Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09850

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
2,122,284	+				-1.1
2,122,284	+				+0.0
2,122,284	+				-0.0
2,122,378	+				-1.9
2,122,378	+				+0.3
2,122,378	+				+0.4
2,122,378	+				-2.5
2,122,378	+				-0.5
2,122,378	+				-0.9
2,122,379	-				-1.1
2,122,379	-				-0.3
2,122,379	-				-1.8
2,122,379	-				+0.6
2,122,388	+				+0.5
2,122,388	+				+0.7
2,122,388	+				+0.8
2,122,389	-				-0.6
2,122,509	+		OKGIIK_09845	0.19	+1.2
2,122,509	+		OKGIIK_09845	0.19	-0.8
2,122,509	+		OKGIIK_09845	0.19	+0.3
2,122,509	+		OKGIIK_09845	0.19	-0.1
2,122,509	+		OKGIIK_09845	0.19	-1.5
2,122,510	-		OKGIIK_09845	0.19	+0.7
2,122,510	-		OKGIIK_09845	0.19	+0.7
2,122,510	-		OKGIIK_09845	0.19	+0.4
2,122,510	-		OKGIIK_09845	0.19	+1.0
2,122,510	-		OKGIIK_09845	0.19	+0.8
2,122,557	+		OKGIIK_09845	0.30	-0.2
2,122,557	+		OKGIIK_09845	0.30	+2.2
2,122,557	+		OKGIIK_09845	0.30	+0.2
2,122,557	+		OKGIIK_09845	0.30	-1.3
2,122,557	+		OKGIIK_09845	0.30	-0.3
2,122,557	+		OKGIIK_09845	0.30	+0.5
2,122,557	+		OKGIIK_09845	0.30	-0.1
2,122,558	-		OKGIIK_09845	0.30	+0.1
2,122,558	-		OKGIIK_09845	0.30	+1.1
2,122,558	-		OKGIIK_09845	0.30	-0.0
2,122,558	-		OKGIIK_09845	0.30	-1.0
2,122,558	-		OKGIIK_09845	0.30	+1.4
2,122,558	-		OKGIIK_09845	0.30	+1.6
2,122,558	-		OKGIIK_09845	0.30	+0.5
2,122,644	+		OKGIIK_09845	0.49	+0.3
2,122,644	+		OKGIIK_09845	0.49	+0.0
2,122,644	+		OKGIIK_09845	0.49	+1.2
2,122,645	-		OKGIIK_09845	0.49	+0.4
2,122,645	-		OKGIIK_09845	0.49	+1.5
2,122,645	-		OKGIIK_09845	0.49	-1.7
2,122,645	-		OKGIIK_09845	0.49	+0.3
2,122,645	-		OKGIIK_09845	0.49	+0.7
2,122,647	+		OKGIIK_09845	0.50	-0.2
2,122,647	+		OKGIIK_09845	0.50	-0.8
2,122,647	+		OKGIIK_09845	0.50	+0.5
2,122,647	+		OKGIIK_09845	0.50	-1.5
2,122,647	+		OKGIIK_09845	0.50	-0.0
2,122,647	+		OKGIIK_09845	0.50	-1.0
2,122,647	+		OKGIIK_09845	0.50	-2.0
2,122,647	+		OKGIIK_09845	0.50	+1.0
2,122,647	+		OKGIIK_09845	0.50	+0.0
2,122,647	+		OKGIIK_09845	0.50	+1.7
2,122,647	+		OKGIIK_09845	0.50	-1.7
2,122,647	+		OKGIIK_09845	0.50	+0.6
2,122,647	+		OKGIIK_09845	0.50	+1.5
2,122,647	+		OKGIIK_09845	0.50	+0.5
2,122,647	+		OKGIIK_09845	0.50	-0.3
2,122,647	+		OKGIIK_09845	0.50	+1.0
2,122,647	+		OKGIIK_09845	0.50	-0.5
2,122,647	+		OKGIIK_09845	0.50	+1.3
2,122,647	+		OKGIIK_09845	0.50	-0.1
2,122,647	+		OKGIIK_09845	0.50	+0.2
2,122,647	+		OKGIIK_09845	0.50	-1.1
2,122,647	+		OKGIIK_09845	0.50	-0.2
2,122,647	+		OKGIIK_09845	0.50	-0.8
