Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05060

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
1,095,129	+				-1.5
1,095,129	+				-0.9
1,095,129	+				+0.6
1,095,129	+				-0.1
1,095,129	+				-0.7
1,095,130	-				+0.4
1,095,130	-				-0.7
1,095,189	+		OKGIIK_05055	0.14	-1.0
1,095,189	+		OKGIIK_05055	0.14	-0.3
1,095,189	+		OKGIIK_05055	0.14	-0.2
1,095,189	+		OKGIIK_05055	0.14	-1.1
1,095,189	+		OKGIIK_05055	0.14	+0.7
1,095,189	+		OKGIIK_05055	0.14	+1.7
1,095,189	+		OKGIIK_05055	0.14	+0.0
1,095,189	+		OKGIIK_05055	0.14	+0.3
1,095,190	-		OKGIIK_05055	0.14	-0.2
1,095,190	-		OKGIIK_05055	0.14	+0.7
1,095,190	-		OKGIIK_05055	0.14	-0.1
1,095,190	-		OKGIIK_05055	0.14	+1.7
1,095,190	-		OKGIIK_05055	0.14	+1.1
1,095,190	-		OKGIIK_05055	0.14	+0.0
1,095,190	-		OKGIIK_05055	0.14	+0.3
1,095,190	-		OKGIIK_05055	0.14	+0.7
1,095,190	-		OKGIIK_05055	0.14	+0.9
1,095,216	+		OKGIIK_05055	0.18	+0.2
1,095,216	+		OKGIIK_05055	0.18	-0.8
1,095,216	+		OKGIIK_05055	0.18	-1.0
1,095,216	+		OKGIIK_05055	0.18	+0.1
1,095,216	+		OKGIIK_05055	0.18	-0.7
1,095,216	+		OKGIIK_05055	0.18	-0.5
1,095,216	+		OKGIIK_05055	0.18	+0.2
1,095,216	+		OKGIIK_05055	0.18	+0.5
1,095,228	+		OKGIIK_05055	0.20	-1.0
1,095,229	-		OKGIIK_05055	0.20	+1.3
1,095,229	-		OKGIIK_05055	0.20	+0.1
1,095,229	-		OKGIIK_05055	0.20	-0.3
1,095,229	-		OKGIIK_05055	0.20	-0.0
1,095,229	-		OKGIIK_05055	0.20	-0.2
1,095,316	+		OKGIIK_05055	0.32	-0.4
1,095,316	+		OKGIIK_05055	0.32	-1.8
1,095,316	+		OKGIIK_05055	0.32	+1.6
1,095,316	+		OKGIIK_05055	0.32	-0.1
1,095,317	-		OKGIIK_05055	0.32	-0.5
1,095,318	+		OKGIIK_05055	0.32	-0.2
1,095,318	+		OKGIIK_05055	0.32	-0.1
1,095,318	+		OKGIIK_05055	0.32	+0.7
1,095,318	+		OKGIIK_05055	0.32	-0.5
1,095,318	+		OKGIIK_05055	0.32	+0.8
1,095,318	+		OKGIIK_05055	0.32	-0.5
1,095,319	-		OKGIIK_05055	0.33	+0.2
1,095,319	-		OKGIIK_05055	0.33	-0.8
1,095,355	-		OKGIIK_05055	0.38	-1.8
1,095,355	-		OKGIIK_05055	0.38	+0.0
1,095,355	-		OKGIIK_05055	0.38	+0.3
1,095,456	+		OKGIIK_05055	0.52	+0.0
1,095,456	+		OKGIIK_05055	0.52	-0.6
1,095,456	+		OKGIIK_05055	0.52	-0.7
1,095,456	+		OKGIIK_05055	0.52	+0.1
1,095,456	+		OKGIIK_05055	0.52	-1.0
1,095,457	-		OKGIIK_05055	0.52	+1.0
1,095,457	-		OKGIIK_05055	0.52	+1.7
1,095,477	+		OKGIIK_05055	0.55	+0.0
1,095,477	+		OKGIIK_05055	0.55	+1.2
1,095,477	+		OKGIIK_05055	0.55	-0.2
1,095,478	-		OKGIIK_05055	0.55	-1.4
1,095,478	-		OKGIIK_05055	0.55	-0.0
1,095,532	-		OKGIIK_05055	0.63	+0.2
1,095,830	+				+0.5
1,095,830	+				-0.5
1,095,831	-				+0.4
1,095,862	+				+0.0
1,095,868	+				-1.8
1,095,868	+				+0.6
1,095,951	+				+0.0
1,095,952	-				-0.8
