Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06338

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
105,869	-		MPMX19_06336	0.60	-1.1
105,869	-		MPMX19_06336	0.60	-2.6
106,019	-		MPMX19_06336	0.73	-0.8
106,030	+		MPMX19_06336	0.74	-0.2
106,030	+		MPMX19_06336	0.74	-1.7
106,030	+		MPMX19_06336	0.74	+0.2
106,042	+		MPMX19_06336	0.75	-0.1
106,042	+		MPMX19_06336	0.75	+0.3
106,043	-		MPMX19_06336	0.75	+0.4
106,043	-		MPMX19_06336	0.75	-1.2
106,043	-		MPMX19_06336	0.75	-1.8
106,287	+				-0.1
106,356	+				+0.4
106,356	+				+0.5
106,374	+				-1.3
106,374	+				-0.3
106,374	+				-0.1
106,374	+				+0.9
106,374	+				-0.3
106,374	+				-2.0
106,374	+				-0.6
106,375	-				-1.2
106,375	-				-0.5
106,375	-				-0.6
106,375	-				-0.6
106,375	-				-0.1
106,375	-				+1.2
106,375	-				-0.8
106,375	-				+0.5
106,375	-				-0.3
106,377	+				-1.0
106,377	+				+0.2
106,377	+				-0.3
106,377	+				+0.1
106,377	+				-1.1
106,377	+				+0.4
106,378	-				-0.8
106,378	-				-0.8
106,412	+				+0.1
106,412	+				-0.6
106,453	+				-0.3
106,453	+				-0.3
106,453	+				-0.8
106,484	-				-0.3
106,489	+				-1.6
106,490	-				-1.3
106,495	+				-0.2
106,495	+				+0.4
106,495	+				-0.1
106,495	+				-0.6
106,495	+				-1.3
106,495	+				-0.8
106,496	-				-0.9
106,496	-				-1.6
106,496	-				-0.9
106,496	-				-0.9
106,496	-				-1.7
106,496	-				-1.7
106,496	-				-1.1
106,528	-				-1.3
106,700	+		MPMX19_06337	0.58	-0.8
106,700	+		MPMX19_06337	0.58	+0.1
106,700	+		MPMX19_06337	0.58	-0.7
106,701	-		MPMX19_06337	0.58	+0.2
106,701	-		MPMX19_06337	0.58	-0.2
106,701	-		MPMX19_06337	0.58	-0.7
106,701	-		MPMX19_06337	0.58	-1.3
106,701	-		MPMX19_06337	0.58	-0.1
106,701	-		MPMX19_06337	0.58	-0.5
106,701	-		MPMX19_06337	0.58	-1.8
106,880	+				-0.1
106,881	-				-1.8
106,905	+				-1.9
106,906	-				-0.3
107,036	-		MPMX19_06338	0.18	-0.1
107,058	+		MPMX19_06338	0.20	-0.6
107,059	-		MPMX19_06338	0.20	-0.1
107,059	-		MPMX19_06338	0.20	-0.0
107,089	-		MPMX19_06338	0.23	-0.8
107,089	-		MPMX19_06338	0.23	-0.3
107,280	+		MPMX19_06338	0.43	-0.4
107,280	+		MPMX19_06338	0.43	+0.9
107,280	+		MPMX19_06338	0.43	-0.3
107,280	+		MPMX19_06338	0.43	+0.0
107,280	+		MPMX19_06338	0.43	-0.1
107,280	+		MPMX19_06338	0.43	-1.1
107,280	+		MPMX19_06338	0.43	-1.3
107,280	+		MPMX19_06338	0.43	-0.1
107,280	+		MPMX19_06338	0.43	-0.8
107,280	+		MPMX19_06338	0.43	+0.4
107,280	+		MPMX19_06338	0.43	+0.2
107,280	+		MPMX19_06338	0.43	-0.6
107,280	+		MPMX19_06338	0.43	-1.6
107,280	+		MPMX19_06338	0.43	+0.2
107,280	+		MPMX19_06338	0.43	-0.0
107,280	+		MPMX19_06338	0.43	-1.5
107,280	+		MPMX19_06338	0.43	-0.3
107,280	+		MPMX19_06338	0.43	-1.1
107,280	+		MPMX19_06338	0.43	-0.4
107,280	+		MPMX19_06338	0.43	-0.9
107,280	+		MPMX19_06338	0.43	-0.1
107,280	+		MPMX19_06338	0.43	+0.4
107,280	+		MPMX19_06338	0.43	-1.1
107,280	+		MPMX19_06338	0.43	+0.5
107,281	-		MPMX19_06338	0.43	-0.8
107,281	-		MPMX19_06338	0.43	-0.2
107,281	-		MPMX19_06338	0.43	-0.6
107,281	-		MPMX19_06338	0.43	-0.9
107,281	-		MPMX19_06338	0.43	+0.7
107,281	-		MPMX19_06338	0.43	+0.7
107,281	-		MPMX19_06338	0.43	-0.1
107,281	-		MPMX19_06338	0.43	-0.6
107,281	-		MPMX19_06338	0.43	-2.4
107,281	-		MPMX19_06338	0.43	-0.7
107,281	-		MPMX19_06338	0.43	+1.8
107,281	-		MPMX19_06338	0.43	-1.8
107,281	-		MPMX19_06338	0.43	+1.2
107,281	-		MPMX19_06338	0.43	-0.4
107,281	-		MPMX19_06338	0.43	-0.8
107,281	-		MPMX19_06338	0.43	-0.9
107,281	-		MPMX19_06338	0.43	+0.9