2,122,647	+		OKGIIK_09845	0.50	-0.1
2,122,647	+		OKGIIK_09845	0.50	-0.2
2,122,647	+		OKGIIK_09845	0.50	+0.0
2,122,647	+		OKGIIK_09845	0.50	-0.5
2,122,648	-		OKGIIK_09845	0.50	-2.4
2,122,648	-		OKGIIK_09845	0.50	+1.9
2,122,648	-		OKGIIK_09845	0.50	+0.4
2,122,648	-		OKGIIK_09845	0.50	+1.7
2,122,648	-		OKGIIK_09845	0.50	-1.3
2,122,648	-		OKGIIK_09845	0.50	-0.1
2,122,648	-		OKGIIK_09845	0.50	-1.3
2,122,648	-		OKGIIK_09845	0.50	-0.2
2,122,648	-		OKGIIK_09845	0.50	+0.8
2,122,648	-		OKGIIK_09845	0.50	+0.4
2,122,648	-		OKGIIK_09845	0.50	-0.3
2,122,648	-		OKGIIK_09845	0.50	+0.2
2,122,648	-		OKGIIK_09845	0.50	-1.8
2,122,648	-		OKGIIK_09845	0.50	+0.0
2,122,648	-		OKGIIK_09845	0.50	+0.7
2,122,648	-		OKGIIK_09845	0.50	+1.4
2,122,648	-		OKGIIK_09845	0.50	-0.4
2,122,648	-		OKGIIK_09845	0.50	+0.4
2,122,648	-		OKGIIK_09845	0.50	-0.5
2,122,648	-		OKGIIK_09845	0.50	+0.2
2,122,648	-		OKGIIK_09845	0.50	+0.0
2,122,648	-		OKGIIK_09845	0.50	-0.0
2,122,648	-		OKGIIK_09845	0.50	+0.9
2,122,648	-		OKGIIK_09845	0.50	+0.7
2,122,648	-		OKGIIK_09845	0.50	-1.1
2,122,648	-		OKGIIK_09845	0.50	-1.0
2,122,648	-		OKGIIK_09845	0.50	-1.3
2,122,648	-		OKGIIK_09845	0.50	-0.7
2,122,648	-		OKGIIK_09845	0.50	+1.9
2,122,648	-		OKGIIK_09845	0.50	+1.0
2,122,648	-		OKGIIK_09845	0.50	+0.7
2,122,648	-		OKGIIK_09845	0.50	-1.8
2,122,648	-		OKGIIK_09845	0.50	-0.1
2,122,648	-		OKGIIK_09845	0.50	+0.9
2,122,648	-		OKGIIK_09845	0.50	-0.2
2,122,648	-		OKGIIK_09845	0.50	-0.0
2,122,648	-		OKGIIK_09845	0.50	+0.6
2,122,704	+		OKGIIK_09845	0.62	-0.0
2,122,704	+		OKGIIK_09845	0.62	-0.4
2,122,704	+		OKGIIK_09845	0.62	-1.3
2,122,704	+		OKGIIK_09845	0.62	-1.1
2,122,704	+		OKGIIK_09845	0.62	+0.6
2,122,704	+		OKGIIK_09845	0.62	-0.1
2,122,705	-		OKGIIK_09845	0.62	+0.6
2,122,705	-		OKGIIK_09845	0.62	-0.7
2,122,705	-		OKGIIK_09845	0.62	+1.9
2,122,705	-		OKGIIK_09845	0.62	-0.5
2,122,705	-		OKGIIK_09845	0.62	+0.7
2,122,845	+				-0.2
2,122,845	+				+0.2
2,122,845	+				-0.9
2,122,845	+				-0.2
2,122,845	+				+0.2
2,122,845	+				+0.0
2,122,845	+				+0.2
2,122,845	+				+0.2
2,122,845	+				+0.3
2,122,845	+				-1.5
2,122,845	+				+0.3
2,122,845	+				-0.2
2,122,846	-				-1.9
2,122,846	-				+0.3
2,122,846	-				+0.0
2,122,846	-				-0.0
2,122,846	-				-1.2
2,122,846	-				-0.5
2,122,846	-				+0.7
2,122,846	-				+0.9
2,122,846	-				+0.3
2,122,846	-				+0.4
2,122,920	+				+1.2
2,122,921	-				-0.5
2,122,921	-				-2.0
2,122,921	-				+1.8
2,122,921	-				+1.5
2,122,921	-				+0.4
