Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06840

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
105,297	+		MPMX19_06839	0.48	+0.9
105,298	-		MPMX19_06839	0.48	+0.1
105,397	+		MPMX19_06839	0.54	-0.1
105,397	+		MPMX19_06839	0.54	+0.1
105,398	-		MPMX19_06839	0.54	-0.0
105,398	-		MPMX19_06839	0.54	-0.7
105,398	-		MPMX19_06839	0.54	+0.7
105,517	+		MPMX19_06839	0.62	-0.0
105,517	+		MPMX19_06839	0.62	-0.7
105,517	+		MPMX19_06839	0.62	-1.2
105,517	+		MPMX19_06839	0.62	-0.7
105,517	+		MPMX19_06839	0.62	-0.8
105,517	+		MPMX19_06839	0.62	-0.1
105,517	+		MPMX19_06839	0.62	-0.3
105,517	+		MPMX19_06839	0.62	-0.6
105,517	+		MPMX19_06839	0.62	-0.5
105,517	+		MPMX19_06839	0.62	-1.3
105,518	-		MPMX19_06839	0.62	-1.0
105,518	-		MPMX19_06839	0.62	-0.4
105,518	-		MPMX19_06839	0.62	-0.2
105,518	-		MPMX19_06839	0.62	-1.0
105,518	-		MPMX19_06839	0.62	-0.8
105,518	-		MPMX19_06839	0.62	+1.6
105,518	-		MPMX19_06839	0.62	+0.5
105,518	-		MPMX19_06839	0.62	+0.5
105,518	-		MPMX19_06839	0.62	-1.6
105,865	+		MPMX19_06839	0.83	-0.8
105,865	+		MPMX19_06839	0.83	+0.5
105,865	+		MPMX19_06839	0.83	-2.9
105,865	+		MPMX19_06839	0.83	-1.2
105,865	+		MPMX19_06839	0.83	-0.3
105,865	+		MPMX19_06839	0.83	-0.7
105,865	+		MPMX19_06839	0.83	-0.7
105,865	+		MPMX19_06839	0.83	-1.1
105,866	-		MPMX19_06839	0.83	-0.5
105,866	-		MPMX19_06839	0.83	-0.2
105,866	-		MPMX19_06839	0.83	-0.0
106,309	-		MPMX19_06840	0.18	-1.2
106,309	-		MPMX19_06840	0.18	+0.1
106,437	+		MPMX19_06840	0.32	-0.2
106,437	+		MPMX19_06840	0.32	-0.2
106,438	-		MPMX19_06840	0.33	-0.2
106,438	-		MPMX19_06840	0.33	+0.9
106,536	+		MPMX19_06840	0.44	-0.7
106,536	+		MPMX19_06840	0.44	-1.4
106,536	+		MPMX19_06840	0.44	-1.1
106,536	+		MPMX19_06840	0.44	-2.5
106,536	+		MPMX19_06840	0.44	+0.3
106,536	+		MPMX19_06840	0.44	-1.3
106,536	+		MPMX19_06840	0.44	+0.6
106,536	+		MPMX19_06840	0.44	+0.1
106,536	+		MPMX19_06840	0.44	+0.5
106,536	+		MPMX19_06840	0.44	+0.3
106,536	+		MPMX19_06840	0.44	+0.3
106,536	+		MPMX19_06840	0.44	-0.9
106,537	-		MPMX19_06840	0.44	-0.9
106,537	-		MPMX19_06840	0.44	-1.4
106,537	-		MPMX19_06840	0.44	-0.2
106,537	-		MPMX19_06840	0.44	-0.1
106,537	-		MPMX19_06840	0.44	-1.8
106,537	-		MPMX19_06840	0.44	+1.7
106,537	-		MPMX19_06840	0.44	-2.4
106,537	-		MPMX19_06840	0.44	-0.7
106,537	-		MPMX19_06840	0.44	-1.2
106,537	-		MPMX19_06840	0.44	-1.8
106,537	-		MPMX19_06840	0.44	+0.1
106,537	-		MPMX19_06840	0.44	-0.0
106,537	-		MPMX19_06840	0.44	+0.1
106,537	-		MPMX19_06840	0.44	-0.3
106,537	-		MPMX19_06840	0.44	-0.9
106,537	-		MPMX19_06840	0.44	+0.2
106,537	-		MPMX19_06840	0.44	-0.6
106,537	-		MPMX19_06840	0.44	-1.4
