Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13225

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
2,853,634	+		OKGIIK_13220	0.30	-0.3
2,853,634	+		OKGIIK_13220	0.30	-1.1
2,853,634	+		OKGIIK_13220	0.30	+0.2
2,853,635	-		OKGIIK_13220	0.30	-1.4
2,853,640	+		OKGIIK_13220	0.30	-1.2
2,853,640	+		OKGIIK_13220	0.30	+1.9
2,853,640	+		OKGIIK_13220	0.30	-0.8
2,853,640	+		OKGIIK_13220	0.30	-0.7
2,853,640	+		OKGIIK_13220	0.30	+0.2
2,853,640	+		OKGIIK_13220	0.30	-0.5
2,853,640	+		OKGIIK_13220	0.30	-0.1
2,853,640	+		OKGIIK_13220	0.30	+1.4
2,853,640	+		OKGIIK_13220	0.30	+0.4
2,853,640	+		OKGIIK_13220	0.30	+1.2
2,853,640	+		OKGIIK_13220	0.30	-0.8
2,853,640	+		OKGIIK_13220	0.30	+0.5
2,853,640	+		OKGIIK_13220	0.30	-0.1
2,853,640	+		OKGIIK_13220	0.30	+0.5
2,853,640	+		OKGIIK_13220	0.30	-0.9
2,853,640	+		OKGIIK_13220	0.30	-1.3
2,853,640	+		OKGIIK_13220	0.30	-1.1
2,853,640	+		OKGIIK_13220	0.30	+1.5
2,853,641	-		OKGIIK_13220	0.31	-1.1
2,853,641	-		OKGIIK_13220	0.31	+1.4
2,853,641	-		OKGIIK_13220	0.31	+1.6
2,853,641	-		OKGIIK_13220	0.31	-2.6
2,853,641	-		OKGIIK_13220	0.31	-1.1
2,853,641	-		OKGIIK_13220	0.31	+1.5
2,853,641	-		OKGIIK_13220	0.31	-0.8
2,853,641	-		OKGIIK_13220	0.31	+0.3
2,853,641	-		OKGIIK_13220	0.31	-1.8
2,853,641	-		OKGIIK_13220	0.31	-2.4
2,853,641	-		OKGIIK_13220	0.31	+2.1
2,853,641	-		OKGIIK_13220	0.31	+0.6
2,853,641	-		OKGIIK_13220	0.31	-0.4
2,853,641	-		OKGIIK_13220	0.31	-0.4
2,853,641	-		OKGIIK_13220	0.31	-2.6
2,853,641	-		OKGIIK_13220	0.31	-0.1
2,853,641	-		OKGIIK_13220	0.31	-0.6
2,853,641	-		OKGIIK_13220	0.31	-0.1
2,853,641	-		OKGIIK_13220	0.31	+0.9
2,853,641	-		OKGIIK_13220	0.31	+0.3
2,853,641	-		OKGIIK_13220	0.31	-0.1
2,853,641	-		OKGIIK_13220	0.31	-1.7
2,853,641	-		OKGIIK_13220	0.31	+0.9
2,853,646	+		OKGIIK_13220	0.31	-0.1
2,853,646	+		OKGIIK_13220	0.31	-1.1
2,853,646	+		OKGIIK_13220	0.31	-3.5
2,853,646	+		OKGIIK_13220	0.31	-1.4
2,853,646	+		OKGIIK_13220	0.31	-0.8
2,853,646	+		OKGIIK_13220	0.31	+0.3
2,853,646	+		OKGIIK_13220	0.31	+0.2
2,853,646	+		OKGIIK_13220	0.31	-0.3
2,853,646	+		OKGIIK_13220	0.31	+3.1
2,853,646	+		OKGIIK_13220	0.31	+0.9
2,853,646	+		OKGIIK_13220	0.31	-0.2
