Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_06725

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
1,496,540	+		OKGIIK_06720	0.41	+2.4
1,496,540	+		OKGIIK_06720	0.41	+2.1
1,496,540	+		OKGIIK_06720	0.41	-0.2
1,496,540	+		OKGIIK_06720	0.41	+0.6
1,496,540	+		OKGIIK_06720	0.41	+0.1
1,496,540	+		OKGIIK_06720	0.41	-0.8
1,496,540	+		OKGIIK_06720	0.41	+0.9
1,496,540	+		OKGIIK_06720	0.41	+0.3
1,496,540	+		OKGIIK_06720	0.41	+0.1
1,496,540	+		OKGIIK_06720	0.41	-1.6
1,496,540	+		OKGIIK_06720	0.41	+0.6
1,496,540	+		OKGIIK_06720	0.41	-0.0
1,496,540	+		OKGIIK_06720	0.41	-0.5
1,496,540	+		OKGIIK_06720	0.41	+0.1
1,496,540	+		OKGIIK_06720	0.41	+0.3
1,496,540	+		OKGIIK_06720	0.41	+0.3
1,496,540	+		OKGIIK_06720	0.41	+2.4
1,496,540	+		OKGIIK_06720	0.41	-0.2
1,496,540	+		OKGIIK_06720	0.41	+1.8
1,496,540	+		OKGIIK_06720	0.41	-2.1
1,496,540	+		OKGIIK_06720	0.41	-1.3
1,496,541	-		OKGIIK_06720	0.41	+1.1
1,496,541	-		OKGIIK_06720	0.41	+0.7
1,496,541	-		OKGIIK_06720	0.41	+1.1
1,496,541	-		OKGIIK_06720	0.41	+1.3
1,496,541	-		OKGIIK_06720	0.41	-0.4
1,496,541	-		OKGIIK_06720	0.41	+1.9
1,496,541	-		OKGIIK_06720	0.41	-0.1
1,496,541	-		OKGIIK_06720	0.41	-0.5
1,496,541	-		OKGIIK_06720	0.41	-0.5
1,496,541	-		OKGIIK_06720	0.41	-0.2
1,496,541	-		OKGIIK_06720	0.41	+0.9
1,496,541	-		OKGIIK_06720	0.41	+1.1
1,496,541	-		OKGIIK_06720	0.41	-2.2
1,496,541	-		OKGIIK_06720	0.41	-0.2
1,496,541	-		OKGIIK_06720	0.41	-0.1
1,496,541	-		OKGIIK_06720	0.41	+0.6
1,496,541	-		OKGIIK_06720	0.41	+4.3
1,496,541	-		OKGIIK_06720	0.41	+1.6
1,496,541	-		OKGIIK_06720	0.41	+0.6
1,496,541	-		OKGIIK_06720	0.41	-0.9
1,496,541	-		OKGIIK_06720	0.41	-0.9
1,496,541	-		OKGIIK_06720	0.41	+1.4
1,496,553	+		OKGIIK_06720	0.42	+0.1
1,496,553	+		OKGIIK_06720	0.42	+1.5
1,496,553	+		OKGIIK_06720	0.42	-1.1
1,496,553	+		OKGIIK_06720	0.42	-0.2
1,496,553	+		OKGIIK_06720	0.42	+0.3
1,496,553	+		OKGIIK_06720	0.42	-0.9
1,496,553	+		OKGIIK_06720	0.42	+0.9
1,496,553	+		OKGIIK_06720	0.42	+0.9
1,496,553	+		OKGIIK_06720	0.42	+0.1
1,496,553	+		OKGIIK_06720	0.42	+1.1
1,496,553	+		OKGIIK_06720	0.42	-1.9
1,496,553	+		OKGIIK_06720	0.42	+0.1
1,496,553	+		OKGIIK_06720	0.42	+0.5
1,496,553	+		OKGIIK_06720	0.42	+1.3
1,496,554	-		OKGIIK_06720	0.42	+1.9
1,496,554	-		OKGIIK_06720	0.42	+2.7
1,496,554	-		OKGIIK_06720	0.42	-0.7
1,496,554	-		OKGIIK_06720	0.42	+0.5
1,496,554	-		OKGIIK_06720	0.42	+0.1
1,496,554	-		OKGIIK_06720	0.42	+0.7
1,496,554	-		OKGIIK_06720	0.42	-1.0
1,496,554	-		OKGIIK_06720	0.42	+0.9
1,496,554	-		OKGIIK_06720	0.42	-1.9
1,496,554	-		OKGIIK_06720	0.42	-0.5
1,496,554	-		OKGIIK_06720	0.42	+1.3
1,496,554	-		OKGIIK_06720	0.42	+2.1
1,496,554	-		OKGIIK_06720	0.42	+0.5
1,496,554	-		OKGIIK_06720	0.42	-0.5
1,496,554	-		OKGIIK_06720	0.42	-1.3