106,537	-		MPMX19_06840	0.44	-1.6
106,537	-		MPMX19_06840	0.44	-1.2
106,537	-		MPMX19_06840	0.44	-0.4
106,537	-		MPMX19_06840	0.44	-0.6
106,537	-		MPMX19_06840	0.44	-0.1
106,537	-		MPMX19_06840	0.44	-3.0
106,537	-		MPMX19_06840	0.44	-0.3
106,537	-		MPMX19_06840	0.44	-1.5
106,537	-		MPMX19_06840	0.44	-0.0
106,537	-		MPMX19_06840	0.44	+0.2
106,537	-		MPMX19_06840	0.44	+0.8
106,537	-		MPMX19_06840	0.44	+0.9
106,537	-		MPMX19_06840	0.44	-0.3
106,752	+		MPMX19_06840	0.68	-0.7
106,764	+		MPMX19_06840	0.69	-0.7
106,764	+		MPMX19_06840	0.69	+0.2
106,764	+		MPMX19_06840	0.69	+0.1
106,764	+		MPMX19_06840	0.69	-0.5
106,765	-		MPMX19_06840	0.69	-1.4
106,765	-		MPMX19_06840	0.69	+0.1
106,765	-		MPMX19_06840	0.69	-0.6
106,797	+		MPMX19_06840	0.73	-0.3
106,797	+		MPMX19_06840	0.73	-1.7
106,797	+		MPMX19_06840	0.73	-1.5
106,881	+		MPMX19_06840	0.82	-0.1
106,881	+		MPMX19_06840	0.82	-0.2
106,881	+		MPMX19_06840	0.82	-1.8
106,882	-		MPMX19_06840	0.82	-1.1
106,956	+				-0.6
107,096	+				+0.8
107,187	-		MPMX19_06841	0.16	-0.4
107,229	-		MPMX19_06841	0.20	-1.5
107,229	-		MPMX19_06841	0.20	-0.4
107,229	-		MPMX19_06841	0.20	-0.7
107,339	+		MPMX19_06841	0.32	-1.4
107,340	-		MPMX19_06841	0.32	-0.3
107,340	-		MPMX19_06841	0.32	-0.4
107,340	-		MPMX19_06841	0.32	-0.7
107,340	-		MPMX19_06841	0.32	-1.7
107,340	-		MPMX19_06841	0.32	-0.2
107,340	-		MPMX19_06841	0.32	-0.7
107,432	+		MPMX19_06841	0.42	-0.9
107,468	+		MPMX19_06841	0.46	-1.0
107,468	+		MPMX19_06841	0.46	-1.7
107,468	+		MPMX19_06841	0.46	+2.1
107,468	+		MPMX19_06841	0.46	-1.2
107,468	+		MPMX19_06841	0.46	-1.0
107,468	+		MPMX19_06841	0.46	+0.1
107,468	+		MPMX19_06841	0.46	-0.5
107,469	-		MPMX19_06841	0.46	-2.0
107,469	-		MPMX19_06841	0.46	-0.9
107,469	-		MPMX19_06841	0.46	-1.5
107,469	-		MPMX19_06841	0.46	+0.8
107,469	-		MPMX19_06841	0.46	-0.6
107,469	-		MPMX19_06841	0.46	-3.2
107,469	-		MPMX19_06841	0.46	+0.1
107,501	+		MPMX19_06841	0.49	-0.2
107,591	+		MPMX19_06841	0.58	+0.5
107,592	-		MPMX19_06841	0.59	-0.1
107,721	+		MPMX19_06841	0.72	-0.9
107,721	+		MPMX19_06841	0.72	+0.2
107,721	+		MPMX19_06841	0.72	-1.3
107,721	+		MPMX19_06841	0.72	-0.8
107,721	+		MPMX19_06841	0.72	-0.5
107,721	+		MPMX19_06841	0.72	+0.3
107,721	+		MPMX19_06841	0.72	-0.2
107,721	+		MPMX19_06841	0.72	-0.5
107,722	-		MPMX19_06841	0.72	+0.0
107,722	-		MPMX19_06841	0.72	-0.5
107,722	-		MPMX19_06841	0.72	-0.3
107,722	-		MPMX19_06841	0.72	-0.1
107,732	+		MPMX19_06841	0.73	-0.1
107,732	+		MPMX19_06841	0.73	-1.1
107,732	+		MPMX19_06841	0.73	-1.1
107,733	-		MPMX19_06841	0.73	-0.5
107,775	-		MPMX19_06841	0.78	-0.1
107,917	+				-0.2
107,917	+				-0.7
107,918	-				-1.6