Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13940

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
3,027,304	+		OKGIIK_13930	0.84	+0.9
3,027,304	+		OKGIIK_13930	0.84	+0.3
3,027,305	-		OKGIIK_13930	0.84	-0.7
3,027,305	-		OKGIIK_13930	0.84	+0.7
3,027,361	+		OKGIIK_13930	0.88	+0.5
3,027,361	+		OKGIIK_13930	0.88	+0.2
3,027,361	+		OKGIIK_13930	0.88	+0.1
3,027,361	+		OKGIIK_13930	0.88	+0.5
3,027,361	+		OKGIIK_13930	0.88	-0.4
3,027,361	+		OKGIIK_13930	0.88	+3.5
3,027,362	-		OKGIIK_13930	0.88	+0.9
3,027,362	-		OKGIIK_13930	0.88	+0.2
3,027,362	-		OKGIIK_13930	0.88	-0.1
3,027,362	-		OKGIIK_13930	0.88	+0.6
3,027,362	-		OKGIIK_13930	0.88	+0.3
3,027,362	-		OKGIIK_13930	0.88	+0.2
3,027,508	+				+1.6
3,027,509	-				+0.9
3,027,523	+				+0.7
3,027,524	-				-0.3
3,027,533	+				+0.9
3,027,533	+				+0.5
3,027,534	-				-0.7
3,027,534	-				-0.1
3,027,572	+				-0.2
3,027,572	+				+0.4
3,027,572	+				-0.7
3,027,572	+				+2.1
3,027,573	-				+0.6
3,027,573	-				+1.9
3,027,573	-				-2.1
3,027,573	-				+0.8
3,027,608	+		OKGIIK_13935	0.15	+1.9
3,027,609	-		OKGIIK_13935	0.15	-0.4
3,027,609	-		OKGIIK_13935	0.15	+0.2
3,027,851	+		OKGIIK_13935	0.65	-2.7
3,027,851	+		OKGIIK_13935	0.65	+0.2
3,027,851	+		OKGIIK_13935	0.65	+0.3
3,027,851	+		OKGIIK_13935	0.65	+0.4
3,027,851	+		OKGIIK_13935	0.65	+0.4
3,027,851	+		OKGIIK_13935	0.65	+0.5
3,027,851	+		OKGIIK_13935	0.65	-0.5
3,027,851	+		OKGIIK_13935	0.65	+2.5
3,027,851	+		OKGIIK_13935	0.65	-0.7
3,027,851	+		OKGIIK_13935	0.65	+1.6
3,027,852	-		OKGIIK_13935	0.65	+0.6
3,027,852	-		OKGIIK_13935	0.65	-0.0
3,027,852	-		OKGIIK_13935	0.65	-0.3
3,027,852	-		OKGIIK_13935	0.65	-1.4
3,027,852	-		OKGIIK_13935	0.65	-3.1
3,027,852	-		OKGIIK_13935	0.65	+0.3
3,027,852	-		OKGIIK_13935	0.65	+0.6
3,027,852	-		OKGIIK_13935	0.65	+1.3
3,027,852	-		OKGIIK_13935	0.65	+0.9
3,027,852	-		OKGIIK_13935	0.65	+1.5
3,027,920	+		OKGIIK_13935	0.79	+0.1
3,028,051	+				-2.8
3,028,051	+				-0.7
3,028,051	+				+0.7
3,028,051	+				-1.7
3,028,051	+				-0.1
3,028,051	+				-0.6
3,028,051	+				+0.1
3,028,051	+				-1.7
3,028,051	+				+1.5
3,028,052	-				-0.1
3,028,052	-				+0.7
3,028,052	-				-1.1
3,028,052	-				-2.1
3,028,052	-				-0.9
3,028,052	-				+0.5
3,028,052	-				-0.3
3,028,052	-				-0.1
3,028,052	-				+0.9
3,028,052	-				-0.9
3,028,052	-				-1.7
3,028,158	+				+0.3
3,028,158	+				-1.4
3,028,158	+				-1.1
3,028,158	+				+0.5
3,028,158	+				+0.6
3,028,159	-				-0.7
3,028,159	-				+0.6
3,028,159	-				+1.8
3,028,159	-				-0.1
3,028,159	-				-1.0
3,028,159	-				-0.1
3,028,159	-				+1.5
3,028,159	-				+1.6
3,028,172	-				-1.3
3,028,317	+		OKGIIK_13940	0.12	+0.3
3,028,465	+		OKGIIK_13940	0.27	-0.2
3,028,465	+		OKGIIK_13940	0.27	+0.8
3,028,465	+		OKGIIK_13940	0.27	+0.6
3,028,465	+		OKGIIK_13940	0.27	-0.3
3,028,465	+		OKGIIK_13940	0.27	+0.1
3,028,465	+		OKGIIK_13940	0.27	+0.6
3,028,466	-		OKGIIK_13940	0.27	-0.5
3,028,466	-		OKGIIK_13940	0.27	-0.3
3,028,466	-		OKGIIK_13940	0.27	-1.1
3,028,466	-		OKGIIK_13940	0.27	-0.1
3,028,466	-		OKGIIK_13940	0.27	+1.6
3,028,498	+		OKGIIK_13940	0.30	+1.8
3,028,498	+		OKGIIK_13940	0.30	-1.6
3,028,498	+		OKGIIK_13940	0.30	+0.8
3,028,498	+		OKGIIK_13940	0.30	-1.1
3,028,498	+		OKGIIK_13940	0.30	-0.1
