Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06763 and MPMX19_06764 are separated by 124 nucleotides MPMX19_06764 and MPMX19_06765 are separated by 41 nucleotides MPMX19_06765 and MPMX19_06766 are separated by 222 nucleotides
MPMX19_06763: MPMX19_06763 - hypothetical protein, at 29,342 to 30,259
_06763
MPMX19_06764: MPMX19_06764 - hypothetical protein, at 30,384 to 31,058
_06764
MPMX19_06765: MPMX19_06765 - Hydrogen peroxide-inducible genes activator, at 31,100 to 32,032
_06765
MPMX19_06766: MPMX19_06766 - Bicarbonate transport ATP-binding protein CmpC, at 32,255 to 33,187
_06766
Position (kb) 31
32
33 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 30.305 kb on + strand at 30.585 kb on + strand, within MPMX19_06764 at 30.585 kb on + strand, within MPMX19_06764 at 30.585 kb on + strand, within MPMX19_06764 at 30.585 kb on + strand, within MPMX19_06764 at 30.585 kb on + strand, within MPMX19_06764 at 30.585 kb on + strand, within MPMX19_06764 at 30.585 kb on + strand, within MPMX19_06764 at 30.585 kb on + strand, within MPMX19_06764 at 30.585 kb on + strand, within MPMX19_06764 at 30.585 kb on + strand, within MPMX19_06764 at 30.586 kb on - strand, within MPMX19_06764 at 30.586 kb on - strand, within MPMX19_06764 at 30.586 kb on - strand, within MPMX19_06764 at 30.586 kb on - strand, within MPMX19_06764 at 30.586 kb on - strand, within MPMX19_06764 at 30.586 kb on - strand, within MPMX19_06764 at 30.586 kb on - strand, within MPMX19_06764 at 30.645 kb on + strand, within MPMX19_06764 at 30.645 kb on + strand, within MPMX19_06764 at 30.645 kb on + strand, within MPMX19_06764 at 30.645 kb on + strand, within MPMX19_06764 at 30.645 kb on + strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.646 kb on - strand, within MPMX19_06764 at 30.918 kb on + strand, within MPMX19_06764 at 30.919 kb on - strand, within MPMX19_06764 at 30.919 kb on - strand, within MPMX19_06764 at 30.919 kb on - strand, within MPMX19_06764 at 30.919 kb on - strand, within MPMX19_06764 at 30.919 kb on - strand, within MPMX19_06764 at 30.996 kb on + strand at 30.997 kb on - strand at 31.593 kb on + strand, within MPMX19_06765 at 31.594 kb on - strand, within MPMX19_06765 at 31.594 kb on - strand, within MPMX19_06765 at 32.136 kb on + strand at 32.136 kb on + strand at 32.137 kb on - strand at 32.137 kb on - strand at 32.137 kb on - strand at 32.160 kb on + strand at 32.160 kb on + strand at 32.160 kb on + strand at 32.161 kb on - strand at 32.265 kb on + strand at 32.265 kb on + strand at 32.265 kb on + strand at 32.266 kb on - strand at 32.435 kb on + strand, within MPMX19_06766
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 30,305 + +0.3 30,585 + MPMX19_06764 0.30 +1.2 30,585 + MPMX19_06764 0.30 +0.5 30,585 + MPMX19_06764 0.30 -0.8 30,585 + MPMX19_06764 0.30 -2.4 30,585 + MPMX19_06764 0.30 -0.9 30,585 + MPMX19_06764 0.30 -0.6 30,585 + MPMX19_06764 0.30 -1.1 30,585 + MPMX19_06764 0.30 -0.7 30,585 + MPMX19_06764 0.30 -1.6 30,585 + MPMX19_06764 0.30 -0.1 30,586 - MPMX19_06764 0.30 +0.3 30,586 - MPMX19_06764 0.30 -0.2 30,586 - MPMX19_06764 0.30 -0.6 30,586 - MPMX19_06764 0.30 -0.7 30,586 - MPMX19_06764 0.30 -1.5 30,586 - MPMX19_06764 0.30 -0.2 30,586 - MPMX19_06764 0.30 +1.9 30,645 + MPMX19_06764 0.39 -1.1 30,645 + MPMX19_06764 0.39 -0.2 30,645 + MPMX19_06764 0.39 -0.9 30,645 + MPMX19_06764 0.39 -0.5 30,645 + MPMX19_06764 0.39 -0.7 30,646 - MPMX19_06764 0.39 -0.1 30,646 - MPMX19_06764 0.39 -0.0 30,646 - MPMX19_06764 0.39 -0.9 30,646 - MPMX19_06764 0.39 -0.9 30,646 - MPMX19_06764 0.39 +1.1 30,646 - MPMX19_06764 0.39 -0.8 30,646 - MPMX19_06764 0.39 -2.0 30,646 - MPMX19_06764 0.39 +0.5 30,646 - MPMX19_06764 0.39 -1.2 30,646 - MPMX19_06764 0.39 +1.1 30,646 - MPMX19_06764 0.39 -1.4 30,918 + MPMX19_06764 0.79 -1.4 30,919 - MPMX19_06764 0.79 -1.6 30,919 - MPMX19_06764 0.79 -0.2 30,919 - MPMX19_06764 0.79 +0.1 30,919 - MPMX19_06764 0.79 -1.5 30,919 - MPMX19_06764 0.79 -2.2 30,996 + +0.5 30,997 - -0.0 31,593 + MPMX19_06765 0.53 +0.3 31,594 - MPMX19_06765 0.53 -3.3 31,594 - MPMX19_06765 0.53 -1.2 32,136 + +1.1 32,136 + +0.4 32,137 - -2.0 32,137 - -0.9 32,137 - -0.5 32,160 + +0.9 32,160 + -1.1 32,160 + +0.3 32,161 - +0.2 32,265 + -0.6 32,265 + -0.4 32,265 + +0.6 32,266 - +0.5 32,435 + MPMX19_06766 0.19 +0.1
Or see this region's nucleotide sequence