Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06695 and MPMX19_06696 are separated by 193 nucleotides MPMX19_06696 and MPMX19_06697 are separated by 154 nucleotides MPMX19_06697 and MPMX19_06698 are separated by 11 nucleotides MPMX19_06698 and MPMX19_06699 are separated by 12 nucleotides
MPMX19_06695: MPMX19_06695 - hypothetical protein, at 264,964 to 266,169
_06695
MPMX19_06696: MPMX19_06696 - hypothetical protein, at 266,363 to 266,851
_06696
MPMX19_06697: MPMX19_06697 - D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase, at 267,006 to 267,548
_06697
MPMX19_06698: MPMX19_06698 - hypothetical protein, at 267,560 to 267,949
_06698
MPMX19_06699: MPMX19_06699 - Nickel/cobalt efflux system RcnA, at 267,962 to 268,831
_06699
Position (kb) 267
268 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.135 kb on + strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.136 kb on - strand at 266.171 kb on - strand at 266.171 kb on - strand at 266.219 kb on + strand at 266.498 kb on + strand, within MPMX19_06696 at 266.498 kb on + strand, within MPMX19_06696 at 266.498 kb on + strand, within MPMX19_06696 at 266.498 kb on + strand, within MPMX19_06696 at 266.498 kb on + strand, within MPMX19_06696 at 266.499 kb on - strand, within MPMX19_06696 at 266.499 kb on - strand, within MPMX19_06696 at 266.899 kb on + strand at 266.899 kb on + strand at 266.899 kb on + strand at 266.900 kb on - strand at 266.984 kb on + strand at 266.984 kb on + strand at 266.984 kb on + strand at 267.555 kb on - strand at 267.561 kb on + strand at 267.561 kb on + strand at 267.561 kb on + strand at 267.562 kb on - strand at 267.562 kb on - strand at 267.774 kb on + strand, within MPMX19_06698 at 267.774 kb on + strand, within MPMX19_06698 at 267.775 kb on - strand, within MPMX19_06698 at 267.775 kb on - strand, within MPMX19_06698 at 267.775 kb on - strand, within MPMX19_06698 at 267.825 kb on + strand, within MPMX19_06698 at 267.826 kb on - strand, within MPMX19_06698 at 267.826 kb on - strand, within MPMX19_06698 at 267.826 kb on - strand, within MPMX19_06698 at 267.826 kb on - strand, within MPMX19_06698 at 267.826 kb on - strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.963 kb on + strand at 267.963 kb on + strand at 268.014 kb on + strand at 268.014 kb on + strand at 268.014 kb on + strand at 268.015 kb on - strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 266,135 + -0.0 266,135 + +0.3 266,135 + -1.2 266,135 + -1.0 266,135 + -1.7 266,135 + +0.1 266,135 + +1.3 266,135 + -0.2 266,135 + -1.2 266,135 + -0.5 266,135 + -0.2 266,135 + -0.8 266,135 + -0.2 266,135 + -0.5 266,135 + -0.7 266,135 + +0.7 266,135 + -1.6 266,135 + -0.2 266,135 + -0.7 266,135 + -1.7 266,136 - -0.2 266,136 - -0.7 266,136 - -1.6 266,136 - -0.5 266,136 - -1.1 266,136 - -0.0 266,136 - +0.4 266,136 - -0.9 266,136 - -0.7 266,136 - -0.7 266,136 - +0.9 266,136 - -0.9 266,136 - -0.2 266,136 - -0.1 266,136 - -1.2 266,136 - -1.7 266,136 - -1.4 266,171 - -3.1 266,171 - -1.4 266,219 + -0.6 266,498 + MPMX19_06696 0.28 -1.2 266,498 + MPMX19_06696 0.28 +0.1 266,498 + MPMX19_06696 0.28 -2.1 266,498 + MPMX19_06696 0.28 +0.3 266,498 + MPMX19_06696 0.28 -0.5 266,499 - MPMX19_06696 0.28 -0.9 266,499 - MPMX19_06696 0.28 -0.1 266,899 + -0.1 266,899 + -0.6 266,899 + -0.8 266,900 - -0.4 266,984 + +1.3 266,984 + +0.5 266,984 + +0.1 267,555 - -0.2 267,561 + -1.4 267,561 + -0.0 267,561 + +1.1 267,562 - +0.9 267,562 - +1.0 267,774 + MPMX19_06698 0.55 +0.2 267,774 + MPMX19_06698 0.55 +0.3 267,775 - MPMX19_06698 0.55 -1.1 267,775 - MPMX19_06698 0.55 -0.9 267,775 - MPMX19_06698 0.55 -1.4 267,825 + MPMX19_06698 0.68 -0.2 267,826 - MPMX19_06698 0.68 -1.2 267,826 - MPMX19_06698 0.68 -0.6 267,826 - MPMX19_06698 0.68 -0.7 267,826 - MPMX19_06698 0.68 +0.6 267,826 - MPMX19_06698 0.68 -0.6 267,891 + MPMX19_06698 0.85 -0.4 267,891 + MPMX19_06698 0.85 -0.4 267,891 + MPMX19_06698 0.85 -0.5 267,891 + MPMX19_06698 0.85 -2.6 267,891 + MPMX19_06698 0.85 -0.4 267,891 + MPMX19_06698 0.85 -0.5 267,891 + MPMX19_06698 0.85 -0.1 267,892 - MPMX19_06698 0.85 -0.4 267,892 - MPMX19_06698 0.85 -0.3 267,892 - MPMX19_06698 0.85 -0.3 267,892 - MPMX19_06698 0.85 -0.5 267,892 - MPMX19_06698 0.85 +0.1 267,892 - MPMX19_06698 0.85 -1.6 267,892 - MPMX19_06698 0.85 +0.1 267,963 + -0.5 267,963 + -0.1 268,014 + -0.2 268,014 + +0.2 268,014 + -0.2 268,015 - -0.8 268,047 + -1.2 268,047 + -0.1 268,047 + -0.2 268,047 + -1.5 268,047 + -0.6 268,047 + -0.5 268,047 + -0.1 268,047 + +0.4 268,047 + -0.5 268,048 - -1.7 268,048 - -1.7 268,048 - -0.7 268,048 - -0.2 268,048 - -0.2 268,048 - -1.1 268,048 - -0.1 268,083 + MPMX19_06699 0.14 -0.1 268,083 + MPMX19_06699 0.14 +0.9 268,083 + MPMX19_06699 0.14 -1.5 268,083 + MPMX19_06699 0.14 -0.2 268,083 + MPMX19_06699 0.14 -0.4 268,083 + MPMX19_06699 0.14 -0.3 268,083 + MPMX19_06699 0.14 -0.6 268,083 + MPMX19_06699 0.14 -0.2 268,083 + MPMX19_06699 0.14 +0.4 268,083 + MPMX19_06699 0.14 -1.0 268,083 + MPMX19_06699 0.14 +0.5 268,084 - MPMX19_06699 0.14 +1.1 268,084 - MPMX19_06699 0.14 -1.5 268,084 - MPMX19_06699 0.14 -0.1 268,084 - MPMX19_06699 0.14 -0.7 268,084 - MPMX19_06699 0.14 +0.1 268,084 - MPMX19_06699 0.14 +0.6 268,084 - MPMX19_06699 0.14 +0.3 268,084 - MPMX19_06699 0.14 -0.4 268,084 - MPMX19_06699 0.14 -1.1 268,084 - MPMX19_06699 0.14 +1.1 268,084 - MPMX19_06699 0.14 +0.1 268,084 - MPMX19_06699 0.14 -1.8
Or see this region's nucleotide sequence