Experiment: R2A_PIPES pH 4.25
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ftsL and rsmH overlap by 4 nucleotides rsmH and mraZ are separated by 42 nucleotides mraZ and rsmI are separated by 780 nucleotides
OKGIIK_11715: ftsL - cell division protein FtsL, at 2,522,751 to 2,523,020
ftsL
OKGIIK_11720: rsmH - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 2,523,017 to 2,523,958
rsmH
OKGIIK_11725: mraZ - division/cell wall cluster transcriptional repressor MraZ, at 2,524,001 to 2,524,447
mraZ
OKGIIK_11735: rsmI - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 2,525,228 to 2,526,064
rsmI
Position (kb)
2524
2525 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.003 kb on - strand at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.336 kb on - strand, within mraZ at 2524.547 kb on - strand at 2524.547 kb on - strand at 2524.625 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2524.629 kb on - strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.150 kb on + strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.151 kb on - strand at 2525.208 kb on - strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.239 kb on + strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.240 kb on - strand at 2525.241 kb on + strand at 2525.241 kb on + strand at 2525.241 kb on + strand at 2525.242 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES pH 4.25 remove 2,524,003 - +0.9 2,524,003 - -0.3 2,524,003 - +1.0 2,524,003 - -0.3 2,524,003 - -1.0 2,524,003 - +1.0 2,524,003 - +2.1 2,524,336 - mraZ OKGIIK_11725 0.75 -0.6 2,524,336 - mraZ OKGIIK_11725 0.75 +1.0 2,524,336 - mraZ OKGIIK_11725 0.75 +0.0 2,524,336 - mraZ OKGIIK_11725 0.75 -1.1 2,524,336 - mraZ OKGIIK_11725 0.75 +0.0 2,524,336 - mraZ OKGIIK_11725 0.75 -1.0 2,524,336 - mraZ OKGIIK_11725 0.75 +0.1 2,524,336 - mraZ OKGIIK_11725 0.75 +0.6 2,524,336 - mraZ OKGIIK_11725 0.75 -0.5 2,524,336 - mraZ OKGIIK_11725 0.75 -0.1 2,524,336 - mraZ OKGIIK_11725 0.75 +1.0 2,524,336 - mraZ OKGIIK_11725 0.75 -0.3 2,524,336 - mraZ OKGIIK_11725 0.75 -0.3 2,524,547 - -0.2 2,524,547 - -0.5 2,524,625 - +0.0 2,524,629 - +0.2 2,524,629 - +0.2 2,524,629 - +1.5 2,524,629 - +0.4 2,525,150 + +0.7 2,525,150 + +0.2 2,525,150 + -2.5 2,525,150 + -1.3 2,525,151 - -2.2 2,525,151 - +0.0 2,525,151 - -2.5 2,525,151 - -0.8 2,525,151 - +0.6 2,525,151 - -0.3 2,525,208 - -1.1 2,525,239 + +0.3 2,525,239 + -0.3 2,525,239 + +0.2 2,525,239 + -1.3 2,525,239 + +1.0 2,525,239 + -0.2 2,525,239 + -0.1 2,525,239 + +0.9 2,525,239 + -0.5 2,525,239 + -0.5 2,525,240 - -1.8 2,525,240 - +1.4 2,525,240 - +0.0 2,525,240 - -1.0 2,525,240 - -2.3 2,525,240 - -0.0 2,525,240 - +0.0 2,525,240 - -0.3 2,525,241 + -1.5 2,525,241 + -0.6 2,525,241 + -0.4 2,525,242 - -0.7
Or see this region's nucleotide sequence