1,095,952	-				-1.4
1,096,446	+		OKGIIK_05060	0.64	+0.2
1,096,447	-		OKGIIK_05060	0.64	+0.8
1,096,447	-		OKGIIK_05060	0.64	-0.5
1,096,476	+		OKGIIK_05060	0.68	-0.1
1,096,482	+		OKGIIK_05060	0.68	-1.8
1,096,482	+		OKGIIK_05060	0.68	+0.6
1,096,482	+		OKGIIK_05060	0.68	-0.1
1,096,482	+		OKGIIK_05060	0.68	+0.0
1,096,482	+		OKGIIK_05060	0.68	+0.6
1,096,482	+		OKGIIK_05060	0.68	-0.7
1,096,482	+		OKGIIK_05060	0.68	-0.3
1,096,483	-		OKGIIK_05060	0.69	-1.8
1,096,483	-		OKGIIK_05060	0.69	+0.7
1,096,483	-		OKGIIK_05060	0.69	+0.5
1,096,483	-		OKGIIK_05060	0.69	+1.5
1,096,483	-		OKGIIK_05060	0.69	-1.0
1,096,483	-		OKGIIK_05060	0.69	-0.3
1,096,483	-		OKGIIK_05060	0.69	-0.5
1,096,483	-		OKGIIK_05060	0.69	+1.4
1,096,483	-		OKGIIK_05060	0.69	+0.0
1,096,500	+		OKGIIK_05060	0.71	+1.4
1,096,500	+		OKGIIK_05060	0.71	+0.0
1,096,500	+		OKGIIK_05060	0.71	-0.1
1,096,500	+		OKGIIK_05060	0.71	-1.5
1,096,500	+		OKGIIK_05060	0.71	-0.1
1,096,500	+		OKGIIK_05060	0.71	-1.1
1,096,500	+		OKGIIK_05060	0.71	+0.8
1,096,500	+		OKGIIK_05060	0.71	-1.0
1,096,500	+		OKGIIK_05060	0.71	+0.0
1,096,500	+		OKGIIK_05060	0.71	-0.4
1,096,501	-		OKGIIK_05060	0.71	+1.3
1,096,501	-		OKGIIK_05060	0.71	-0.0
1,096,501	-		OKGIIK_05060	0.71	-1.0
1,096,501	-		OKGIIK_05060	0.71	+0.0
1,096,501	-		OKGIIK_05060	0.71	-1.0
1,096,501	-		OKGIIK_05060	0.71	-0.5
1,096,501	-		OKGIIK_05060	0.71	-1.5
1,096,501	-		OKGIIK_05060	0.71	-0.7
1,096,501	-		OKGIIK_05060	0.71	-0.8
1,096,501	-		OKGIIK_05060	0.71	-1.5
1,096,501	-		OKGIIK_05060	0.71	+0.6
1,096,501	-		OKGIIK_05060	0.71	-0.7
1,096,501	-		OKGIIK_05060	0.71	-0.8
1,096,593	+		OKGIIK_05060	0.82	+0.7
1,096,593	+		OKGIIK_05060	0.82	+0.1
1,096,593	+		OKGIIK_05060	0.82	-0.1
1,096,593	+		OKGIIK_05060	0.82	+0.2
1,096,593	+		OKGIIK_05060	0.82	+1.9
1,096,593	+		OKGIIK_05060	0.82	-0.6
1,096,593	+		OKGIIK_05060	0.82	-0.2
1,096,594	-		OKGIIK_05060	0.82	-0.5
1,096,594	-		OKGIIK_05060	0.82	+1.4
1,096,594	-		OKGIIK_05060	0.82	-0.8
1,096,594	-		OKGIIK_05060	0.82	+0.0
1,096,594	-		OKGIIK_05060	0.82	+0.6
1,096,630	-		OKGIIK_05060	0.87	-2.0
1,096,630	-		OKGIIK_05060	0.87	-0.3
1,096,633	+		OKGIIK_05060	0.87	+0.8
1,096,633	+		OKGIIK_05060	0.87	-1.2
1,096,633	+		OKGIIK_05060	0.87	-0.4
1,096,633	+		OKGIIK_05060	0.87	-0.1
1,096,634	-		OKGIIK_05060	0.87	-0.0
1,096,634	-		OKGIIK_05060	0.87	-1.2
1,096,760	-				+0.0
1,096,760	-				+0.5
1,096,760	-				+0.4
1,096,760	-				+0.5
1,096,864	+				-0.0
1,097,074	+	ybcJ	OKGIIK_05065	0.86	+0.2
1,097,075	-	ybcJ	OKGIIK_05065	0.86	+0.3
1,097,075	-	ybcJ	OKGIIK_05065	0.86	+0.6
1,097,247	+		OKGIIK_05070	0.27	+0.2
1,097,247	+		OKGIIK_05070	0.27	-0.1
