Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05773

Experiment: NL-CCM, start OD=0.3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_05771 and MPMX19_05772 overlap by 1 nucleotidesMPMX19_05772 and MPMX19_05773 are separated by 7 nucleotidesMPMX19_05773 and MPMX19_05774 are separated by 47 nucleotides MPMX19_05771: MPMX19_05771 - 1,2-phenylacetyl-CoA epoxidase, subunit B, at 494,546 to 494,833 _05771 MPMX19_05772: MPMX19_05772 - 1,2-phenylacetyl-CoA epoxidase, subunit C, at 494,833 to 495,597 _05772 MPMX19_05773: MPMX19_05773 - Putative 1,2-phenylacetyl-CoA epoxidase, subunit D, at 495,605 to 496,126 _05773 MPMX19_05774: MPMX19_05774 - 1,2-phenylacetyl-CoA epoxidase, subunit E, at 496,174 to 497,253 _05774 Position (kb) 495 496 497Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 494.672 kb on + strand, within MPMX19_05771at 494.672 kb on + strand, within MPMX19_05771at 494.672 kb on + strand, within MPMX19_05771at 494.672 kb on + strand, within MPMX19_05771at 494.672 kb on + strand, within MPMX19_05771at 494.672 kb on + strand, within MPMX19_05771at 494.672 kb on + strand, within MPMX19_05771at 494.673 kb on - strand, within MPMX19_05771at 494.673 kb on - strand, within MPMX19_05771at 494.673 kb on - strand, within MPMX19_05771at 494.673 kb on - strand, within MPMX19_05771at 494.673 kb on - strand, within MPMX19_05771at 494.673 kb on - strand, within MPMX19_05771at 494.673 kb on - strand, within MPMX19_05771at 494.673 kb on - strand, within MPMX19_05771at 494.673 kb on - strand, within MPMX19_05771at 494.673 kb on - strand, within MPMX19_05771at 494.674 kb on + strand, within MPMX19_05771at 494.675 kb on - strand, within MPMX19_05771at 494.783 kb on + strand, within MPMX19_05771at 494.784 kb on - strand, within MPMX19_05771at 494.784 kb on - strand, within MPMX19_05771at 494.784 kb on - strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.801 kb on + strand, within MPMX19_05771at 494.802 kb on - strand, within MPMX19_05771at 494.802 kb on - strand, within MPMX19_05771at 494.802 kb on - strand, within MPMX19_05771at 494.802 kb on - strand, within MPMX19_05771at 494.802 kb on - strand, within MPMX19_05771at 494.802 kb on - strand, within MPMX19_05771at 494.827 kb on + strandat 494.827 kb on + strandat 494.827 kb on + strandat 494.827 kb on + strandat 494.827 kb on + strandat 494.827 kb on + strandat 494.828 kb on - strandat 494.828 kb on - strandat 494.828 kb on - strandat 494.828 kb on - strandat 494.828 kb on - strandat 494.866 kb on + strandat 494.867 kb on - strandat 495.010 kb on + strand, within MPMX19_05772at 495.010 kb on + strand, within MPMX19_05772at 495.010 kb on + strand, within MPMX19_05772at 495.010 kb on + strand, within MPMX19_05772at 495.010 kb on + strand, within MPMX19_05772at 495.010 kb on + strand, within