2,853,646	+		OKGIIK_13220	0.31	-0.9
2,853,646	+		OKGIIK_13220	0.31	-0.9
2,853,646	+		OKGIIK_13220	0.31	-0.6
2,853,646	+		OKGIIK_13220	0.31	-2.1
2,853,646	+		OKGIIK_13220	0.31	+0.9
2,853,646	+		OKGIIK_13220	0.31	-1.4
2,853,646	+		OKGIIK_13220	0.31	-1.8
2,853,646	+		OKGIIK_13220	0.31	-1.1
2,853,646	+		OKGIIK_13220	0.31	-0.8
2,853,646	+		OKGIIK_13220	0.31	-0.1
2,853,646	+		OKGIIK_13220	0.31	+0.2
2,853,646	+		OKGIIK_13220	0.31	-0.5
2,853,647	-		OKGIIK_13220	0.31	-2.6
2,853,647	-		OKGIIK_13220	0.31	-0.7
2,853,647	-		OKGIIK_13220	0.31	-0.2
2,853,647	-		OKGIIK_13220	0.31	+0.4
2,853,647	-		OKGIIK_13220	0.31	+2.2
2,853,647	-		OKGIIK_13220	0.31	+1.6
2,853,647	-		OKGIIK_13220	0.31	+1.5
2,853,647	-		OKGIIK_13220	0.31	-0.9
2,853,647	-		OKGIIK_13220	0.31	+0.7
2,853,647	-		OKGIIK_13220	0.31	-2.1
2,853,647	-		OKGIIK_13220	0.31	+0.4
2,853,647	-		OKGIIK_13220	0.31	+1.5
2,853,647	-		OKGIIK_13220	0.31	-1.0
2,853,647	-		OKGIIK_13220	0.31	-2.3
2,853,647	-		OKGIIK_13220	0.31	+1.1
2,853,647	-		OKGIIK_13220	0.31	-1.1
2,853,647	-		OKGIIK_13220	0.31	+0.8
2,853,647	-		OKGIIK_13220	0.31	-0.1
2,853,647	-		OKGIIK_13220	0.31	+1.9
2,853,647	-		OKGIIK_13220	0.31	+0.4
2,853,647	-		OKGIIK_13220	0.31	-1.1
2,853,647	-		OKGIIK_13220	0.31	-0.7
2,853,647	-		OKGIIK_13220	0.31	+0.7
2,853,647	-		OKGIIK_13220	0.31	-0.8
2,853,647	-		OKGIIK_13220	0.31	-0.1
2,853,647	-		OKGIIK_13220	0.31	+0.9
2,853,647	-		OKGIIK_13220	0.31	+0.5
2,853,647	-		OKGIIK_13220	0.31	-0.7
2,853,649	+		OKGIIK_13220	0.31	+0.2
2,853,649	+		OKGIIK_13220	0.31	-1.1
2,853,650	-		OKGIIK_13220	0.31	-0.7
2,853,650	-		OKGIIK_13220	0.31	-0.1
2,853,689	+		OKGIIK_13220	0.35	-1.9
2,853,697	+		OKGIIK_13220	0.36	-0.8
2,853,697	+		OKGIIK_13220	0.36	-1.2
2,853,698	-		OKGIIK_13220	0.36	-1.0
2,853,698	-		OKGIIK_13220	0.36	-0.9
2,853,698	-		OKGIIK_13220	0.36	+0.9
2,853,698	-		OKGIIK_13220	0.36	-0.5
2,853,730	+		OKGIIK_13220	0.39	-2.3
2,853,730	+		OKGIIK_13220	0.39	+0.3
2,853,730	+		OKGIIK_13220	0.39	-0.7
2,853,730	+		OKGIIK_13220	0.39	-0.5
2,853,730	+		OKGIIK_13220	0.39	-0.9
2,853,731	-		OKGIIK_13220	0.39	-1.9
2,853,731	-		OKGIIK_13220	0.39	+0.5
2,853,731	-		OKGIIK_13220	0.39	-1.1
2,853,731	-		OKGIIK_13220	0.39	+1.2