1,496,554	-		OKGIIK_06720	0.42	+1.3
1,496,554	-		OKGIIK_06720	0.42	-1.5
1,496,554	-		OKGIIK_06720	0.42	+0.1
1,496,626	+		OKGIIK_06720	0.48	-1.9
1,496,626	+		OKGIIK_06720	0.48	+0.3
1,496,626	+		OKGIIK_06720	0.48	+1.1
1,496,626	+		OKGIIK_06720	0.48	+0.1
1,496,626	+		OKGIIK_06720	0.48	+1.1
1,496,626	+		OKGIIK_06720	0.48	+0.4
1,496,626	+		OKGIIK_06720	0.48	+3.1
1,496,627	-		OKGIIK_06720	0.48	+0.5
1,496,627	-		OKGIIK_06720	0.48	+0.8
1,496,627	-		OKGIIK_06720	0.48	-1.5
1,496,627	-		OKGIIK_06720	0.48	+1.1
1,496,627	-		OKGIIK_06720	0.48	-1.2
1,496,627	-		OKGIIK_06720	0.48	+0.1
1,496,627	-		OKGIIK_06720	0.48	-1.1
1,496,627	-		OKGIIK_06720	0.48	-0.6
1,496,627	-		OKGIIK_06720	0.48	+0.1
1,496,627	-		OKGIIK_06720	0.48	+0.5
1,496,627	-		OKGIIK_06720	0.48	-1.0
1,496,627	-		OKGIIK_06720	0.48	+1.4
1,496,627	-		OKGIIK_06720	0.48	-1.9
1,496,627	-		OKGIIK_06720	0.48	-2.2
1,496,627	-		OKGIIK_06720	0.48	-0.5
1,496,627	-		OKGIIK_06720	0.48	+2.7
1,496,627	-		OKGIIK_06720	0.48	+0.1
1,496,627	-		OKGIIK_06720	0.48	-2.4
1,496,627	-		OKGIIK_06720	0.48	-0.7
1,496,778	+		OKGIIK_06720	0.61	+0.2
1,496,778	+		OKGIIK_06720	0.61	-1.5
1,496,778	+		OKGIIK_06720	0.61	+0.7
1,496,778	+		OKGIIK_06720	0.61	-0.9
1,496,778	+		OKGIIK_06720	0.61	-0.3
1,496,778	+		OKGIIK_06720	0.61	-0.2
1,496,778	+		OKGIIK_06720	0.61	-0.1
1,496,778	+		OKGIIK_06720	0.61	-0.7
1,496,778	+		OKGIIK_06720	0.61	-0.9
1,496,778	+		OKGIIK_06720	0.61	+0.8
1,496,778	+		OKGIIK_06720	0.61	-0.1
1,496,779	-		OKGIIK_06720	0.61	-0.7
1,496,779	-		OKGIIK_06720	0.61	+1.3
1,496,779	-		OKGIIK_06720	0.61	-1.4
1,496,779	-		OKGIIK_06720	0.61	+1.9
1,496,779	-		OKGIIK_06720	0.61	+1.6
1,496,779	-		OKGIIK_06720	0.61	-1.2
1,496,779	-		OKGIIK_06720	0.61	+0.2
1,496,779	-		OKGIIK_06720	0.61	+0.2
1,496,779	-		OKGIIK_06720	0.61	-1.8
1,496,779	-		OKGIIK_06720	0.61	-0.9
1,496,779	-		OKGIIK_06720	0.61	-0.9
1,496,779	-		OKGIIK_06720	0.61	+3.7
1,496,779	-		OKGIIK_06720	0.61	-0.4
1,496,779	-		OKGIIK_06720	0.61	+0.2
1,496,779	-		OKGIIK_06720	0.61	+1.7
1,496,779	-		OKGIIK_06720	0.61	+0.4
1,496,790	+		OKGIIK_06720	0.62	-1.7
1,496,790	+		OKGIIK_06720	0.62	+1.5
1,496,790	+		OKGIIK_06720	0.62	+1.5
1,496,790	+		OKGIIK_06720	0.62	+1.1
1,496,790	+		OKGIIK_06720	0.62	-0.4
1,496,790	+		OKGIIK_06720	0.62	-2.4
1,496,790	+		OKGIIK_06720	0.62	+0.3
1,496,790	+		OKGIIK_06720	0.62	+0.1
1,496,790	+		OKGIIK_06720	0.62	-0.2
1,496,790	+		OKGIIK_06720	0.62	-2.5
1,496,790	+		OKGIIK_06720	0.62	+2.1
1,496,790	+		OKGIIK_06720	0.62	+1.4
1,496,791	-		OKGIIK_06720	0.62	+0.5
1,496,791	-		OKGIIK_06720	0.62	-1.7
1,496,791	-		OKGIIK_06720	0.62	-0.1
1,496,791	-		OKGIIK_06720	0.62	-0.9
1,496,791	-		OKGIIK_06720	0.62	+0.5
1,496,791	-		OKGIIK_06720	0.62	-0.5
1,496,791	-		OKGIIK_06720	0.62	-0.2
