109,364	+				-1.4
3,109,364	+				-1.1
3,109,364	+				-0.4
3,109,364	+				+0.6
3,109,364	+				+0.3
3,109,364	+				+0.6
3,109,364	+				-1.1
3,109,365	-				-1.7
3,109,365	-				-0.5
3,109,365	-				+0.7
3,109,365	-				-2.6
3,109,365	-				-1.1
3,109,365	-				+1.3
3,109,365	-				-0.8
3,109,365	-				-0.3
3,109,365	-				-0.8
3,109,365	-				-1.1
3,109,365	-				-0.4
3,109,365	-				+0.9
3,109,365	-				+0.1
3,109,365	-				+0.4
3,109,365	-				-1.4
3,109,365	-				-0.1
3,109,452	+				+0.9
3,109,453	-				+0.1
3,109,671	+		OKGIIK_14260	0.28	+0.9
3,109,671	+		OKGIIK_14260	0.28	-0.1
3,109,671	+		OKGIIK_14260	0.28	-0.4
3,109,671	+		OKGIIK_14260	0.28	-0.8
3,109,671	+		OKGIIK_14260	0.28	+2.2
3,109,671	+		OKGIIK_14260	0.28	+0.1
3,109,671	+		OKGIIK_14260	0.28	+0.6
3,109,671	+		OKGIIK_14260	0.28	-0.9
3,109,671	+		OKGIIK_14260	0.28	+0.5
3,109,672	-		OKGIIK_14260	0.29	-0.4
3,109,672	-		OKGIIK_14260	0.29	+0.2
3,109,672	-		OKGIIK_14260	0.29	+0.3
3,109,672	-		OKGIIK_14260	0.29	+1.4
3,109,672	-		OKGIIK_14260	0.29	-1.1
3,109,672	-		OKGIIK_14260	0.29	+0.9
3,109,672	-		OKGIIK_14260	0.29	-1.3
3,109,734	+		OKGIIK_14260	0.36	+1.9
3,109,734	+		OKGIIK_14260	0.36	+1.9
3,109,734	+		OKGIIK_14260	0.36	+1.3
3,109,783	-		OKGIIK_14260	0.41	+0.9
3,109,801	+		OKGIIK_14260	0.43	+0.2
3,109,801	+		OKGIIK_14260	0.43	-0.9
3,109,801	+		OKGIIK_14260	0.43	-1.7
3,109,801	+		OKGIIK_14260	0.43	+0.9
3,109,802	-		OKGIIK_14260	0.44	-2.9
3,109,802	-		OKGIIK_14260	0.44	+0.6
3,109,899	+		OKGIIK_14260	0.55	+0.3
3,109,899	+		OKGIIK_14260	0.55	-0.8
3,109,899	+		OKGIIK_14260	0.55	+0.2
3,109,899	+		OKGIIK_14260	0.55	+0.6
3,109,899	+		OKGIIK_14260	0.55	-1.4
3,109,899	+		OKGIIK_14260	0.55	-2.3
3,109,899	+		OKGIIK_14260	0.55	+0.2
3,109,899	+		OKGIIK_14260	0.55	+0.5
3,109,899	+		OKGIIK_14260	0.55	+0.2
3,109,899	+		OKGIIK_14260	0.55	+0.3
3,109,899	+		OKGIIK_14260	0.55	+0.3
3,109,900	-		OKGIIK_14260	0.55	-0.4
3,109,900	-		OKGIIK_14260	0.55	+0.1
3,109,900	-		OKGIIK_14260	0.55	+1.2
3,109,900	-		OKGIIK_14260	0.55	+0.2
3,109,900	-		OKGIIK_14260	0.55	+1.3
3,109,900	-		OKGIIK_14260	0.55	+1.7
3,109,900	-		OKGIIK_14260	0.55	+0.3
3,109,900	-		OKGIIK_14260	0.55	-1.3
3,109,900	-		OKGIIK_14260	0.55	-1.7
3,109,900	-		OKGIIK_14260	0.55	+1.6
3,109,900	-		OKGIIK_14260	0.55	-0.9
3,109,900	-		OKGIIK_14260	0.55	+0.6
3,109,900	-		OKGIIK_14260	0.55	+1.1
3,109,979	+		OKGIIK_14260	0.64	+0.6
3,109,979	+		OKGIIK_14260	0.64	-0.2
3,109,979	+		OKGIIK_14260	0.64	+0.1
3,109,979	+		OKGIIK_14260	0.64	-0.2
3,109,980	-		OKGIIK_14260	0.64	+0.1
3,110,046	+		OKGIIK_14260	0.72	-0.9
3,110,047	-		OKGIIK_14260	0.72	-0.3
3,110,047	-		OKGIIK_14260	0.72	-0.1
3,110,047	-		OKGIIK_14260	0.72	+0.7
3,110,047	-		OKGIIK_14260	0.72	-0.1
3,110,047	-		OKGIIK_14260	0.72	+0.5
3,110,047	-		OKGIIK_14260	0.72	-0.4
3,110,047	-		OKGIIK_14260	0.72	-0.5
3,110,084	-		OKGIIK_14260	0.76	+0.3
3,110,178	+		OKGIIK_14260	0.87	-1.7
3,110,235	+				-1.5
3,110,235	+				-0.4
3,110,235	+				+0.8
3,110,235	+				+2.7
3,110,235	+				-0.7
3,110,235	+				+2.5
3,110,235	+				+1.0
3,110,235	+				-0.1
3,110,235	+				-1.1
3,110,235	+				+0.1
3,110,235	+				-1.2
3,110,235	+				+1.1