1,097,247	+		OKGIIK_05070	0.27	+1.6
1,097,247	+		OKGIIK_05070	0.27	-1.9
1,097,247	+		OKGIIK_05070	0.27	+0.6
1,097,247	+		OKGIIK_05070	0.27	-0.4
1,097,247	+		OKGIIK_05070	0.27	-1.0
1,097,248	-		OKGIIK_05070	0.27	+0.0
1,097,248	-		OKGIIK_05070	0.27	+0.5
1,097,248	-		OKGIIK_05070	0.27	+0.6
1,097,248	-		OKGIIK_05070	0.27	-2.5
1,097,248	-		OKGIIK_05070	0.27	-1.5
1,097,248	-		OKGIIK_05070	0.27	+0.0
1,097,248	-		OKGIIK_05070	0.27	-0.9
1,097,301	+		OKGIIK_05070	0.39	-0.3
1,097,301	+		OKGIIK_05070	0.39	-0.5
1,097,302	-		OKGIIK_05070	0.39	-0.2
1,097,302	-		OKGIIK_05070	0.39	-0.3
1,097,366	+		OKGIIK_05070	0.54	+0.8
1,097,514	+		OKGIIK_05070	0.87	+0.6
1,097,514	+		OKGIIK_05070	0.87	-0.4
1,097,514	+		OKGIIK_05070	0.87	+1.4
1,097,514	+		OKGIIK_05070	0.87	-1.0
1,097,514	+		OKGIIK_05070	0.87	+1.7
1,097,514	+		OKGIIK_05070	0.87	-1.2
1,097,514	+		OKGIIK_05070	0.87	-0.2
1,097,514	+		OKGIIK_05070	0.87	-1.4
1,097,514	+		OKGIIK_05070	0.87	+0.6
1,097,515	-		OKGIIK_05070	0.88	-0.5
1,097,515	-		OKGIIK_05070	0.88	-0.5
1,097,515	-		OKGIIK_05070	0.88	+0.0
1,097,515	-		OKGIIK_05070	0.88	-0.7
1,097,515	-		OKGIIK_05070	0.88	-1.3
1,097,515	-		OKGIIK_05070	0.88	-1.3
1,097,515	-		OKGIIK_05070	0.88	+0.1
1,097,515	-		OKGIIK_05070	0.88	+1.0
1,097,615	+		OKGIIK_05075	0.12	+0.1
1,097,615	+		OKGIIK_05075	0.12	+0.0
1,097,615	+		OKGIIK_05075	0.12	-1.9
1,097,615	+		OKGIIK_05075	0.12	-1.2
1,097,615	+		OKGIIK_05075	0.12	+0.1
1,097,615	+		OKGIIK_05075	0.12	-1.0
1,097,615	+		OKGIIK_05075	0.12	-1.8
1,097,615	+		OKGIIK_05075	0.12	-0.2
1,097,616	-		OKGIIK_05075	0.12	+0.3
1,097,616	-		OKGIIK_05075	0.12	+0.4
1,097,618	+		OKGIIK_05075	0.13	-0.4
1,097,618	+		OKGIIK_05075	0.13	-1.0
1,097,618	+		OKGIIK_05075	0.13	+0.3
1,097,618	+		OKGIIK_05075	0.13	+0.7
1,097,618	+		OKGIIK_05075	0.13	+0.2
1,097,618	+		OKGIIK_05075	0.13	-1.2
1,097,618	+		OKGIIK_05075	0.13	-0.6
1,097,619	-		OKGIIK_05075	0.13	-0.3
1,097,619	-		OKGIIK_05075	0.13	-0.0
1,097,619	-		OKGIIK_05075	0.13	+1.0
1,097,619	-		OKGIIK_05075	0.13	-0.7
1,097,696	+		OKGIIK_05075	0.31	-0.4
1,097,696	+		OKGIIK_05075	0.31	+0.5
1,097,696	+		OKGIIK_05075	0.31	+0.3
1,097,696	+		OKGIIK_05075	0.31	+0.5
1,097,697	-		OKGIIK_05075	0.32	+0.5
1,097,697	-		OKGIIK_05075	0.32	-4.0
1,097,705	+		OKGIIK_05075	0.34	-2.1
1,097,705	+		OKGIIK_05075	0.34	-1.5
1,097,705	+		OKGIIK_05075	0.34	-0.9
1,097,705	+		OKGIIK_05075	0.34	+0.5
1,097,706	-		OKGIIK_05075	0.34	-0.3
1,097,706	-		OKGIIK_05075	0.34	-0.2
1,097,708	+		OKGIIK_05075	0.34	-1.7
1,097,708	+		OKGIIK_05075	0.34	+0.4
1,097,708	+		OKGIIK_05075	0.34	+1.6
1,097,708	+		OKGIIK_05075	0.34	-1.0