Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06142 and MPMX19_06143 are separated by 101 nucleotides MPMX19_06143 and MPMX19_06144 are separated by 86 nucleotides MPMX19_06144 and MPMX19_06145 are separated by 12 nucleotides
MPMX19_06142: MPMX19_06142 - putative ribonucleotide transport ATP-binding protein mkl, at 329,857 to 330,630
_06142
MPMX19_06143: MPMX19_06143 - Endonuclease III, at 330,732 to 331,412
_06143
MPMX19_06144: MPMX19_06144 - hypothetical protein, at 331,499 to 331,729
_06144
MPMX19_06145: MPMX19_06145 - hypothetical protein, at 331,742 to 332,728
_06145
Position (kb) 331
332 Strain fitness (log2 ratio) -2
-1
0
1 at 330.505 kb on + strand, within MPMX19_06142 at 330.505 kb on + strand, within MPMX19_06142 at 330.505 kb on + strand, within MPMX19_06142 at 330.506 kb on - strand, within MPMX19_06142 at 330.506 kb on - strand, within MPMX19_06142 at 330.565 kb on + strand at 330.565 kb on + strand at 330.566 kb on - strand at 330.628 kb on + strand at 330.849 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.284 kb on + strand, within MPMX19_06143 at 331.284 kb on + strand, within MPMX19_06143 at 331.284 kb on + strand, within MPMX19_06143 at 331.459 kb on + strand at 331.459 kb on + strand at 331.459 kb on + strand at 331.460 kb on - strand at 331.460 kb on - strand at 331.460 kb on - strand at 331.508 kb on + strand at 331.508 kb on + strand at 331.509 kb on - strand at 331.509 kb on - strand at 331.509 kb on - strand at 331.509 kb on - strand at 331.509 kb on - strand at 331.568 kb on + strand, within MPMX19_06144 at 331.569 kb on - strand, within MPMX19_06144 at 331.569 kb on - strand, within MPMX19_06144 at 331.569 kb on - strand, within MPMX19_06144
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 330,505 + MPMX19_06142 0.84 +0.6 330,505 + MPMX19_06142 0.84 -0.6 330,505 + MPMX19_06142 0.84 +0.1 330,506 - MPMX19_06142 0.84 -0.7 330,506 - MPMX19_06142 0.84 +1.0 330,565 + -0.4 330,565 + -0.4 330,566 - -0.1 330,628 + -0.0 330,849 + MPMX19_06143 0.17 -0.3 331,221 + MPMX19_06143 0.72 -0.9 331,221 + MPMX19_06143 0.72 +0.2 331,221 + MPMX19_06143 0.72 -1.5 331,221 + MPMX19_06143 0.72 +0.4 331,221 + MPMX19_06143 0.72 +0.0 331,221 + MPMX19_06143 0.72 -1.1 331,222 - MPMX19_06143 0.72 -1.1 331,222 - MPMX19_06143 0.72 -0.1 331,222 - MPMX19_06143 0.72 -1.4 331,222 - MPMX19_06143 0.72 -0.4 331,222 - MPMX19_06143 0.72 -1.1 331,222 - MPMX19_06143 0.72 -0.5 331,222 - MPMX19_06143 0.72 -0.6 331,222 - MPMX19_06143 0.72 -0.5 331,222 - MPMX19_06143 0.72 -0.1 331,222 - MPMX19_06143 0.72 -1.6 331,222 - MPMX19_06143 0.72 -1.4 331,222 - MPMX19_06143 0.72 -0.2 331,222 - MPMX19_06143 0.72 +0.3 331,222 - MPMX19_06143 0.72 -0.8 331,222 - MPMX19_06143 0.72 +0.9 331,222 - MPMX19_06143 0.72 -0.0 331,222 - MPMX19_06143 0.72 +0.1 331,284 + MPMX19_06143 0.81 -0.4 331,284 + MPMX19_06143 0.81 -2.1 331,284 + MPMX19_06143 0.81 -0.1 331,459 + -0.7 331,459 + +0.5 331,459 + -0.4 331,460 - -1.6 331,460 - -0.6 331,460 - +0.3 331,508 + -0.3 331,508 + -1.4 331,509 - +0.2 331,509 - -1.1 331,509 - +0.2 331,509 - +0.3 331,509 - +0.0 331,568 + MPMX19_06144 0.30 -0.5 331,569 - MPMX19_06144 0.30 -0.8 331,569 - MPMX19_06144 0.30 +0.5 331,569 - MPMX19_06144 0.30 +0.6
Or see this region's nucleotide sequence