3,110,235	+				+0.2
3,110,235	+				+0.6
3,110,235	+				-0.3
3,110,235	+				-0.7
3,110,236	-				-0.3
3,110,236	-				+0.3
3,110,236	-				-0.1
3,110,236	-				+0.6
3,110,236	-				+0.5
3,110,236	-				+0.7
3,110,236	-				+0.3
3,110,245	+				+0.6
3,110,245	+				+0.1
3,110,245	+				+0.5
3,110,245	+				-0.3
3,110,245	+				+0.1
3,110,246	-				-0.9
3,110,246	-				+2.5
3,110,246	-				-1.4
3,110,246	-				+0.1
3,110,246	-				-0.7
3,110,246	-				-0.1
3,110,246	-				+0.9
3,110,363	-				-1.7
3,110,383	+				+0.7
3,110,384	-				-0.5
3,110,769	+		OKGIIK_14265	0.42	+0.9
3,110,770	-		OKGIIK_14265	0.42	+0.3
3,110,770	-		OKGIIK_14265	0.42	-1.2
3,110,850	+		OKGIIK_14265	0.52	+0.9
3,110,850	+		OKGIIK_14265	0.52	-0.9
3,110,850	+		OKGIIK_14265	0.52	+1.1
3,110,850	+		OKGIIK_14265	0.52	+0.7
3,110,850	+		OKGIIK_14265	0.52	+0.9
3,110,851	-		OKGIIK_14265	0.52	-1.0
3,110,851	-		OKGIIK_14265	0.52	+1.3
3,110,851	-		OKGIIK_14265	0.52	-0.9
3,110,851	-		OKGIIK_14265	0.52	-0.4
3,110,851	-		OKGIIK_14265	0.52	-2.6
3,110,851	-		OKGIIK_14265	0.52	-0.1
3,110,851	-		OKGIIK_14265	0.52	-1.1
3,110,851	-		OKGIIK_14265	0.52	-0.1
3,110,851	-		OKGIIK_14265	0.52	+0.7
3,110,851	-		OKGIIK_14265	0.52	+0.1
3,110,891	+		OKGIIK_14265	0.57	-1.0
3,110,891	+		OKGIIK_14265	0.57	+0.7
3,110,891	+		OKGIIK_14265	0.57	+1.8
3,110,892	-		OKGIIK_14265	0.57	+0.4
3,110,922	+		OKGIIK_14265	0.60	-1.1
3,110,922	+		OKGIIK_14265	0.60	-0.1
3,110,923	-		OKGIIK_14265	0.60	+0.3
3,110,923	-		OKGIIK_14265	0.60	-1.7
3,110,923	-		OKGIIK_14265	0.60	-0.0
3,110,923	-		OKGIIK_14265	0.60	-0.1
3,111,012	+		OKGIIK_14265	0.71	-0.1
3,111,012	+		OKGIIK_14265	0.71	+0.5
3,111,012	+		OKGIIK_14265	0.71	+0.5
3,111,012	+		OKGIIK_14265	0.71	-0.2
3,111,013	-		OKGIIK_14265	0.71	-0.5
3,111,013	-		OKGIIK_14265	0.71	-0.3
3,111,013	-		OKGIIK_14265	0.71	+0.7
3,111,013	-		OKGIIK_14265	0.71	-0.2
3,111,013	-		OKGIIK_14265	0.71	-0.5
3,111,013	-		OKGIIK_14265	0.71	-1.6
3,111,108	+		OKGIIK_14265	0.82	-0.4
3,111,108	+		OKGIIK_14265	0.82	+1.9
3,111,108	+		OKGIIK_14265	0.82	+0.9
3,111,108	+		OKGIIK_14265	0.82	-0.1
3,111,108	+		OKGIIK_14265	0.82	+0.5
3,111,108	+		OKGIIK_14265	0.82	-1.9
3,111,108	+		OKGIIK_14265	0.82	-0.1
3,111,108	+		OKGIIK_14265	0.82	-0.2
3,111,108	+		OKGIIK_14265	0.82	-0.2
3,111,108	+		OKGIIK_14265	0.82	-0.4
3,111,109	-		OKGIIK_14265	0.82	+0.5
3,111,109	-		OKGIIK_14265	0.82	-1.4
3,111,109	-		OKGIIK_14265	0.82	-0.0
3,111,109	-		OKGIIK_14265	0.82	-2.6
3,111,109	-		OKGIIK_14265	0.82	+0.2
3,111,109	-		OKGIIK_14265	0.82	+1.2
3,111,109	-		OKGIIK_14265	0.82	-0.1
3,111,109	-		OKGIIK_14265	0.82	-0.4
3,111,109	-		OKGIIK_14265	0.82	-1.1
3,111,109	-		OKGIIK_14265	0.82	+0.9
3,111,109	-		OKGIIK_14265	0.82	+2.7
3,111,109	-		OKGIIK_14265	0.82	+0.6
3,111,109	-		OKGIIK_14265	0.82	-0.1
3,111,109	-		OKGIIK_14265	0.82	-0.7
3,111,109	-		OKGIIK_14265	0.82	+0.4
3,111,109	-		OKGIIK_14265	0.82	-0.0
3,111,109	-		OKGIIK_14265	0.82	+1.4
3,111,109	-		OKGIIK_14265	0.82	-0.6
3,111,288	+				-1.7
3,111,288	+				+1.0
3,111,288	+				-0.7
3,111,288	+				+1.6
3,111,288	+				-0.1
3,111,288	+				-1.0
3,111,288	+				+0.3
3,111,288	+				-1.1
3,111,289	-				+0.9
3,111,289	-				-0.1