MPMX19_05772at 495.011 kb on - strand, within MPMX19_05772at 495.011 kb on - strand, within MPMX19_05772at 495.011 kb on - strand, within MPMX19_05772at 495.011 kb on - strand, within MPMX19_05772at 495.011 kb on - strand, within MPMX19_05772at 495.172 kb on + strand, within MPMX19_05772at 495.172 kb on + strand, within MPMX19_05772at 495.172 kb on + strand, within MPMX19_05772at 495.172 kb on + strand, within MPMX19_05772at 495.173 kb on - strand, within MPMX19_05772at 495.173 kb on - strand, within MPMX19_05772at 495.244 kb on + strand, within MPMX19_05772at 495.244 kb on + strand, within MPMX19_05772at 495.244 kb on + strand, within MPMX19_05772at 495.245 kb on - strand, within MPMX19_05772at 495.245 kb on - strand, within MPMX19_05772at 495.245 kb on - strand, within MPMX19_05772at 495.343 kb on + strand, within MPMX19_05772at 495.343 kb on + strand, within MPMX19_05772at 495.344 kb on - strand, within MPMX19_05772at 495.344 kb on - strand, within MPMX19_05772at 495.541 kb on + strandat 495.541 kb on + strandat 495.541 kb on + strandat 495.542 kb on - strandat 495.542 kb on - strandat 495.578 kb on - strandat 495.791 kb on + strand, within MPMX19_05773at 495.791 kb on + strand, within MPMX19_05773at 495.791 kb on + strand, within MPMX19_05773at 495.791 kb on + strand, within MPMX19_05773at 495.791 kb on + strand, within MPMX19_05773at 495.791 kb on + strand, within MPMX19_05773at 495.792 kb on - strand, within MPMX19_05773at 495.792 kb on - strand, within MPMX19_05773at 495.792 kb on - strand, within MPMX19_05773at 495.792 kb on - strand, within MPMX19_05773at 495.792 kb on - strand, within MPMX19_05773at 495.792 kb on - strand, within MPMX19_05773at 495.792 kb on - strand, within MPMX19_05773at 496.082 kb on + strandat 496.159 kb on - strandat 496.159 kb on - strandat 496.300 kb on + strand, within MPMX19_05774at 496.300 kb on + strand, within MPMX19_05774at 496.300 kb on + strand, within MPMX19_05774at 496.300 kb on + strand, within MPMX19_05774at 496.300 kb on + strand, within MPMX19_05774at 496.300 kb on + strand, within MPMX19_05774at 496.300 kb on + strand, within MPMX19_05774at 496.301 kb on - strand, within MPMX19_05774at 496.301 kb on - strand, within MPMX19_05774at 496.301 kb on - strand, within MPMX19_05774at 496.301 kb on - strand, within MPMX19_05774at 496.301 kb on - strand, within MPMX19_05774at 496.301 kb on - strand, within MPMX19_05774at 496.301 kb on - strand, within MPMX19_05774at 496.301 kb on - strand, within MPMX19_05774at 496.301 kb on - strand, within MPMX19_05774at 496.348 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.489 kb on + strand, within MPMX19_05774at 496.490 kb on - strand, within MPMX19_05774at 496.490 kb on - strand, within MPMX19_05774at 496.490 kb on - strand, within MPMX19_05774at 496.490 