2,122,999	+				+0.8
2,122,999	+				-1.0
2,122,999	+				-2.1
2,122,999	+				+0.4
2,122,999	+				-0.4
2,123,000	-				+0.7
2,123,000	-				+0.5
2,123,000	-				+0.8
2,123,000	-				-2.0
2,123,000	-				+1.0
2,123,000	-				+0.0
2,123,000	-				-0.8
2,123,000	-				+0.6
2,123,000	-				-1.3
2,123,001	+				-2.0
2,123,001	+				-1.3
2,123,001	+				-1.2
2,123,002	-				+1.3
2,123,002	-				-2.5
2,123,002	-				-0.4
2,123,002	-				+0.3
2,123,002	-				-1.6
2,123,002	-				-0.1
2,123,002	-				-0.4
2,123,002	-				-1.3
2,123,039	+				-0.3
2,123,039	+				+0.0
2,123,039	+				-0.8
2,123,039	+				+0.3
2,123,039	+				-0.7
2,123,039	+				+0.3
2,123,040	-				+0.9
2,123,040	-				-0.5
2,123,040	-				-0.4
2,123,040	-				+0.8
2,123,040	-				+1.8
2,123,040	-				+0.9
2,123,040	-				+1.6
2,123,098	+				-0.3
2,123,098	+				-0.2
2,123,098	+				-1.3
2,123,098	+				+0.8
2,123,099	-				-2.1
2,123,099	-				+0.7
2,123,099	-				-0.8
2,123,118	+				+0.7
2,123,118	+				-1.3
2,123,118	+				+0.6
2,123,118	+				-0.3
2,123,118	+				+0.6
2,123,118	+				+0.0
2,123,118	+				+0.7
2,123,118	+				-2.3
2,123,118	+				+0.5
2,123,118	+				-0.7
2,123,118	+				-0.2
2,123,119	-				-2.7
2,123,119	-				+0.7
2,123,119	-				-0.4
2,123,119	-				-0.1
2,123,119	-				+0.2
2,123,119	-				-1.4
2,123,119	-				+0.5
2,123,119	-				-0.3
2,123,308	+		OKGIIK_09850	0.35	+0.6
2,123,308	+		OKGIIK_09850	0.35	-1.1
2,123,308	+		OKGIIK_09850	0.35	-0.1
2,123,308	+		OKGIIK_09850	0.35	-1.1
2,123,308	+		OKGIIK_09850	0.35	-0.2
2,123,308	+		OKGIIK_09850	0.35	+0.6
2,123,308	+		OKGIIK_09850	0.35	-0.7
2,123,308	+		OKGIIK_09850	0.35	-1.3
2,123,308	+		OKGIIK_09850	0.35	-2.4
2,123,308	+		OKGIIK_09850	0.35	-0.5
2,123,308	+		OKGIIK_09850	0.35	-0.1
2,123,308	+		OKGIIK_09850	0.35	-1.0
2,123,309	-		OKGIIK_09850	0.35	+0.0
2,123,309	-		OKGIIK_09850	0.35	-2.5
2,123,309	-		OKGIIK_09850	0.35	+0.0
2,123,309	-		OKGIIK_09850	0.35	+0.0
2,123,309	-		OKGIIK_09850	0.35	-1.5
2,123,309	-		OKGIIK_09850	0.35	+0.4
2,123,404	+		OKGIIK_09850	0.50	-0.3
2,123,404	+		OKGIIK_09850	0.50	-0.4
2,123,404	+		OKGIIK_09850	0.50	-1.3
2,123,404	+		OKGIIK_09850	0.50	+0.8
2,123,405	-		OKGIIK_09850	0.50	-0.4
2,123,405	-		OKGIIK_09850	0.50	-0.2
2,123,563	+		OKGIIK_09850	0.73	+0.3
2,123,563	+		OKGIIK_09850	0.73	-0.1
2,123,563	+		OKGIIK_09850	0.73	-0.0
2,123,563	+		OKGIIK_09850	0.73	-1.1
2,123,563	+		OKGIIK_09850	0.73	-1.3
2,123,563	+		OKGIIK_09850	0.73	-0.1
2,123,563	+		OKGIIK_09850	0.73	-0.2
2,123,563	+		OKGIIK_09850	0.73	-1.5