2,853,731	-		OKGIIK_13220	0.39	+0.3
2,853,731	-		OKGIIK_13220	0.39	-1.5
2,853,731	-		OKGIIK_13220	0.39	-0.1
2,853,979	+		OKGIIK_13220	0.64	+1.5
2,853,980	-		OKGIIK_13220	0.64	-2.7
2,854,090	+		OKGIIK_13220	0.75	-1.6
2,854,091	-		OKGIIK_13220	0.75	+2.1
2,854,243	+				-1.3
2,854,243	+				-1.5
2,854,243	+				-1.9
2,854,243	+				-2.4
2,854,243	+				-1.1
2,854,243	+				+0.3
2,854,243	+				-0.3
2,854,244	-				+0.3
2,854,244	-				+2.6
2,854,244	-				-0.4
2,854,244	-				+0.6
2,854,244	-				-2.1
2,854,244	-				-0.8
2,854,249	+				+0.9
2,854,249	+				+0.9
2,854,249	+				+0.7
2,854,249	+				-0.4
2,854,249	+				-0.1
2,854,249	+				-0.9
2,854,249	+				+0.6
2,854,249	+				+1.3
2,854,249	+				-1.8
2,854,249	+				+0.9
2,854,249	+				-1.3
2,854,249	+				-0.2
2,854,249	+				-1.8
2,854,249	+				-2.3
2,854,249	+				-2.3
2,854,249	+				-1.3
2,854,249	+				-1.1
2,854,249	+				+0.4
2,854,249	+				+0.3
2,854,249	+				+0.4
2,854,250	-				+0.9
2,854,250	-				-0.0
2,854,250	-				+1.1
2,854,250	-				-0.1
2,854,250	-				+0.7
2,854,250	-				-0.5
2,854,250	-				-0.1
2,854,250	-				-0.8
2,854,430	+		OKGIIK_13225	0.39	-0.4
2,854,431	-		OKGIIK_13225	0.40	+1.6
2,854,431	-		OKGIIK_13225	0.40	-3.4
2,854,431	-		OKGIIK_13225	0.40	-0.2
2,854,431	-		OKGIIK_13225	0.40	+1.2
2,854,431	-		OKGIIK_13225	0.40	-0.5
2,854,436	+		OKGIIK_13225	0.42	+0.6
2,854,436	+		OKGIIK_13225	0.42	+0.6
2,854,436	+		OKGIIK_13225	0.42	-3.9
2,854,437	-		OKGIIK_13225	0.43	+0.9
2,854,437	-		OKGIIK_13225	0.43	+0.7
2,854,437	-		OKGIIK_13225	0.43	+1.9
2,854,461	+		OKGIIK_13225	0.55	-1.1
2,854,461	+		OKGIIK_13225	0.55	+1.5
2,854,462	-		OKGIIK_13225	0.55	-0.2
2,854,462	-		OKGIIK_13225	0.55	-0.1
2,854,578	+				-0.5
2,854,578	+				+0.3
2,854,578	+				-1.8
2,854,578	+				+0.3
2,854,578	+				+0.5
2,854,578	+				-0.1
2,854,578	+				-1.3
2,854,578	+				+1.7
2,854,578	+				-0.4
2,854,578	+				+0.3
2,854,578	+				-1.3
2,854,578	+				-1.7
2,854,579	-				-0.7
2,854,579	-				-1.6
2,854,579	-				+0.4
2,854,579	-				-0.7
2,854,579	-				+1.9
2,854,579	-				-0.1
2,854,579	-				-1.1
2,854,579	-				+0.3
2,854,579	-				-0.8
2,854,579	-				+1.3
2,854,579	-				+0.3
2,854,915	+		OKGIIK_13230	0.18	+0.4