3,028,498	+		OKGIIK_13940	0.30	-0.1
3,028,498	+		OKGIIK_13940	0.30	+0.9
3,028,499	-		OKGIIK_13940	0.30	+0.2
3,028,499	-		OKGIIK_13940	0.30	+0.3
3,028,499	-		OKGIIK_13940	0.30	-3.0
3,028,507	+		OKGIIK_13940	0.31	-0.6
3,028,507	+		OKGIIK_13940	0.31	+0.7
3,028,508	-		OKGIIK_13940	0.31	-0.4
3,028,508	-		OKGIIK_13940	0.31	-0.2
3,028,739	+		OKGIIK_13940	0.54	+0.1
3,028,783	+		OKGIIK_13940	0.59	-2.4
3,028,783	+		OKGIIK_13940	0.59	+1.5
3,028,783	+		OKGIIK_13940	0.59	+1.9
3,028,783	+		OKGIIK_13940	0.59	+0.5
3,028,784	-		OKGIIK_13940	0.59	+3.2
3,028,784	-		OKGIIK_13940	0.59	-0.5
3,028,784	-		OKGIIK_13940	0.59	+0.7
3,028,822	+		OKGIIK_13940	0.62	+0.3
3,028,822	+		OKGIIK_13940	0.62	+0.2
3,028,822	+		OKGIIK_13940	0.62	+0.5
3,028,822	+		OKGIIK_13940	0.62	+1.5
3,028,822	+		OKGIIK_13940	0.62	-0.2
3,028,822	+		OKGIIK_13940	0.62	+1.3
3,028,823	-		OKGIIK_13940	0.63	-1.9
3,028,823	-		OKGIIK_13940	0.63	+0.9
3,028,823	-		OKGIIK_13940	0.63	+0.5
3,028,823	-		OKGIIK_13940	0.63	+1.3
3,028,823	-		OKGIIK_13940	0.63	+1.0
3,028,835	+		OKGIIK_13940	0.64	-0.1
3,028,835	+		OKGIIK_13940	0.64	+0.3
3,028,835	+		OKGIIK_13940	0.64	+0.5
3,028,835	+		OKGIIK_13940	0.64	+1.0
3,028,836	-		OKGIIK_13940	0.64	-0.7
3,028,836	-		OKGIIK_13940	0.64	+0.5
3,028,848	+		OKGIIK_13940	0.65	-2.1
3,029,195	-				+1.5
3,029,195	-				-0.3
3,029,195	-				-0.8
3,029,195	-				+1.5
3,029,195	-				+1.4
3,029,300	+				+0.9
3,029,300	+				+0.2
3,029,300	+				-0.7
3,029,300	+				-1.4
3,029,300	+				+0.1
3,029,300	+				-0.1
3,029,300	+				-2.1
3,029,301	-				-0.1
3,029,301	-				-1.7
3,029,301	-				+0.2
3,029,301	-				-2.1
3,029,393	+		OKGIIK_13945	0.15	+0.2
3,029,394	-		OKGIIK_13945	0.15	+1.6
3,029,394	-		OKGIIK_13945	0.15	-1.1
3,029,489	+		OKGIIK_13945	0.22	+0.2
3,029,489	+		OKGIIK_13945	0.22	+0.9
3,029,490	-		OKGIIK_13945	0.22	+0.5
3,029,490	-		OKGIIK_13945	0.22	-1.3
3,029,490	-		OKGIIK_13945	0.22	+1.5
3,029,582	+		OKGIIK_13945	0.29	+0.7
3,029,582	+		OKGIIK_13945	0.29	+0.9
3,029,582	+		OKGIIK_13945	0.29	-1.7
3,029,582	+		OKGIIK_13945	0.29	-0.0
3,029,583	-		OKGIIK_13945	0.29	-0.6
3,029,583	-		OKGIIK_13945	0.29	-1.1
3,029,639	+		OKGIIK_13945	0.33	+0.5
3,029,639	+		OKGIIK_13945	0.33	-0.1
3,029,640	-		OKGIIK_13945	0.34	+0.2
3,029,640	-		OKGIIK_13945	0.34	-0.6
3,029,640	-		OKGIIK_13945	0.34	-0.4
3,029,640	-		OKGIIK_13945	0.34	-0.2
3,029,837	+		OKGIIK_13945	0.49	-0.1
3,029,837	+		OKGIIK_13945	0.49	-0.6
3,029,837	+		OKGIIK_13945	0.49	+0.9
3,029,837	+		OKGIIK_13945	0.49	+2.7
3,029,837	+		OKGIIK_13945	0.49	+0.4
3,029,837	+		OKGIIK_13945	0.49	-0.3
3,029,837	+		OKGIIK_13945	0.49	+0.9
3,029,837	+		OKGIIK_13945	0.49	+0.1
3,029,837	+		OKGIIK_13945	0.49	+0.1
3,029,837	+		OKGIIK_13945	0.49	-2.3
3,029,838	-		OKGIIK_13945	0.49	-0.3
3,029,838	-		OKGIIK_13945	0.49	+0.5
3,029,838	-		OKGIIK_13945	0.49	+2.9
3,029,838	-		OKGIIK_13945	0.49	+0.2
3,030,077	-		OKGIIK_13945	0.67	+0.5
3,030,170	+		OKGIIK_13945	0.74	-0.7
3,030,170	+		OKGIIK_13945	0.74	-2.3
3,030,170	+		OKGIIK_13945	0.74	-1.3
3,030,170	+		OKGIIK_13945	0.74	+1.5
3,030,171	-		OKGIIK_13945	0.74	+0.8
3,030,171	-		OKGIIK_13945	0.74	-0.4
3,030,171	-		OKGIIK_13945	0.74	-0.1
3,030,171	-		OKGIIK_13945	0.74	-0.7
3,030,171	-		OKGIIK_13945	0.74	+0.5