Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05942

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
85,634	+		MPMX19_05941	0.26	+1.0
85,635	-		MPMX19_05941	0.26	-1.3
86,078	+		MPMX19_05941	0.66	+0.5
86,078	+		MPMX19_05941	0.66	-0.8
86,078	+		MPMX19_05941	0.66	-1.7
86,079	-		MPMX19_05941	0.67	+1.2
86,079	-		MPMX19_05941	0.67	+0.1
86,079	-		MPMX19_05941	0.67	-1.3
86,079	-		MPMX19_05941	0.67	+1.6
86,213	+		MPMX19_05941	0.79	-1.1
86,213	+		MPMX19_05941	0.79	+0.2
86,213	+		MPMX19_05941	0.79	-0.9
86,213	+		MPMX19_05941	0.79	-0.7
86,213	+		MPMX19_05941	0.79	-0.4
86,213	+		MPMX19_05941	0.79	-0.1
86,213	+		MPMX19_05941	0.79	-0.4
86,213	+		MPMX19_05941	0.79	+0.5
86,213	+		MPMX19_05941	0.79	-0.0
86,213	+		MPMX19_05941	0.79	-1.0
86,213	+		MPMX19_05941	0.79	-0.6
86,214	-		MPMX19_05941	0.79	+1.6
86,214	-		MPMX19_05941	0.79	+0.6
86,214	-		MPMX19_05941	0.79	-0.4
86,214	-		MPMX19_05941	0.79	+0.9
86,214	-		MPMX19_05941	0.79	+0.9
86,214	-		MPMX19_05941	0.79	+0.2
86,214	-		MPMX19_05941	0.79	-0.1
86,214	-		MPMX19_05941	0.79	-0.0
86,214	-		MPMX19_05941	0.79	-1.1
86,214	-		MPMX19_05941	0.79	-0.7
86,214	-		MPMX19_05941	0.79	+0.8
86,214	-		MPMX19_05941	0.79	-1.7
86,214	-		MPMX19_05941	0.79	+0.5
86,492	+				-1.3
86,492	+				+0.0
86,492	+				-1.3
86,492	+				-0.7
86,492	+				-0.6
86,493	-				-2.1
86,493	-				+0.6
86,493	-				+0.9
86,493	-				-1.9
86,493	-				-1.4
86,493	-				-0.6
86,528	-				-1.1
86,589	+				-0.9
86,589	+				-0.5
86,589	+				-0.4
86,589	+				-0.2
86,589	+				-0.0
86,589	+				-1.3
86,589	+				-0.6
86,590	-				-0.5
86,590	-				-1.0
86,629	+				+0.6
86,629	+				+1.2
86,629	+				-1.1
86,629	+				-0.6
86,630	-				-0.1
86,630	-				-0.3
86,630	-				-1.0
86,630	-				-0.8
86,720	-				-0.8
86,755	+				+0.1
86,755	+				+1.2
86,755	+				+1.2
86,755	+				-0.5
86,756	-				-1.8
86,756	-				-0.5
86,756	-				-1.7
86,756	-				-0.6
86,756	-				-0.9
86,756	-				-1.1
86,756	-				+0.9
86,756	-				-2.1
86,756	-				-0.0
86,756	-				+1.0
86,756	-				-0.5
86,788	+		MPMX19_05942	0.11	-2.6
86,788	+		MPMX19_05942	0.11	+0.0
86,788	+		MPMX19_05942	0.11	-0.1
86,788	+		MPMX19_05942	0.11	-1.0
86,788	+		MPMX19_05942	0.11	+0.5
86,788	+		MPMX19_05942	0.11	-0.8
86,789	-		MPMX19_05942	0.12	-1.1
86,789	-		MPMX19_05942	0.12	-0.6
86,789	-		MPMX19_05942	0.12	+1.1
86,839	+		MPMX19_05942	0.15	+0.1
86,839	+		MPMX19_05942	0.15	-0.9
86,839	+		MPMX19_05942	0.15	-1.0
86,839	+		MPMX19_05942	0.15	-1.0
86,839	+		MPMX19_05942	0.15	-0.3
86,839	+		MPMX19_05942	0.15	-0.3
86,839	+		MPMX19_05942	0.15	+0.9
86,839	+		MPMX19_05942	0.15	-0.3
86,840	-		MPMX19_05942	0.15	-0.7
86,840	-		MPMX19_05942	0.15	+0.4
86,977	+		MPMX19_05942	0.25	-1.0
86,977	+		MPMX19_05942	0.25	-0.0
86,978	-		MPMX19_05942	0.25	-1.1
86,978	-		MPMX19_05942	0.25	-0.1