2,854,917	+		OKGIIK_13230	0.18	+1.2
2,854,917	+		OKGIIK_13230	0.18	-1.7
2,854,917	+		OKGIIK_13230	0.18	-0.4
2,854,917	+		OKGIIK_13230	0.18	+1.7
2,854,917	+		OKGIIK_13230	0.18	+0.2
2,854,917	+		OKGIIK_13230	0.18	-1.8
2,854,917	+		OKGIIK_13230	0.18	+0.3
2,854,917	+		OKGIIK_13230	0.18	-0.5
2,854,917	+		OKGIIK_13230	0.18	+0.5
2,854,917	+		OKGIIK_13230	0.18	+1.6
2,854,917	+		OKGIIK_13230	0.18	-0.1
2,854,917	+		OKGIIK_13230	0.18	+0.4
2,854,917	+		OKGIIK_13230	0.18	-0.3
2,854,917	+		OKGIIK_13230	0.18	-0.1
2,854,917	+		OKGIIK_13230	0.18	+0.3
2,854,917	+		OKGIIK_13230	0.18	-2.1
2,854,917	+		OKGIIK_13230	0.18	-2.2
2,854,917	+		OKGIIK_13230	0.18	+0.1
2,854,917	+		OKGIIK_13230	0.18	+2.3
2,854,917	+		OKGIIK_13230	0.18	-0.7
2,854,917	+		OKGIIK_13230	0.18	-0.7
2,854,917	+		OKGIIK_13230	0.18	+0.0
2,854,917	+		OKGIIK_13230	0.18	-1.7
2,854,917	+		OKGIIK_13230	0.18	+0.3
2,854,918	-		OKGIIK_13230	0.18	+1.3
2,854,918	-		OKGIIK_13230	0.18	-1.3
2,854,918	-		OKGIIK_13230	0.18	-0.3
2,854,918	-		OKGIIK_13230	0.18	-0.9
2,854,918	-		OKGIIK_13230	0.18	-0.1
2,854,918	-		OKGIIK_13230	0.18	-0.7
2,854,918	-		OKGIIK_13230	0.18	+0.2
2,854,918	-		OKGIIK_13230	0.18	-2.1
2,854,918	-		OKGIIK_13230	0.18	-0.1
2,854,918	-		OKGIIK_13230	0.18	-1.4
2,854,918	-		OKGIIK_13230	0.18	-1.1
2,854,918	-		OKGIIK_13230	0.18	+0.4
2,854,918	-		OKGIIK_13230	0.18	+0.5
2,854,918	-		OKGIIK_13230	0.18	-1.3
2,854,918	-		OKGIIK_13230	0.18	+0.9
2,854,918	-		OKGIIK_13230	0.18	+0.2
2,854,918	-		OKGIIK_13230	0.18	-0.3
2,854,918	-		OKGIIK_13230	0.18	-1.3
2,854,918	-		OKGIIK_13230	0.18	+0.9
2,854,918	-		OKGIIK_13230	0.18	-0.4
2,854,918	-		OKGIIK_13230	0.18	-1.9
2,854,918	-		OKGIIK_13230	0.18	+2.2
2,854,918	-		OKGIIK_13230	0.18	-1.1
2,854,918	-		OKGIIK_13230	0.18	-1.6
2,854,918	-		OKGIIK_13230	0.18	-1.0
2,854,918	-		OKGIIK_13230	0.18	+0.3
2,854,918	-		OKGIIK_13230	0.18	+1.5
2,854,918	-		OKGIIK_13230	0.18	-0.1
2,854,918	-		OKGIIK_13230	0.18	+0.7
2,854,918	-		OKGIIK_13230	0.18	+0.1
2,854,918	-		OKGIIK_13230	0.18	-0.4
2,854,918	-		OKGIIK_13230	0.18	-0.6
2,854,918	-		OKGIIK_13230	0.18	+1.5
2,854,918	-		OKGIIK_13230	0.18	+1.5
2,854,918	-		OKGIIK_13230	0.18	-0.1
