Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06672 and MPMX19_06673 are separated by 359 nucleotides MPMX19_06673 and MPMX19_06674 are separated by 602 nucleotides
MPMX19_06672: MPMX19_06672 - hypothetical protein, at 236,113 to 236,790
_06672
MPMX19_06673: MPMX19_06673 - hypothetical protein, at 237,150 to 237,242
_06673
MPMX19_06674: MPMX19_06674 - hypothetical protein, at 237,845 to 238,279
_06674
Position (kb) 237
238 Strain fitness (log2 ratio) -2
-1
0
1
2 at 236.851 kb on + strand at 236.851 kb on + strand at 236.851 kb on + strand at 236.851 kb on + strand at 236.852 kb on - strand at 236.852 kb on - strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.090 kb on + strand at 237.091 kb on - strand at 237.094 kb on + strand at 237.094 kb on + strand at 237.095 kb on - strand at 237.112 kb on - strand at 237.339 kb on + strand at 237.339 kb on + strand at 237.339 kb on + strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.372 kb on + strand at 237.384 kb on + strand at 237.385 kb on - strand at 237.385 kb on - strand at 237.385 kb on - strand at 237.432 kb on + strand at 237.432 kb on + strand at 237.507 kb on + strand at 237.507 kb on + strand at 237.507 kb on + strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.686 kb on + strand at 237.687 kb on - strand at 237.782 kb on + strand at 237.782 kb on + strand at 237.782 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 236,851 + +1.1 236,851 + -0.1 236,851 + -0.3 236,851 + -0.8 236,852 - +0.6 236,852 - +1.2 237,045 + +0.9 237,045 + +0.2 237,045 + +1.6 237,045 + +0.8 237,045 + +0.3 237,045 + -1.3 237,045 + -1.1 237,045 + +0.6 237,045 + +0.3 237,045 + +0.2 237,045 + -0.7 237,045 + +0.8 237,045 + -0.3 237,045 + -0.9 237,045 + -0.4 237,045 + +1.1 237,045 + +0.8 237,045 + +0.1 237,045 + -0.2 237,045 + -2.4 237,046 - -0.6 237,046 - +0.5 237,046 - +0.1 237,046 - -1.6 237,046 - +1.5 237,046 - -0.2 237,046 - -0.2 237,046 - +1.1 237,046 - -0.4 237,046 - -1.4 237,046 - -1.8 237,046 - +0.3 237,046 - +0.5 237,046 - -2.3 237,046 - +0.7 237,046 - +0.1 237,046 - +0.9 237,046 - -1.8 237,046 - -0.8 237,046 - +0.1 237,090 + -0.7 237,091 - +0.2 237,094 + +0.5 237,094 + +0.3 237,095 - +0.5 237,112 - -1.5 237,339 + -0.9 237,339 + -0.7 237,339 + -1.7 237,340 - +0.5 237,340 - -1.2 237,340 - -0.2 237,340 - -0.4 237,340 - -0.4 237,340 - +0.7 237,340 - +0.3 237,340 - -1.6 237,372 + +0.6 237,384 + -1.2 237,385 - +1.4 237,385 - -1.3 237,385 - -0.0 237,432 + -0.0 237,432 + -0.4 237,507 + -0.5 237,507 + -0.0 237,507 + -0.2 237,508 - +0.3 237,508 - +0.5 237,508 - -0.6 237,508 - +0.6 237,508 - +0.3 237,517 + -0.7 237,517 + +0.1 237,517 + -0.9 237,517 + -0.7 237,517 + -0.0 237,517 + -0.7 237,517 + -0.4 237,517 + +1.8 237,517 + -1.2 237,517 + -0.1 237,518 - +0.2 237,518 - +0.8 237,518 - -0.5 237,518 - +0.1 237,518 - -0.5 237,518 - -1.2 237,686 + -1.6 237,687 - -0.2 237,782 + -0.8 237,782 + -0.7 237,782 + +0.1
Or see this region's nucleotide sequence