1,496,791	-		OKGIIK_06720	0.62	+0.1
1,496,791	-		OKGIIK_06720	0.62	-1.9
1,496,791	-		OKGIIK_06720	0.62	+0.6
1,496,791	-		OKGIIK_06720	0.62	+0.7
1,496,791	-		OKGIIK_06720	0.62	-0.1
1,496,791	-		OKGIIK_06720	0.62	+0.1
1,496,791	-		OKGIIK_06720	0.62	+0.5
1,496,791	-		OKGIIK_06720	0.62	-0.1
1,496,791	-		OKGIIK_06720	0.62	-1.1
1,496,791	-		OKGIIK_06720	0.62	+0.5
1,497,049	+		OKGIIK_06720	0.83	+0.7
1,497,049	+		OKGIIK_06720	0.83	+0.1
1,497,050	-		OKGIIK_06720	0.83	+1.0
1,497,050	-		OKGIIK_06720	0.83	-0.7
1,497,050	-		OKGIIK_06720	0.83	-1.5
1,497,050	-		OKGIIK_06720	0.83	+0.6
1,497,050	-		OKGIIK_06720	0.83	-0.3
1,497,050	-		OKGIIK_06720	0.83	+1.1
1,497,143	+				+0.1
1,497,143	+				+1.0
1,497,143	+				+0.1
1,497,143	+				-2.1
1,497,143	+				+0.1
1,497,143	+				+0.1
1,497,143	+				+0.1
1,497,143	+				-1.9
1,497,143	+				+0.3
1,497,143	+				+1.6
1,497,143	+				+0.5
1,497,143	+				+0.3
1,497,143	+				+1.2
1,497,143	+				-0.9
1,497,143	+				-1.5
1,497,143	+				+1.1
1,497,143	+				-0.9
1,497,143	+				-0.1
1,497,143	+				-1.0
1,497,143	+				-1.2
1,497,143	+				+0.1
1,497,143	+				+0.8
1,497,144	-				+1.1
1,497,144	-				+1.1
1,497,144	-				-2.2
1,497,144	-				-0.3
1,497,144	-				-0.0
1,497,144	-				+2.7
1,497,144	-				-1.0
1,497,144	-				-0.7
1,497,144	-				-1.3
1,497,144	-				+0.9
1,497,144	-				-0.2
1,497,144	-				-0.5
1,497,144	-				+0.1
1,497,144	-				-0.5
1,497,144	-				-1.7
1,497,144	-				-0.7
1,497,144	-				-0.4
1,497,144	-				+0.0
1,497,144	-				+0.2
1,497,144	-				-0.7
1,497,144	-				+1.1
1,497,144	-				-0.8
1,497,245	+				+0.5
1,497,245	+				+0.1
1,497,246	-				-0.5
1,497,296	+				+0.3
1,497,296	+				+1.0
1,497,296	+				+0.4
1,497,296	+				+0.9
1,497,296	+				-1.5
1,497,296	+				+0.9
1,497,296	+				-1.9
1,497,296	+				+0.2
1,497,296	+				+0.4
1,497,296	+				-1.5
1,497,296	+				-0.5
1,497,296	+				+0.1
1,497,296	+				-0.1
1,497,296	+				-0.7
1,497,296	+				+0.6
1,497,296	-				-0.7
1,497,297	-				-0.6
1,497,297	-				+0.4
1,497,297	-				+0.3
1,497,297	-				+0.2
1,497,297	-				-0.1
1,497,297	-				-1.8
1,497,297	-				-1.6
1,497,297	-				+1.7
1,497,297	-				-0.7
1,497,297	-				-0.2
1,497,297	-				+0.1
1,497,297	-				-0.5
1,497,297	-				-0.2
1,497,297	-				-1.7
1,497,297	-				-0.1
1,497,297	-				+1.4
1,497,297	-				-1.0
1,497,297	-				+0.1
1,497,297	-				+0.1
1,497,297	-				+1.3
1,497,297	-				-0.5
1,497,301	+				-1.4
1,497,301	+				-1.7
1,497,301	+				+3.5
1,497,301	+				+0.8
1,497,301	+				+0.6
1,497,301	+				-1.0
1,497,301	+				+0.8
1,497,301	+				+0.5
1,497,301	+				-0.6
1,497,301	+				+1.3
1,497,301	+				-0.7
1,497,301	+				+1.7
1,497,301	+				-0.7
1,497,301	+				+1.3
1,497,301	+				+1.1
1,497,302	-				-2.6
1,497,302	-				-0.3
1,497,302	-				+0.7