kb on - strand, within MPMX19_05774at 496.490 kb on - strand, within MPMX19_05774at 496.490 kb on - strand, within MPMX19_05774at 496.490 kb on - strand, within MPMX19_05774at 496.490 kb on - strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.522 kb on + strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.523 kb on - strand, within MPMX19_05774at 496.619 kb on - strand, within MPMX19_05774at 496.681 kb on + strand, within MPMX19_05774at 496.681 kb on + strand, within MPMX19_05774at 496.681 kb on + strand, within MPMX19_05774at 496.681 kb on + strand, within MPMX19_05774at 496.681 kb on + strand, within MPMX19_05774at 496.681 kb on + strand, within MPMX19_05774at 496.681 kb on + strand, within MPMX19_05774at 496.682 kb on - strand, within MPMX19_05774at 496.682 kb on - strand, within MPMX19_05774at 496.682 kb on - strand, within MPMX19_05774at 496.682 kb on - strand, within MPMX19_05774at 496.683 kb on + strand, within MPMX19_05774at 496.684 kb on - strand, within MPMX19_05774at 496.684 kb on - strand, within MPMX19_05774at 496.684 kb on - strand, within MPMX19_05774at 496.684 kb on - strand, within MPMX19_05774at 497.026 kb on + strand, within MPMX19_05774at 497.026 kb on + strand, within MPMX19_05774at 497.026 kb on + strand, within MPMX19_05774at 497.026 kb on + strand, within MPMX19_05774at 497.026 kb on + strand, within MPMX19_05774at 497.026 kb on + strand, within MPMX19_05774at 497.026 kb on + strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.027 kb on - strand, within MPMX19_05774at 497.080 kb on + strand, within MPMX19_05774at 497.081 kb on - strand, within MPMX19_05774

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3
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494,672 + MPMX19_05771 0.44 -0.0
494,672 + MPMX19_05771 0.44 -0.1
494,672 + MPMX19_05771 0.44 -0.7
494,672 + MPMX19_05771 0.44 +0.4
494,672 + MPMX19_05771 0.44 -1.4
494,672 + MPMX19_05771 0.44 -1.5
494,672 + MPMX19_05771 0.44 +0.4
494,673 - MPMX19_05771 0.44 -0.1
494,673 - MPMX19_05771 0.44 -1.0
494,673 - MPMX19_05771 0.44 -1.1
494,673 - MPMX19_05771 0.44 -0.8
494,673 - MPMX19_05771 0.44 +0.3
494,673 - MPMX19_05771 0.44 -0.6
494,673 - MPMX19_05771 0.44 +0.1
494,673 - MPMX19_05771 0.44 +0.8
494,673 - MPMX19_05771 0.44 -0.3
494,673 - MPMX19_05771 0.44 +0.2
494,674 + MPMX19_05771 0.44 -2.3
494,675 - MPMX19_05771 0.45 -0.8
494,783 + MPMX19_05771 0.82 +0.0
494,784 - MPMX19_05771 0.83 -0.6
494,784 - MPMX19_05771 0.83 +0.2
494,784 - MPMX19_05771 0.83 -0.1
494,801 + MPMX19_05771 0.89 +1.4
494,801 + MPMX19_05771 0.89 -0.4
494,801 + MPMX19_05771 0.89 -1.8
494,801 + MPMX19_05771 0.89 +0.4
494,801 + MPMX19_05771 0.89 -0.8
494,801 + MPMX19_05771 0.89 +0.0
494,801 + MPMX19_05771 0.89 -0.8
494,801 + MPMX19_05771 0.89 -0.3
494,801 + MPMX19_05771 0.89 -0.7