87,286	+		MPMX19_05942	0.47	-1.0
87,286	+		MPMX19_05942	0.47	-1.0
87,286	+		MPMX19_05942	0.47	+0.9
87,286	+		MPMX19_05942	0.47	+0.4
87,286	+		MPMX19_05942	0.47	-0.6
87,286	+		MPMX19_05942	0.47	+0.3
87,286	+		MPMX19_05942	0.47	+0.2
87,286	+		MPMX19_05942	0.47	+0.2
87,286	+		MPMX19_05942	0.47	-2.4
87,286	+		MPMX19_05942	0.47	-2.6
87,286	+		MPMX19_05942	0.47	+0.3
87,286	+		MPMX19_05942	0.47	-0.0
87,286	+		MPMX19_05942	0.47	-0.7
87,286	+		MPMX19_05942	0.47	-1.1
87,286	+		MPMX19_05942	0.47	-2.1
87,286	+		MPMX19_05942	0.47	+1.4
87,286	+		MPMX19_05942	0.47	+0.2
87,286	+		MPMX19_05942	0.47	-0.3
87,286	+		MPMX19_05942	0.47	+0.2
87,286	+		MPMX19_05942	0.47	+0.0
87,286	+		MPMX19_05942	0.47	-1.1
87,286	+		MPMX19_05942	0.47	-1.1
87,286	+		MPMX19_05942	0.47	-0.8
87,287	-		MPMX19_05942	0.47	-0.7
87,287	-		MPMX19_05942	0.47	+0.0
87,287	-		MPMX19_05942	0.47	-0.9
87,287	-		MPMX19_05942	0.47	-1.3
87,287	-		MPMX19_05942	0.47	-2.0
87,287	-		MPMX19_05942	0.47	-0.5
87,287	-		MPMX19_05942	0.47	-0.8
87,287	-		MPMX19_05942	0.47	-0.3
87,287	-		MPMX19_05942	0.47	-0.8
87,287	-		MPMX19_05942	0.47	+0.7
87,287	-		MPMX19_05942	0.47	-0.5
87,287	-		MPMX19_05942	0.47	-0.8
87,287	-		MPMX19_05942	0.47	+0.2
87,289	+		MPMX19_05942	0.47	-1.2
87,289	+		MPMX19_05942	0.47	-0.7
87,289	+		MPMX19_05942	0.47	-1.7
87,289	+		MPMX19_05942	0.47	-1.1
87,289	+		MPMX19_05942	0.47	-1.1
87,289	+		MPMX19_05942	0.47	-1.5
87,289	+		MPMX19_05942	0.47	-0.4
87,289	+		MPMX19_05942	0.47	-1.1
87,289	+		MPMX19_05942	0.47	-0.3
87,289	+		MPMX19_05942	0.47	+0.2
87,290	-		MPMX19_05942	0.47	-1.0
87,290	-		MPMX19_05942	0.47	+0.1
87,290	-		MPMX19_05942	0.47	+0.0
87,290	-		MPMX19_05942	0.47	-1.0
87,290	-		MPMX19_05942	0.47	-0.4
87,290	-		MPMX19_05942	0.47	-0.2
87,290	-		MPMX19_05942	0.47	-1.3
87,290	-		MPMX19_05942	0.47	-1.9
87,290	-		MPMX19_05942	0.47	-1.1
87,290	-		MPMX19_05942	0.47	-1.5
87,290	-		MPMX19_05942	0.47	-1.1
87,290	-		MPMX19_05942	0.47	-1.8
87,290	-		MPMX19_05942	0.47	-0.4
87,290	-		MPMX19_05942	0.47	-1.1
87,290	-		MPMX19_05942	0.47	+0.0
87,343	+		MPMX19_05942	0.51	-0.1
87,343	+		MPMX19_05942	0.51	+1.0
87,343	+		MPMX19_05942	0.51	+1.8
87,343	+		MPMX19_05942	0.51	-0.6
87,343	+		MPMX19_05942	0.51	-0.7
87,344	-		MPMX19_05942	0.51	-0.9
87,344	-		MPMX19_05942	0.51	-0.4
87,344	-		MPMX19_05942	0.51	+0.1
87,344	-		MPMX19_05942	0.51	-1.5
87,344	-		MPMX19_05942	0.51	-0.8
87,344	-		MPMX19_05942	0.51	+1.3
87,344	-		MPMX19_05942	0.51	-0.2
87,526	+		MPMX19_05942	0.64	-0.7
87,526	+		MPMX19_05942	0.64	-1.0
87,526	+		MPMX19_05942	0.64	-0.4
87,526	+		MPMX19_05942	0.64	-1.3
87,526	+		MPMX19_05942	0.64	-0.1
87,526	+		MPMX19_05942	0.64	+0.2
87,526	+		MPMX19_05942	0.64	+1.4
87,527	-		MPMX19_05942	0.64	-0.1
87,527	-		MPMX19_05942	0.64	-1.2
87,527	-		MPMX19_05942	0.64	-0.1
87,527	-		MPMX19_05942	0.64	-0.3