1,497,302	-				+1.4
1,497,302	-				+0.3
1,497,302	-				+1.1
1,497,302	-				+0.6
1,497,302	-				+1.3
1,497,302	-				+1.5
1,497,302	-				-0.5
1,497,302	-				+0.3
1,497,302	-				+0.8
1,497,302	-				+0.3
1,497,302	-				-0.2
1,497,302	-				+1.9
1,497,302	-				+0.5
1,497,302	-				+0.1
1,497,302	-				+0.4
1,497,302	-				-0.9
1,497,302	-				+0.2
1,497,302	-				+0.7
1,497,302	-				-0.3
1,497,302	-				+1.8
1,497,302	-				+0.8
1,497,302	-				-0.7
1,497,302	-				+2.1
1,497,302	-				-0.4
1,497,302	-				-0.7
1,497,312	+				-1.5
1,497,312	+				-1.9
1,497,312	+				+0.7
1,497,313	-				+1.1
1,497,313	-				-1.7
1,497,367	+				+1.7
1,497,367	+				-0.3
1,497,367	+				+1.1
1,497,367	+				+0.2
1,497,367	+				-1.2
1,497,367	+				+0.2
1,497,367	+				+0.3
1,497,367	+				-0.9
1,497,367	+				-1.2
1,497,367	+				-0.3
1,497,367	+				-1.6
1,497,367	+				+0.2
1,497,367	+				+1.0
1,497,367	+				+0.7
1,497,367	+				-0.9
1,497,368	-				-0.5
1,497,368	-				+1.7
1,497,368	-				-0.1
1,497,368	-				-1.9
1,497,368	-				-0.2
1,497,368	-				-0.2
1,497,368	-				+0.5
1,497,368	-				+0.3
1,497,368	-				+0.7
1,497,368	-				-2.2
1,497,368	-				-0.4
1,497,368	-				+0.1
1,497,368	-				+1.1
1,497,368	-				+0.1
1,497,368	-				-0.9
1,497,368	-				-2.6
1,497,368	-				-0.4
1,497,368	-				-0.1
1,497,368	-				-1.7
1,497,368	-				+0.5
1,497,368	-				+0.7
1,497,368	-				+0.0
1,497,368	-				+1.1
1,497,368	-				+1.1
1,497,368	-				+0.1
1,497,368	-				+0.1
1,497,368	-				+1.1
1,497,368	-				-0.2
1,497,368	-				-0.4
1,497,770	+	rpoE	OKGIIK_06725	0.79	+1.1
1,497,770	+	rpoE	OKGIIK_06725	0.79	+0.5
1,497,770	+	rpoE	OKGIIK_06725	0.79	+0.3
1,497,771	-	rpoE	OKGIIK_06725	0.79	+0.6
1,497,771	-	rpoE	OKGIIK_06725	0.79	+0.2
1,497,771	-	rpoE	OKGIIK_06725	0.79	+0.3
1,497,904	+				-1.2
1,497,904	+				-1.4
1,497,904	+				+0.5
1,497,904	+				+1.2
1,497,904	+				-1.5
1,497,904	+				+0.1
1,497,904	+				-1.2
1,497,904	+				+0.7
1,497,904	+				+0.6
1,497,904	+				+0.2
1,497,904	+				-1.2
1,497,904	+				+1.1
1,497,904	+				+0.7
1,497,904	+				+1.9
1,497,904	+				-1.9
1,497,905	-				-1.4
1,497,905	-				+1.2
1,497,905	-				-1.6
1,497,905	-				+0.1
1,497,905	-				-0.7
1,497,905	-				+0.1
1,497,905	-				-1.4
1,497,905	-				+1.6
1,497,905	-				-0.1
1,497,905	-				-1.0
1,497,905	-				-0.6
1,497,905	-				+1.2
1,497,905	-				-0.1
1,497,905	-				+0.4
1,497,905	-				-0.5
1,497,905	-				+0.9
1,497,905	-				-0.9
1,497,905	-				+1.1
1,497,905	-				-1.4
1,497,905	-				-0.2
1,497,905	-				-0.9
1,498,627	+				+0.5
1,498,627	+				-1.9
1,498,777	+				-0.3
1,498,777	+				-2.7
1,498,777	+				-0.6
1,498,777	+				-1.5
1,498,777	+				-0.8
1,498,777	+				-1.2
1,498,777	+				-1.9
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1,498,848	-		OKGIIK_06735	0.10	-0.7