Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06753 and MPMX19_06754 are separated by 101 nucleotides MPMX19_06754 and MPMX19_06755 are separated by 88 nucleotides
MPMX19_06753: MPMX19_06753 - Guanidinopropionase, at 18,875 to 19,891
_06753
MPMX19_06754: MPMX19_06754 - hypothetical protein, at 19,993 to 20,913
_06754
MPMX19_06755: MPMX19_06755 - Hypotaurine/taurine--pyruvate aminotransferase, at 21,002 to 22,399
_06755
Position (kb) 19
20
21 Strain fitness (log2 ratio) -2
-1
0
1
2 at 19.134 kb on + strand, within MPMX19_06753 at 19.134 kb on + strand, within MPMX19_06753 at 19.134 kb on + strand, within MPMX19_06753 at 19.135 kb on - strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.263 kb on + strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.264 kb on - strand, within MPMX19_06753 at 19.312 kb on - strand, within MPMX19_06753 at 19.312 kb on - strand, within MPMX19_06753 at 19.353 kb on + strand, within MPMX19_06753 at 19.353 kb on + strand, within MPMX19_06753 at 19.354 kb on - strand, within MPMX19_06753 at 19.354 kb on - strand, within MPMX19_06753 at 19.354 kb on - strand, within MPMX19_06753 at 19.354 kb on - strand, within MPMX19_06753 at 19.354 kb on - strand, within MPMX19_06753 at 19.371 kb on + strand, within MPMX19_06753 at 19.372 kb on - strand, within MPMX19_06753 at 19.372 kb on - strand, within MPMX19_06753 at 19.452 kb on + strand, within MPMX19_06753 at 19.515 kb on + strand, within MPMX19_06753 at 19.515 kb on + strand, within MPMX19_06753 at 19.803 kb on + strand at 19.803 kb on + strand at 19.803 kb on + strand at 19.932 kb on - strand at 19.932 kb on - strand at 19.932 kb on - strand at 19.949 kb on - strand at 19.949 kb on - strand at 19.989 kb on + strand at 19.989 kb on + strand at 19.989 kb on + strand at 19.989 kb on + strand at 19.990 kb on - strand at 19.990 kb on - strand at 19.990 kb on - strand at 19.990 kb on - strand at 19.990 kb on - strand at 20.157 kb on + strand, within MPMX19_06754 at 20.158 kb on - strand, within MPMX19_06754 at 20.158 kb on - strand, within MPMX19_06754 at 20.158 kb on - strand, within MPMX19_06754 at 20.158 kb on - strand, within MPMX19_06754 at 20.215 kb on + strand, within MPMX19_06754 at 20.215 kb on + strand, within MPMX19_06754 at 20.216 kb on - strand, within MPMX19_06754 at 20.216 kb on - strand, within MPMX19_06754 at 20.216 kb on - strand, within MPMX19_06754 at 20.216 kb on - strand, within MPMX19_06754 at 20.216 kb on - strand, within MPMX19_06754 at 20.218 kb on - strand, within MPMX19_06754 at 20.367 kb on - strand, within MPMX19_06754 at 20.608 kb on + strand, within MPMX19_06754 at 20.608 kb on + strand, within MPMX19_06754 at 20.609 kb on - strand, within MPMX19_06754 at 20.609 kb on - strand, within MPMX19_06754 at 20.609 kb on - strand, within MPMX19_06754 at 20.609 kb on - strand, within MPMX19_06754 at 20.641 kb on + strand, within MPMX19_06754 at 20.641 kb on + strand, within MPMX19_06754 at 20.641 kb on + strand, within MPMX19_06754 at 20.641 kb on + strand, within MPMX19_06754 at 20.641 kb on + strand, within MPMX19_06754 at 20.642 kb on - strand, within MPMX19_06754 at 20.642 kb on - strand, within MPMX19_06754 at 20.680 kb on + strand, within MPMX19_06754 at 20.681 kb on - strand, within MPMX19_06754 at 20.681 kb on - strand, within MPMX19_06754 at 20.758 kb on + strand, within MPMX19_06754 at 20.758 kb on + strand, within MPMX19_06754 at 20.758 kb on + strand, within MPMX19_06754 at 20.759 kb on - strand, within MPMX19_06754 at 20.911 kb on + strand at 20.912 kb on - strand at 21.504 kb