Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06334

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
101,400	+		MPMX19_06333	0.65	+0.1
101,400	+		MPMX19_06333	0.65	-0.6
101,400	+		MPMX19_06333	0.65	-1.1
101,400	+		MPMX19_06333	0.65	-0.6
101,401	-		MPMX19_06333	0.65	-1.6
101,401	-		MPMX19_06333	0.65	+0.8
101,401	-		MPMX19_06333	0.65	-1.0
101,401	-		MPMX19_06333	0.65	-0.2
101,401	-		MPMX19_06333	0.65	+0.2
101,481	+		MPMX19_06333	0.71	-1.8
101,481	+		MPMX19_06333	0.71	+0.1
101,481	+		MPMX19_06333	0.71	-1.1
101,482	-		MPMX19_06333	0.71	-0.6
101,482	-		MPMX19_06333	0.71	-0.1
101,482	-		MPMX19_06333	0.71	-0.8
101,482	-		MPMX19_06333	0.71	-0.5
101,493	+		MPMX19_06333	0.72	+0.4
101,493	+		MPMX19_06333	0.72	+0.8
101,739	+				-2.5
101,739	+				-1.3
101,739	+				-1.3
101,739	+				-0.3
101,739	+				-1.1
101,739	+				+0.4
101,739	+				+0.4
101,740	-				-0.2
101,740	-				-1.6
101,740	-				-1.7
101,740	-				-0.9
101,740	-				+0.7
101,740	-				-0.8
101,740	-				+0.0
101,740	-				-1.0
101,740	-				-1.2
101,740	-				-0.8
101,740	-				+0.9
101,740	-				+1.2
101,818	+				-0.5
101,818	+				+0.4
101,819	-				-1.9
101,819	-				+0.2
101,865	+				-1.8
101,865	+				-1.2
101,983	+				+0.1
101,983	+				-1.3
101,983	+				-1.1
101,984	-				-0.6
101,984	-				-0.9
101,984	-				-0.6
101,993	+				+0.4
101,993	+				-1.5
101,993	+				+0.5
101,993	+				-0.1
101,993	+				+0.2
101,993	+				+0.7
101,993	+				+0.4
101,994	-				+0.4
101,994	-				+0.4
101,994	-				-0.3
101,994	-				-0.3
101,994	-				-1.1
101,994	-				-1.1
101,994	-				-1.5
101,994	-				+1.4
101,994	-				-1.9
101,999	+				-0.7
101,999	+				-0.1
101,999	+				-1.5
101,999	+				-0.3
101,999	+				-0.3
102,000	-				-0.8
102,000	-				-0.6
102,000	-				-0.9
102,000	-				-0.3
102,000	-				-0.3
102,000	-				-0.2
102,000	-				-0.1
102,000	-				-0.0
102,000	-				-1.8
102,000	-				+0.3
102,000	-				-1.8
102,059	+				+0.4
102,060	-				-0.2
102,221	+		MPMX19_06334	0.25	-0.8
102,371	+		MPMX19_06334	0.52	-0.8
102,371	+		MPMX19_06334	0.52	-1.6
102,372	-		MPMX19_06334	0.53	+0.7
102,372	-		MPMX19_06334	0.53	+0.3
102,411	-		MPMX19_06334	0.60	-2.1
102,578	+		MPMX19_06334	0.90	-0.3
102,579	-				-0.1
102,579	-				-0.8
102,579	-				+0.7
102,579	-				+0.1
102,652	+				-0.6
102,652	+				+0.5
102,652	+				-1.1
102,652	+				+0.1
102,652	+				-1.2
102,652	+				+0.1
102,652	+				+0.1
102,652	+				+0.9
102,652	+				+0.2
102,653	-				-0.3
102,653	-				-0.8
102,653	-				-1.1