494,801 + MPMX19_05771 0.89 +1.2
494,801 + MPMX19_05771 0.89 -2.1
494,801 + MPMX19_05771 0.89 -0.2
494,801 + MPMX19_05771 0.89 -1.4
494,801 + MPMX19_05771 0.89 +0.4
494,801 + MPMX19_05771 0.89 +0.2
494,802 - MPMX19_05771 0.89 -0.1
494,802 - MPMX19_05771 0.89 -0.5
494,802 - MPMX19_05771 0.89 -0.3
494,802 - MPMX19_05771 0.89 -0.3
494,802 - MPMX19_05771 0.89 -0.5
494,802 - MPMX19_05771 0.89 -0.8
494,827 + -1.6
494,827 + -1.3
494,827 + -0.5
494,827 + +0.2
494,827 + -0.6
494,827 + -0.1
494,828 - -1.4
494,828 - -0.8
494,828 - +0.3
494,828 - +0.0
494,828 - +0.0
494,866 + -0.6
494,867 - -1.1
495,010 + MPMX19_05772 0.23 +1.0
495,010 + MPMX19_05772 0.23 +0.4
495,010 + MPMX19_05772 0.23 +0.2
495,010 + MPMX19_05772 0.23 -1.2
495,010 + MPMX19_05772 0.23 +0.9
495,010 + MPMX19_05772 0.23 -2.3
495,011 - MPMX19_05772 0.23 -0.7
495,011 - MPMX19_05772 0.23 -0.6
495,011 - MPMX19_05772 0.23 -0.6
495,011 - MPMX19_05772 0.23 -0.6
495,011 - MPMX19_05772 0.23 +0.5
495,172 + MPMX19_05772 0.44 +0.8
495,172 + MPMX19_05772 0.44 +0.0
495,172 + MPMX19_05772 0.44 +0.2
495,172 + MPMX19_05772 0.44 -2.8
495,173 - MPMX19_05772 0.44 -0.7
495,173 - MPMX19_05772 0.44 -1.2
495,244 + MPMX19_05772 0.54 -0.1
495,244 + MPMX19_05772 0.54 -1.3
495,244 + MPMX19_05772 0.54 -1.7
495,245 - MPMX19_05772 0.54 -1.6
495,245 - MPMX19_05772 0.54 -1.9
495,245 - MPMX19_05772 0.54 -1.2
495,343 + MPMX19_05772 0.67 +0.0
495,343 + MPMX19_05772 0.67 -1.1
495,344 - MPMX19_05772 0.67 -0.2
495,344 - MPMX19_05772 0.67 -0.6
495,541 + -0.9
495,541 + -0.7
495,541 + -0.4
495,542 - -0.0
495,542 - -0.9
495,578 - -1.1
495,791 + MPMX19_05773 0.36 +0.4
495,791 + MPMX19_05773 0.36 -0.6
495,791 + MPMX19_05773 0.36 -0.6
495,791 + MPMX19_05773 0.36 -0.1
495,791 + MPMX19_05773 0.36 -0.9
495,791 + MPMX19_05773 0.36 +0.2
495,792 - MPMX19_05773 0.36 -0.3
495,792 - MPMX19_05773 0.36 +0.2
495,792 - MPMX19_05773 0.36 -1.0
495,792 - MPMX19_05773 0.36 +0.2
495,792 - MPMX19_05773 0.36 -0.1
495,792 - MPMX19_05773 0.36 +1.2
495,792 - MPMX19_05773 0.36 -0.4
496,082 + -2.0
496,159 - -1.9
496,159 - +0.3
496,300 + MPMX19_05774 0.12 -0.1
496,300 + MPMX19_05774 0.12 +0.4
496,300 + MPMX19_05774 0.12 +0.4
496,300 + MPMX19_05774 0.12 +0.7
496,300 + MPMX19_05774 0.12 +0.6
496,300 + MPMX19_05774 0.12 -0.3
496,300 + MPMX19_05774 0.12 -1.1
496,301 - MPMX19_05774 0.12 -0.1
496,301 - MPMX19_05774 0.12 -0.1
496,301 - MPMX19_05774 0.12 -0.4
496,301 - MPMX19_05774 0.12 -1.5
496,301 - MPMX19_05774 0.12 -0.4
496,301 - MPMX19_05774 0.12 -0.8
496,301 - MPMX19_05774 0.12 -1.3
496,301 - MPMX19_05774 0.12 -1.0
496,301 - MPMX19_05774 0.12 -1.6
496,348 + MPMX19_05774 0.16 -2.2
496,489 + MPMX19_05774 0.29 -1.1
496,489 + MPMX19_05774 0.29 -1.2
496,489 + MPMX19_05774 0.29 -1.2
496,489 + MPMX19_05774 0.29 -1.0
496,489 + MPMX19_05774 0.29 -0.6
496,489 + MPMX19_05774 0.29 +1.0
