Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06488 and MPMX19_06489 are separated by 25 nucleotides MPMX19_06489 and MPMX19_06490 overlap by 4 nucleotides MPMX19_06490 and MPMX19_06491 are separated by 54 nucleotides
MPMX19_06488: MPMX19_06488 - Taurine-binding periplasmic protein, at 271,441 to 272,457
_06488
MPMX19_06489: MPMX19_06489 - Taurine import ATP-binding protein TauB, at 272,483 to 273,286
_06489
MPMX19_06490: MPMX19_06490 - Putative aliphatic sulfonates transport permease protein SsuC, at 273,283 to 274,134
_06490
MPMX19_06491: MPMX19_06491 - Alpha-ketoglutarate-dependent taurine dioxygenase, at 274,189 to 275,040
_06491
Position (kb) 273
274
275 Strain fitness (log2 ratio) -2
-1
0
1 at 272.347 kb on - strand, within MPMX19_06488 at 272.437 kb on + strand at 272.437 kb on + strand at 272.437 kb on + strand at 272.437 kb on + strand at 272.672 kb on - strand, within MPMX19_06489 at 272.672 kb on - strand, within MPMX19_06489 at 272.672 kb on - strand, within MPMX19_06489 at 273.215 kb on + strand at 273.215 kb on + strand at 273.215 kb on + strand at 273.216 kb on - strand at 273.216 kb on - strand at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.521 kb on - strand, within MPMX19_06490 at 273.909 kb on - strand, within MPMX19_06490 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.604 kb on - strand, within MPMX19_06491 at 274.604 kb on - strand, within MPMX19_06491 at 274.604 kb on - strand, within MPMX19_06491 at 274.876 kb on + strand, within MPMX19_06491 at 274.876 kb on + strand, within MPMX19_06491 at 274.876 kb on + strand, within MPMX19_06491 at 274.877 kb on - strand, within MPMX19_06491 at 274.877 kb on - strand, within MPMX19_06491 at 274.884 kb on + strand, within MPMX19_06491 at 274.885 kb on - strand, within MPMX19_06491 at 274.885 kb on - strand, within MPMX19_06491 at 274.900 kb on + strand, within MPMX19_06491 at 274.900 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.982 kb on - strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.002 kb on - strand at 275.036 kb on - strand at 275.072 kb on - strand at 275.103 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 272,347 - MPMX19_06488 0.89 +0.7 272,437 + -0.1 272,437 + +0.0 272,437 + -0.6 272,437 + -0.1 272,672 - MPMX19_06489 0.24 -0.9 272,672 - MPMX19_06489 0.24 -0.3 272,672 - MPMX19_06489 0.24 -0.1 273,215 + -1.3 273,215 + +0.7 273,215 + +1.1 273,216 - +0.1 273,216 - -0.1 273,521 - MPMX19_06490 0.28 -0.2 273,521 - MPMX19_06490 0.28 -0.6 273,521 - MPMX19_06490 0.28 +0.9 273,521 - MPMX19_06490 0.28 -0.5 273,521 - MPMX19_06490 0.28 -0.3 273,521 - MPMX19_06490 0.28 -0.1 273,909 - MPMX19_06490 0.73 -0.8 274,603 + MPMX19_06491 0.49 -0.8 274,603 + MPMX19_06491 0.49 -0.8 274,603 + MPMX19_06491 0.49 -0.3 274,603 + MPMX19_06491 0.49 -0.1 274,603 + MPMX19_06491 0.49 -0.7 274,603 + MPMX19_06491 0.49 -0.8 274,604 - MPMX19_06491 0.49 -1.2 274,604 - MPMX19_06491 0.49 -1.5 274,604 - MPMX19_06491 0.49 +0.8 274,876 + MPMX19_06491 0.81 -0.8 274,876 + MPMX19_06491 0.81 +0.4 274,876 + MPMX19_06491 0.81 +0.2 274,877 - MPMX19_06491 0.81 -0.7 274,877 - MPMX19_06491 0.81 -0.7 274,884 + MPMX19_06491 0.82 -0.4 274,885 - MPMX19_06491 0.82 -0.2 274,885 - MPMX19_06491 0.82 -0.8 274,900 + MPMX19_06491 0.83 -1.0 274,900 + MPMX19_06491 0.83 +0.1 274,950 + MPMX19_06491 0.89 +0.0 274,950 + MPMX19_06491 0.89 +0.1 274,950 + MPMX19_06491 0.89 -1.0 274,950 + MPMX19_06491 0.89 +0.1 274,950 + MPMX19_06491 0.89 -1.8 274,951 - MPMX19_06491 0.89 +1.2 274,951 - MPMX19_06491 0.89 +0.5 274,951 - MPMX19_06491 0.89 +0.4 274,951 - MPMX19_06491 0.89 +0.2 274,982 - -1.5 275,001 + +0.1 275,001 + -0.1 275,001 + -0.1 275,001 + -0.3 275,001 + -1.7 275,001 + +1.4 275,002 - -1.5 275,036 - +0.8 275,072 - +0.1 275,103 - +0.3
Or see this region's nucleotide sequence