102,653	-				-0.3
102,653	-				+0.2
102,653	-				-1.3
102,653	-				+0.2
102,653	-				+1.1
102,653	-				+0.7
102,653	-				-1.3
102,653	-				+0.2
102,742	+				-2.2
102,742	+				-1.9
102,742	+				-0.9
102,850	+				-0.2
102,851	-				+0.6
102,865	+				-0.8
102,865	+				-0.9
102,865	+				-0.3
102,866	-				-0.3
102,866	-				-1.1
102,866	-				+1.2
102,866	-				-1.2
102,866	-				+0.0
102,866	-				-0.2
102,866	-				-0.9
102,866	-				-0.1
102,983	-		MPMX19_06335	0.14	-0.5
102,983	-		MPMX19_06335	0.14	+0.2
103,204	+		MPMX19_06335	0.23	+0.2
103,204	+		MPMX19_06335	0.23	-0.5
103,204	+		MPMX19_06335	0.23	-0.1
103,204	+		MPMX19_06335	0.23	+1.2
103,204	+		MPMX19_06335	0.23	+0.2
103,205	-		MPMX19_06335	0.23	-0.0
103,205	-		MPMX19_06335	0.23	-1.1
103,205	-		MPMX19_06335	0.23	-1.0
103,205	-		MPMX19_06335	0.23	-0.2
103,255	+		MPMX19_06335	0.25	-0.3
103,255	+		MPMX19_06335	0.25	+0.1
103,255	+		MPMX19_06335	0.25	+1.1
103,256	-		MPMX19_06335	0.25	+0.2
103,256	-		MPMX19_06335	0.25	-0.0
103,256	-		MPMX19_06335	0.25	-1.1
103,256	-		MPMX19_06335	0.25	+0.7
103,312	+		MPMX19_06335	0.27	+0.1
103,312	+		MPMX19_06335	0.27	-1.6
103,312	+		MPMX19_06335	0.27	-0.3
103,312	+		MPMX19_06335	0.27	-0.3
103,312	+		MPMX19_06335	0.27	-0.1
103,312	+		MPMX19_06335	0.27	-1.2
103,312	+		MPMX19_06335	0.27	+0.0
103,312	+		MPMX19_06335	0.27	-0.2
103,312	+		MPMX19_06335	0.27	-1.6
103,313	-		MPMX19_06335	0.27	+0.7
103,313	-		MPMX19_06335	0.27	-1.1
103,313	-		MPMX19_06335	0.27	-0.8
103,313	-		MPMX19_06335	0.27	+2.0
103,313	-		MPMX19_06335	0.27	+0.9
103,313	-		MPMX19_06335	0.27	-0.4
103,313	-		MPMX19_06335	0.27	-2.6
103,313	-		MPMX19_06335	0.27	-0.6
103,313	-		MPMX19_06335	0.27	-1.2
103,313	-		MPMX19_06335	0.27	-0.0
103,313	-		MPMX19_06335	0.27	-0.9
103,313	-		MPMX19_06335	0.27	-0.1
103,364	+		MPMX19_06335	0.29	+0.4
103,364	+		MPMX19_06335	0.29	+0.4
103,365	-		MPMX19_06335	0.29	+1.2
103,365	-		MPMX19_06335	0.29	-0.1
103,381	+		MPMX19_06335	0.30	+1.1
103,381	+		MPMX19_06335	0.30	-0.8
103,381	+		MPMX19_06335	0.30	-0.3
103,381	+		MPMX19_06335	0.30	-0.8
103,381	+		MPMX19_06335	0.30	-0.3
103,381	+		MPMX19_06335	0.30	-0.2
103,381	+		MPMX19_06335	0.30	+0.1
103,381	+		MPMX19_06335	0.30	-0.8
103,382	-		MPMX19_06335	0.30	-0.5
103,382	-		MPMX19_06335	0.30	-0.9
103,382	-		MPMX19_06335	0.30	-0.8
103,382	-		MPMX19_06335	0.30	-1.3
103,382	-		MPMX19_06335	0.30	-1.3
103,382	-		MPMX19_06335	0.30	-0.3
103,382	-		MPMX19_06335	0.30	-1.3
103,382	-		MPMX19_06335	0.30	-1.4