496,489 + MPMX19_05774 0.29 +0.7
496,489 + MPMX19_05774 0.29 +1.0
496,489 + MPMX19_05774 0.29 -0.9
496,489 + MPMX19_05774 0.29 +0.3
496,489 + MPMX19_05774 0.29 -1.0
496,489 + MPMX19_05774 0.29 +0.0
496,489 + MPMX19_05774 0.29 -0.6
496,489 + MPMX19_05774 0.29 +2.0
496,489 + MPMX19_05774 0.29 -0.1
496,490 - MPMX19_05774 0.29 -0.4
496,490 - MPMX19_05774 0.29 +0.0
496,490 - MPMX19_05774 0.29 +0.0
496,490 - MPMX19_05774 0.29 -0.2
496,490 - MPMX19_05774 0.29 +1.0
496,490 - MPMX19_05774 0.29 +0.4
496,490 - MPMX19_05774 0.29 -1.0
496,490 - MPMX19_05774 0.29 +0.1
496,522 + MPMX19_05774 0.32 -0.6
496,522 + MPMX19_05774 0.32 -1.7
496,522 + MPMX19_05774 0.32 +3.0
496,522 + MPMX19_05774 0.32 -0.6
496,522 + MPMX19_05774 0.32 -0.9
496,522 + MPMX19_05774 0.32 -1.3
496,522 + MPMX19_05774 0.32 -1.7
496,522 + MPMX19_05774 0.32 -1.0
496,522 + MPMX19_05774 0.32 +0.8
496,522 + MPMX19_05774 0.32 +0.4
496,522 + MPMX19_05774 0.32 -1.0
496,522 + MPMX19_05774 0.32 -1.0
496,522 + MPMX19_05774 0.32 -1.1
496,522 + MPMX19_05774 0.32 +1.4
496,522 + MPMX19_05774 0.32 -1.3
496,522 + MPMX19_05774 0.32 -0.5
496,522 + MPMX19_05774 0.32 -1.0
496,522 + MPMX19_05774 0.32 -1.8
496,523 - MPMX19_05774 0.32 -1.1
496,523 - MPMX19_05774 0.32 -1.4
496,523 - MPMX19_05774 0.32 -2.4
496,523 - MPMX19_05774 0.32 +0.3
496,523 - MPMX19_05774 0.32 -0.2
496,523 - MPMX19_05774 0.32 -1.8
496,523 - MPMX19_05774 0.32 -1.6
496,523 - MPMX19_05774 0.32 -0.7
496,523 - MPMX19_05774 0.32 +0.4
496,523 - MPMX19_05774 0.32 -1.8
496,523 - MPMX19_05774 0.32 +0.4
496,619 - MPMX19_05774 0.41 -0.6
496,681 + MPMX19_05774 0.47 +0.4
496,681 + MPMX19_05774 0.47 +0.6
496,681 + MPMX19_05774 0.47 +0.4
496,681 + MPMX19_05774 0.47 -0.1
496,681 + MPMX19_05774 0.47 -1.4
496,681 + MPMX19_05774 0.47 +0.6
496,681 + MPMX19_05774 0.47 -0.1
496,682 - MPMX19_05774 0.47 -0.4
496,682 - MPMX19_05774 0.47 +0.8
496,682 - MPMX19_05774 0.47 +0.6
496,682 - MPMX19_05774 0.47 +0.4
496,683 + MPMX19_05774 0.47 -0.1
496,684 - MPMX19_05774 0.47 -1.0
496,684 - MPMX19_05774 0.47 -2.7
496,684 - MPMX19_05774 0.47 +0.4
496,684 - MPMX19_05774 0.47 +0.5
497,026 + MPMX19_05774 0.79 -0.6
497,026 + MPMX19_05774 0.79 -2.3
497,026 + MPMX19_05774 0.79 -0.1
497,026 + MPMX19_05774 0.79 +0.0
497,026 + MPMX19_05774 0.79 -2.6
497,026 + MPMX19_05774 0.79 +0.8
497,026 + MPMX19_05774 0.79 -1.6
497,027 - MPMX19_05774 0.79 -0.3
497,027 - MPMX19_05774 0.79 -0.8
497,027 - MPMX19_05774 0.79 +0.4
497,027 - MPMX19_05774 0.79 -0.6
497,027 - MPMX19_05774 0.79 -0.6
497,027 - MPMX19_05774 0.79 +0.3
497,027 - MPMX19_05774 0.79 -1.0
497,027 - MPMX19_05774 0.79 -1.2
497,027 - MPMX19_05774 0.79 -0.6
497,027 - MPMX19_05774 0.79 +0.0
497,027 - MPMX19_05774 0.79 +0.2
497,080 + MPMX19_05774 0.84 +0.2
497,081 - MPMX19_05774 0.84 -0.6

Or see this region's nucleotide sequence