Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06445 and MPMX19_06446 are separated by 218 nucleotides MPMX19_06446 and MPMX19_06447 are separated by 241 nucleotides MPMX19_06447 and MPMX19_06448 are separated by 34 nucleotides
MPMX19_06445: MPMX19_06445 - putative membrane protein, at 219,436 to 220,068
_06445
MPMX19_06446: MPMX19_06446 - hypothetical protein, at 220,287 to 220,640
_06446
MPMX19_06447: MPMX19_06447 - hypothetical protein, at 220,882 to 221,283
_06447
MPMX19_06448: MPMX19_06448 - hypothetical protein, at 221,318 to 222,112
_06448
Position (kb) 220
221
222 Strain fitness (log2 ratio) -2
-1
0
1 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.889 kb on + strand, within MPMX19_06448 at 221.988 kb on + strand, within MPMX19_06448 at 222.163 kb on + strand at 222.163 kb on + strand at 222.163 kb on + strand at 222.163 kb on + strand at 222.164 kb on - strand at 222.164 kb on - strand at 222.238 kb on + strand at 222.238 kb on + strand at 222.239 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 221,889 + MPMX19_06448 0.72 -0.2 221,889 + MPMX19_06448 0.72 -0.6 221,889 + MPMX19_06448 0.72 -1.3 221,889 + MPMX19_06448 0.72 -0.2 221,889 + MPMX19_06448 0.72 -1.5 221,889 + MPMX19_06448 0.72 -0.8 221,889 + MPMX19_06448 0.72 -1.1 221,889 + MPMX19_06448 0.72 -0.8 221,889 + MPMX19_06448 0.72 -1.7 221,889 + MPMX19_06448 0.72 -0.4 221,889 + MPMX19_06448 0.72 -0.8 221,889 + MPMX19_06448 0.72 -1.1 221,889 + MPMX19_06448 0.72 -0.9 221,889 + MPMX19_06448 0.72 -0.8 221,889 + MPMX19_06448 0.72 -0.3 221,988 + MPMX19_06448 0.84 -0.5 222,163 + +0.4 222,163 + +0.2 222,163 + +0.7 222,163 + -1.8 222,164 - -0.2 222,164 - -1.2 222,238 + +0.1 222,238 + +0.5 222,239 - -0.4
Or see this region's nucleotide sequence