107,300	+		MPMX19_06338	0.45	-1.8
107,300	+		MPMX19_06338	0.45	+0.2
107,300	+		MPMX19_06338	0.45	-0.3
107,300	+		MPMX19_06338	0.45	+1.5
107,301	-		MPMX19_06338	0.45	+0.1
107,349	+		MPMX19_06338	0.50	+0.0
107,349	+		MPMX19_06338	0.50	+0.3
107,349	+		MPMX19_06338	0.50	-0.0
107,349	+		MPMX19_06338	0.50	-0.6
107,349	+		MPMX19_06338	0.50	+1.2
107,349	+		MPMX19_06338	0.50	-1.1
107,350	-		MPMX19_06338	0.50	+1.2
107,350	-		MPMX19_06338	0.50	+0.2
107,350	-		MPMX19_06338	0.50	-1.5
107,350	-		MPMX19_06338	0.50	+0.2
107,350	-		MPMX19_06338	0.50	-1.8
107,350	-		MPMX19_06338	0.50	+1.3
107,361	+		MPMX19_06338	0.51	+1.7
107,361	+		MPMX19_06338	0.51	-0.3
107,361	+		MPMX19_06338	0.51	-0.1
107,361	+		MPMX19_06338	0.51	-0.8
107,361	+		MPMX19_06338	0.51	+0.1
107,361	+		MPMX19_06338	0.51	+0.0
107,361	+		MPMX19_06338	0.51	+0.9
107,362	-		MPMX19_06338	0.51	-0.6
107,362	-		MPMX19_06338	0.51	+1.9
107,362	-		MPMX19_06338	0.51	+1.1
107,362	-		MPMX19_06338	0.51	-1.4
107,362	-		MPMX19_06338	0.51	-0.6
107,362	-		MPMX19_06338	0.51	-1.1
107,362	-		MPMX19_06338	0.51	-1.3
107,362	-		MPMX19_06338	0.51	-0.5
107,433	+		MPMX19_06338	0.59	-0.2
107,434	-		MPMX19_06338	0.59	+0.8
107,478	+		MPMX19_06338	0.63	+1.9
107,478	+		MPMX19_06338	0.63	-0.2
107,478	+		MPMX19_06338	0.63	+0.6
107,479	-		MPMX19_06338	0.63	-0.1
107,479	-		MPMX19_06338	0.63	-0.6
107,479	-		MPMX19_06338	0.63	+0.2
107,520	+		MPMX19_06338	0.68	-1.2
107,520	+		MPMX19_06338	0.68	+0.7
107,520	+		MPMX19_06338	0.68	-0.1
107,520	+		MPMX19_06338	0.68	-0.3
107,521	-		MPMX19_06338	0.68	-0.7
107,521	-		MPMX19_06338	0.68	+1.0
107,521	-		MPMX19_06338	0.68	+0.0
107,521	-		MPMX19_06338	0.68	-0.1
107,521	-		MPMX19_06338	0.68	+1.1
107,521	-		MPMX19_06338	0.68	+0.7
107,521	-		MPMX19_06338	0.68	-0.8
107,547	+		MPMX19_06338	0.70	-0.9
107,547	+		MPMX19_06338	0.70	-0.6
107,547	+		MPMX19_06338	0.70	+0.1
107,547	+		MPMX19_06338	0.70	-1.6
107,547	+		MPMX19_06338	0.70	-0.5
107,547	+		MPMX19_06338	0.70	-0.0
107,698	+		MPMX19_06338	0.86	-0.5
107,699	-		MPMX19_06338	0.86	-0.4
107,699	-		MPMX19_06338	0.86	-0.3
107,699	-		MPMX19_06338	0.86	+0.7
107,805	+				-0.6
107,805	+				+0.4
107,805	+				-0.6
108,087	+				+0.2
108,087	+				+0.4
108,088	-				-1.8
108,088	-				-0.1
108,130	+				+0.1
108,130	+				-1.0
108,172	+				-0.9
108,172	+				+1.0
108,173	-				+0.8
108,173	-				-2.0
108,173	-				-0.8
108,173	-				-0.3
108,175	+				+0.1
108,175	+				+2.5
108,319	+		MPMX19_06340	0.37	-0.5
108,319	+		MPMX19_06340	0.37	-2.4
108,320	-		MPMX19_06340	0.37	-0.9
108,344	+		MPMX19_06340	0.53	+1.0
108,344	+		MPMX19_06340	0.53	-1.0
108,345	-		MPMX19_06340	0.54	-2.0
108,345	-		MPMX19_06340	0.54	-0.1
108,345	-		MPMX19_06340	0.54	-0.8
108,348	+		MPMX19_06340	0.56	+0.9
108,349	-		MPMX19_06340	0.57	-0.6
108,485	+				-1.9
108,485	+				-1.3
108,485	+				-0.5
108,486	-				-0.9
108,486	-				-1.3
108,606	+		MPMX19_06341	0.34	-0.9
108,606	+		MPMX19_06341	0.34	-0.1
108,606	+		MPMX19_06341	0.34	+0.3
108,606	+		MPMX19_06341	0.34	+0.7
108,606	+		MPMX19_06341	0.34	-2.2
108,606	+		MPMX19_06341	0.34	+0.2
108,606	+		MPMX19_06341	0.34	+0.4
108,606	+		MPMX19_06341	0.34	-0.5
108,607	-		MPMX19_06341	0.34	-0.5
108,607	-		MPMX19_06341	0.34	+0.7
108,607	-		MPMX19_06341	0.34	-0.1
108,607	-		MPMX19_06341	0.34	+0.7
108,607	-		MPMX19_06341	0.34	-0.6
108,607	-		MPMX19_06341	0.34	-0.0
108,607	-		MPMX19_06341	0.34	+0.2
108,607	-		MPMX19_06341	0.34	-0.6
108,825	-				-1.2