87,527	-		MPMX19_05942	0.64	-1.9
87,718	+		MPMX19_05942	0.78	-0.5
87,742	+		MPMX19_05942	0.80	-0.4
87,742	+		MPMX19_05942	0.80	-0.3
87,743	-		MPMX19_05942	0.80	-1.1
87,743	-		MPMX19_05942	0.80	+0.0
87,743	-		MPMX19_05942	0.80	+1.2
87,743	-		MPMX19_05942	0.80	-0.6
87,877	+		MPMX19_05942	0.90	-0.8
87,877	+		MPMX19_05942	0.90	+0.2
87,877	+		MPMX19_05942	0.90	+0.5
87,877	+		MPMX19_05942	0.90	-1.1
87,877	+		MPMX19_05942	0.90	-2.1
87,877	+		MPMX19_05942	0.90	-0.5
87,878	-		MPMX19_05942	0.90	-1.1
87,878	-		MPMX19_05942	0.90	+2.2
87,878	-		MPMX19_05942	0.90	-0.0
87,878	-		MPMX19_05942	0.90	-1.7
87,910	+				-2.6
87,910	+				+1.0
87,910	+				+0.2
87,910	+				-1.5
87,911	-				+0.8
87,911	-				-1.5
87,911	-				+0.2
87,917	-				-0.7
87,928	+				+0.5
87,928	+				-0.1
87,928	+				-0.1
87,928	+				-1.1
87,928	+				+1.2
87,928	+				-1.3
88,060	+				-0.7
88,060	+				-0.2
88,061	-				-1.1
88,061	-				-2.3
88,061	-				-1.0
88,061	-				-0.8
88,184	-				-0.9
88,184	-				+1.8
88,184	-				-1.7
88,192	+				-0.8
88,192	+				+0.8
88,192	+				+0.4
88,192	+				-0.5
88,192	+				-0.1
88,192	+				+0.6
88,193	-				+3.2
88,193	-				-2.1
88,193	-				-0.6
88,193	-				-1.9
88,198	+				-0.1
88,198	+				-1.4
88,198	+				-1.3
88,198	+				-0.4
88,198	+				+0.2
88,198	+				-1.6
88,199	-				-0.8
88,199	-				-1.7
88,199	-				+0.3
88,199	-				-1.4
88,217	+				-1.0
88,217	+				-1.0
88,217	+				-0.6
88,218	-				-0.1
88,228	+				-0.8
88,229	-				-1.4
88,255	-				-0.8
88,270	+		MPMX19_05943	0.10	-1.1
88,271	-		MPMX19_05943	0.10	+0.4
88,294	+		MPMX19_05943	0.13	-0.4
88,294	+		MPMX19_05943	0.13	-0.4
88,294	+		MPMX19_05943	0.13	-1.3
88,294	+		MPMX19_05943	0.13	-0.8
88,294	+		MPMX19_05943	0.13	-0.8
88,294	+		MPMX19_05943	0.13	-0.6
88,294	+		MPMX19_05943	0.13	-0.8
88,294	+		MPMX19_05943	0.13	+0.7
88,294	+		MPMX19_05943	0.13	-0.4
88,294	+		MPMX19_05943	0.13	-0.9
88,294	+		MPMX19_05943	0.13	-0.7
88,294	+		MPMX19_05943	0.13	-0.8
88,294	+		MPMX19_05943	0.13	-0.4
88,294	+		MPMX19_05943	0.13	-1.5
88,294	+		MPMX19_05943	0.13	-0.1
88,294	+		MPMX19_05943	0.13	-0.6
88,294	+		MPMX19_05943	0.13	-0.6
88,295	-		MPMX19_05943	0.13	+0.7
88,295	-		MPMX19_05943	0.13	-0.1
88,295	-		MPMX19_05943	0.13	-2.0
88,295	-		MPMX19_05943	0.13	-0.3
88,295	-		MPMX19_05943	0.13	-3.5
88,295	-		MPMX19_05943	0.13	+0.5
88,295	-		MPMX19_05943	0.13	-2.0
88,295	-		MPMX19_05943	0.13	-1.1
88,295	-		MPMX19_05943	0.13	-0.2
88,295	-		MPMX19_05943	0.13	+0.6
88,295	-		MPMX19_05943	0.13	-1.1
88,295	-		MPMX19_05943	0.13	+0.0
88,295	-		MPMX19_05943	0.13	-0.4
88,295	-		MPMX19_05943	0.13	-0.9
88,295	-		MPMX19_05943	0.13	-1.5
88,295	-		MPMX19_05943	0.13	-0.9
88,295	-		MPMX19_05943	0.13	-0.2
88,779	+		MPMX19_05943	0.69	+0.2
88,780	-		MPMX19_05943	0.69	-1.9
88,780	-		MPMX19_05943	0.69	+0.0