2,854,918	-		OKGIIK_13230	0.18	-1.3
2,854,918	-		OKGIIK_13230	0.18	-0.7
2,854,918	-		OKGIIK_13230	0.18	-0.1
2,854,965	+		OKGIIK_13230	0.20	+0.5
2,854,966	-		OKGIIK_13230	0.20	+1.9
2,854,966	-		OKGIIK_13230	0.20	-0.3
2,854,966	-		OKGIIK_13230	0.20	+0.4
2,854,966	-		OKGIIK_13230	0.20	+1.9
2,854,966	-		OKGIIK_13230	0.20	-0.4
2,855,145	+		OKGIIK_13230	0.28	+0.4
2,855,145	+		OKGIIK_13230	0.28	-1.3
2,855,145	+		OKGIIK_13230	0.28	+0.9
2,855,145	+		OKGIIK_13230	0.28	+0.2
2,855,145	+		OKGIIK_13230	0.28	-2.6
2,855,145	+		OKGIIK_13230	0.28	-2.6
2,855,145	+		OKGIIK_13230	0.28	+0.5
2,855,146	-		OKGIIK_13230	0.28	-1.2
2,855,146	-		OKGIIK_13230	0.28	+0.1
2,855,146	-		OKGIIK_13230	0.28	-0.3
2,855,146	-		OKGIIK_13230	0.28	-2.0
2,855,146	-		OKGIIK_13230	0.28	-0.0
2,855,146	-		OKGIIK_13230	0.28	+1.6
2,855,146	-		OKGIIK_13230	0.28	+0.0
2,855,146	-		OKGIIK_13230	0.28	+0.9
2,855,146	-		OKGIIK_13230	0.28	-0.5
2,855,146	-		OKGIIK_13230	0.28	-0.5
2,855,146	-		OKGIIK_13230	0.28	+0.9
2,855,193	+		OKGIIK_13230	0.31	-3.2
2,855,194	-		OKGIIK_13230	0.31	-0.2
2,855,194	-		OKGIIK_13230	0.31	-0.4
2,855,235	+		OKGIIK_13230	0.33	+0.2
2,855,235	+		OKGIIK_13230	0.33	-0.4
2,855,235	+		OKGIIK_13230	0.33	+1.4
2,855,235	+		OKGIIK_13230	0.33	-0.8
2,855,235	+		OKGIIK_13230	0.33	+1.3
2,855,235	+		OKGIIK_13230	0.33	-2.1
2,855,235	+		OKGIIK_13230	0.33	-0.3
2,855,235	+		OKGIIK_13230	0.33	-0.0
2,855,235	+		OKGIIK_13230	0.33	+2.7
2,855,235	+		OKGIIK_13230	0.33	-0.7
2,855,236	-		OKGIIK_13230	0.33	-0.1
2,855,236	-		OKGIIK_13230	0.33	-0.2
2,855,236	-		OKGIIK_13230	0.33	-0.7
2,855,236	-		OKGIIK_13230	0.33	-1.8
2,855,236	-		OKGIIK_13230	0.33	+1.3
2,855,236	-		OKGIIK_13230	0.33	-0.1
2,855,236	-		OKGIIK_13230	0.33	+0.9
2,855,236	-		OKGIIK_13230	0.33	+0.2
2,855,236	-		OKGIIK_13230	0.33	-0.4
2,855,236	-		OKGIIK_13230	0.33	-3.6
2,855,236	-		OKGIIK_13230	0.33	+0.6
2,855,236	-		OKGIIK_13230	0.33	-0.5
2,855,236	-		OKGIIK_13230	0.33	+0.3
2,855,283	+		OKGIIK_13230	0.35	-2.1
2,855,283	+		OKGIIK_13230	0.35	-0.2
2,855,284	-		OKGIIK_13230	0.35	-1.0
2,855,526	+		OKGIIK_13230	0.46	-0.1
2,855,527	-		OKGIIK_13230	0.46	+0.6
2,855,527	-		OKGIIK_13230	0.46	-1.1
2,855,527	-		OKGIIK_13230	0.46	+0.4