2,123,563	+		OKGIIK_09850	0.73	+0.5
2,123,563	+		OKGIIK_09850	0.73	-1.3
2,123,563	+		OKGIIK_09850	0.73	+0.7
2,123,564	-		OKGIIK_09850	0.74	-0.7
2,123,564	-		OKGIIK_09850	0.74	-0.2
2,123,564	-		OKGIIK_09850	0.74	-2.1
2,123,564	-		OKGIIK_09850	0.74	-1.2
2,123,564	-		OKGIIK_09850	0.74	-0.6
2,123,564	-		OKGIIK_09850	0.74	-0.8
2,123,564	-		OKGIIK_09850	0.74	-0.4
2,123,564	-		OKGIIK_09850	0.74	-0.7
2,123,564	-		OKGIIK_09850	0.74	-2.0
2,123,564	-		OKGIIK_09850	0.74	+0.0
2,123,596	+		OKGIIK_09850	0.78	+0.3
2,123,694	+				+0.3
2,123,694	+				-0.1
2,123,695	-				-1.3
2,123,695	-				-0.5
2,123,737	+				-0.3
2,123,737	+				+1.2
2,123,737	+				-0.5
2,123,737	+				+0.6
2,123,737	+				-0.4
2,123,738	-				+1.0
2,123,738	-				-1.0
2,123,738	-				+0.1
2,123,761	+				+0.0
2,123,761	+				-0.7
2,123,791	+				-0.4
2,123,792	-				+0.5
2,123,792	-				-2.3
2,123,792	-				-0.5
2,123,792	-				-0.8
2,123,792	-				-1.0
2,123,792	-				-0.2
2,124,006	+		OKGIIK_09855	0.52	+0.0
2,124,007	-		OKGIIK_09855	0.52	-0.7
2,124,071	+		OKGIIK_09855	0.80	+0.6
2,124,150	-				+1.2
2,124,243	+				-0.2
2,124,243	+				-0.5
2,124,243	+				-0.8
2,124,244	-				-2.1
2,124,244	-				+0.0
2,124,244	-				+1.0
2,124,244	-				+0.5
2,124,244	-				-0.3
2,124,244	-				+0.5
2,124,244	-				-0.5
2,124,244	-				-0.5
2,124,244	-				-1.0
2,124,244	-				-1.3
2,124,244	-				-0.1
2,124,244	-				-0.4
2,124,244	-				-0.8
2,124,244	-				+1.3
2,124,244	-				+0.2
2,124,244	-				-2.1
2,124,275	-				-1.3
2,124,275	-				-2.5
2,124,738	+		OKGIIK_09860	0.24	-1.0
2,124,738	+		OKGIIK_09860	0.24	-0.5
2,124,738	+		OKGIIK_09860	0.24	-0.9
2,124,738	+		OKGIIK_09860	0.24	-1.3
2,124,738	+		OKGIIK_09860	0.24	-2.3
2,124,738	+		OKGIIK_09860	0.24	-0.8
2,124,738	+		OKGIIK_09860	0.24	+0.2
2,124,738	+		OKGIIK_09860	0.24	-0.1
2,124,739	-		OKGIIK_09860	0.24	+0.5
2,124,739	-		OKGIIK_09860	0.24	-0.2
2,124,739	-		OKGIIK_09860	0.24	-0.8
2,124,739	-		OKGIIK_09860	0.24	-0.3
2,124,739	-		OKGIIK_09860	0.24	-1.9
2,124,739	-		OKGIIK_09860	0.24	+0.0
2,124,739	-		OKGIIK_09860	0.24	-0.1
2,124,739	-		OKGIIK_09860	0.24	+0.3
2,124,739	-		OKGIIK_09860	0.24	+0.2
2,124,739	-		OKGIIK_09860	0.24	+0.0
2,124,739	-		OKGIIK_09860	0.24	-0.3
2,124,739	-		OKGIIK_09860	0.24	-0.4
2,124,739	-		OKGIIK_09860	0.24	-0.6
2,124,739	-		OKGIIK_09860	0.24	-0.6
2,124,739	-		OKGIIK_09860	0.24	-1.1
2,124,739	-		OKGIIK_09860	0.24	-1.4
2,124,739	-		OKGIIK_09860	0.24	-1.3
2,124,739	-		OKGIIK_09860	0.24	-1.4
2,124,739	-		OKGIIK_09860	0.24	+0.8