Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06930 and MPMX19_06931 are separated by 14 nucleotides MPMX19_06931 and MPMX19_06932 are separated by 548 nucleotides MPMX19_06932 and MPMX19_06933 are separated by 137 nucleotides MPMX19_06933 and MPMX19_06934 overlap by 4 nucleotides
MPMX19_06930: MPMX19_06930 - Sensor kinase CckA, at 203,963 to 204,331
_06930
MPMX19_06931: MPMX19_06931 - hypothetical protein, at 204,346 to 204,669
_06931
MPMX19_06932: MPMX19_06932 - hypothetical protein, at 205,218 to 205,895
_06932
MPMX19_06933: MPMX19_06933 - Manganese transport system ATP-binding protein MntB, at 206,033 to 206,803
_06933
MPMX19_06934: MPMX19_06934 - Manganese transport system membrane protein MntB, at 206,800 to 207,684
_06934
Position (kb) 205
206 Strain fitness (log2 ratio) -2
-1
0
1
2 at 204.405 kb on - strand, within MPMX19_06931 at 204.847 kb on + strand at 204.847 kb on + strand at 204.848 kb on - strand at 204.971 kb on - strand at 205.319 kb on - strand, within MPMX19_06932 at 205.344 kb on - strand, within MPMX19_06932 at 205.344 kb on - strand, within MPMX19_06932 at 205.344 kb on - strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.536 kb on + strand, within MPMX19_06932 at 205.537 kb on - strand, within MPMX19_06932 at 205.537 kb on - strand, within MPMX19_06932 at 205.537 kb on - strand, within MPMX19_06932 at 205.537 kb on - strand, within MPMX19_06932 at 205.647 kb on + strand, within MPMX19_06932 at 205.647 kb on + strand, within MPMX19_06932 at 205.647 kb on + strand, within MPMX19_06932 at 205.890 kb on + strand at 205.890 kb on + strand at 205.890 kb on + strand at 206.276 kb on + strand, within MPMX19_06933 at 206.276 kb on + strand, within MPMX19_06933 at 206.277 kb on - strand, within MPMX19_06933 at 206.277 kb on - strand, within MPMX19_06933 at 206.277 kb on - strand, within MPMX19_06933 at 206.809 kb on + strand at 206.809 kb on + strand at 206.810 kb on - strand at 206.810 kb on - strand at 206.810 kb on - strand at 206.810 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 204,405 - MPMX19_06931 0.18 -1.6 204,847 + +1.5 204,847 + -0.6 204,848 - +1.1 204,971 - -0.3 205,319 - MPMX19_06932 0.15 -0.5 205,344 - MPMX19_06932 0.19 +0.1 205,344 - MPMX19_06932 0.19 -0.9 205,344 - MPMX19_06932 0.19 -0.8 205,536 + MPMX19_06932 0.47 -0.7 205,536 + MPMX19_06932 0.47 -0.2 205,536 + MPMX19_06932 0.47 -1.0 205,536 + MPMX19_06932 0.47 +0.5 205,536 + MPMX19_06932 0.47 -1.0 205,536 + MPMX19_06932 0.47 -0.1 205,537 - MPMX19_06932 0.47 -0.2 205,537 - MPMX19_06932 0.47 +0.6 205,537 - MPMX19_06932 0.47 +2.1 205,537 - MPMX19_06932 0.47 -1.1 205,647 + MPMX19_06932 0.63 +0.1 205,647 + MPMX19_06932 0.63 -0.1 205,647 + MPMX19_06932 0.63 -1.9 205,890 + +1.1 205,890 + +1.5 205,890 + +0.1 206,276 + MPMX19_06933 0.32 -0.1 206,276 + MPMX19_06933 0.32 -1.6 206,277 - MPMX19_06933 0.32 -1.7 206,277 - MPMX19_06933 0.32 -0.1 206,277 - MPMX19_06933 0.32 -0.1 206,809 + +0.1 206,809 + -0.6 206,810 - -0.2 206,810 - +0.5 206,810 - -1.1 206,810 - -0.3
Or see this region's nucleotide sequence