on + strand, within MPMX19_06755 at 21.504 kb on + strand, within MPMX19_06755 at 21.505 kb on - strand, within MPMX19_06755 at 21.505 kb on - strand, within MPMX19_06755 at 21.556 kb on - strand, within MPMX19_06755 at 21.663 kb on + strand, within MPMX19_06755 at 21.663 kb on + strand, within MPMX19_06755 at 21.663 kb on + strand, within MPMX19_06755 at 21.664 kb on - strand, within MPMX19_06755 at 21.786 kb on + strand, within MPMX19_06755 at 21.787 kb on - strand, within MPMX19_06755 at 21.817 kb on - strand, within MPMX19_06755
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 19,134 + MPMX19_06753 0.25 +0.2 19,134 + MPMX19_06753 0.25 -0.7 19,134 + MPMX19_06753 0.25 -0.1 19,135 - MPMX19_06753 0.26 +0.4 19,263 + MPMX19_06753 0.38 +0.7 19,263 + MPMX19_06753 0.38 -0.7 19,263 + MPMX19_06753 0.38 -1.9 19,263 + MPMX19_06753 0.38 +0.2 19,263 + MPMX19_06753 0.38 +1.1 19,263 + MPMX19_06753 0.38 -1.8 19,263 + MPMX19_06753 0.38 -0.7 19,263 + MPMX19_06753 0.38 -0.6 19,263 + MPMX19_06753 0.38 -0.6 19,263 + MPMX19_06753 0.38 -0.8 19,264 - MPMX19_06753 0.38 -0.6 19,264 - MPMX19_06753 0.38 -0.1 19,264 - MPMX19_06753 0.38 -0.6 19,264 - MPMX19_06753 0.38 -1.2 19,264 - MPMX19_06753 0.38 +0.4 19,264 - MPMX19_06753 0.38 -0.6 19,264 - MPMX19_06753 0.38 -0.5 19,264 - MPMX19_06753 0.38 -0.1 19,312 - MPMX19_06753 0.43 -0.4 19,312 - MPMX19_06753 0.43 -0.1 19,353 + MPMX19_06753 0.47 -0.5 19,353 + MPMX19_06753 0.47 -1.2 19,354 - MPMX19_06753 0.47 +0.2 19,354 - MPMX19_06753 0.47 -1.1 19,354 - MPMX19_06753 0.47 -0.3 19,354 - MPMX19_06753 0.47 -1.5 19,354 - MPMX19_06753 0.47 -0.5 19,371 + MPMX19_06753 0.49 -0.8 19,372 - MPMX19_06753 0.49 +0.3 19,372 - MPMX19_06753 0.49 +0.6 19,452 + MPMX19_06753 0.57 -1.1 19,515 + MPMX19_06753 0.63 -0.9 19,515 + MPMX19_06753 0.63 +1.5 19,803 + -1.9 19,803 + -0.4 19,803 + -0.9 19,932 - +0.2 19,932 - +0.1 19,932 - +0.5 19,949 - -1.5 19,949 - +0.7 19,989 + -1.2 19,989 + -1.9 19,989 + +0.2 19,989 + -0.0 19,990 - -1.6 19,990 - +1.1 19,990 - -1.5 19,990 - -1.1 19,990 - -0.2 20,157 + MPMX19_06754 0.18 -0.5 20,158 - MPMX19_06754 0.18 +0.4 20,158 - MPMX19_06754 0.18 -1.4 20,158 - MPMX19_06754 0.18 +1.1 20,158 - MPMX19_06754 0.18 +0.1 20,215 + MPMX19_06754 0.24 +0.6 20,215 + MPMX19_06754 0.24 -0.8 20,216 - MPMX19_06754 0.24 -1.1 20,216 - MPMX19_06754 0.24 -0.7 20,216 - MPMX19_06754 0.24 -0.9 20,216 - MPMX19_06754 0.24 -0.4 20,216 - MPMX19_06754 0.24 +1.7 20,218 - MPMX19_06754 0.24 +0.3 20,367 - MPMX19_06754 0.41 -0.1 20,608 + MPMX19_06754 0.67 -1.4 20,608 + MPMX19_06754 0.67 -2.3 20,609 - MPMX19_06754 0.67 -0.4 20,609 - MPMX19_06754 0.67 +0.3 20,609 - MPMX19_06754 0.67 +0.1 20,609 - MPMX19_06754 0.67 +0.1 20,641 + MPMX19_06754 0.70 -0.1 20,641 + MPMX19_06754 0.70 -0.8 20,641 + MPMX19_06754 0.70 -0.0 20,641 + MPMX19_06754 0.70 -1.4 20,641 + MPMX19_06754 0.70 -0.4 20,642 - MPMX19_06754 0.70 -1.8 20,642 - MPMX19_06754 0.70 +0.6 20,680 + MPMX19_06754 0.75 -0.6 20,681 - MPMX19_06754 0.75 +2.4 20,681 - MPMX19_06754 0.75 +0.6 20,758 + MPMX19_06754 0.83 +0.4 20,758 + MPMX19_06754 0.83 -1.5 20,758 + MPMX19_06754 0.83 -0.7 20,759 - MPMX19_06754 0.83 -1.3 20,911 + -0.9 20,912 - -1.9 21,504 + MPMX19_06755 0.36 +0.1 21,504 + MPMX19_06755 0.36 -0.9 21,505 - MPMX19_06755 0.36 -2.2 21,505 - MPMX19_06755 0.36 -0.2 21,556 - MPMX19_06755 0.40 -1.2 21,663 + MPMX19_06755 0.47 -1.2 21,663 + MPMX19_06755 0.47 +0.2 21,663 + MPMX19_06755 0.47 -0.6 21,664 - MPMX19_06755 0.47 -0.9 21,786 + MPMX19_06755 0.56 -1.2 21,787 - MPMX19_06755 0.56 -0.1 21,817 - MPMX19_06755 0.58 +0.3
Or see this region's nucleotide sequence