Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05448

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
133,755	+		MPMX19_05444	0.87	-0.6
133,755	+		MPMX19_05444	0.87	-0.7
133,755	+		MPMX19_05444	0.87	-0.8
133,756	-		MPMX19_05444	0.87	-0.6
133,756	-		MPMX19_05444	0.87	-0.7
133,791	+				-0.7
133,791	+				-0.4
133,792	-				-3.2
133,792	-				-1.2
133,792	-				-0.5
133,792	-				-0.3
133,792	-				-0.5
133,792	-				+0.2
133,792	-				+0.4
133,792	-				-1.3
133,792	-				+1.1
133,792	-				-0.2
133,792	-				+0.7
133,868	+				-1.3
133,885	-				-0.5
133,954	+		MPMX19_05445	0.16	-0.1
133,954	+		MPMX19_05445	0.16	-0.8
133,954	+		MPMX19_05445	0.16	-1.7
133,962	+		MPMX19_05445	0.26	-0.8
133,962	+		MPMX19_05445	0.26	+0.7
133,962	+		MPMX19_05445	0.26	-1.1
134,099	-		MPMX19_05446	0.17	-0.9
134,202	+				-2.3
134,202	+				-1.4
134,202	+				-1.2
134,202	+				-0.9
134,202	+				-0.9
134,202	+				-1.6
134,202	+				+0.4
134,203	-				+0.9
134,303	+				+0.8
134,304	-				+1.0
134,315	-				-1.1
134,338	+				+0.1
134,352	-				-1.8
134,359	+				+0.8
134,360	-				-0.1
134,363	+				+1.5
134,374	+				-1.2
134,385	+				-0.2
134,385	+				+0.4
134,386	-				-1.2
134,446	-				-1.6
134,446	-				+0.3
134,473	+				-1.7
134,473	+				+0.1
134,484	+				-0.7
134,485	-				+0.5
134,512	+		MPMX19_05448	0.12	-1.1
134,512	+		MPMX19_05448	0.12	-0.7
134,512	+		MPMX19_05448	0.12	-0.2
134,595	+		MPMX19_05448	0.27	-0.9
134,595	+		MPMX19_05448	0.27	-1.9
134,595	+		MPMX19_05448	0.27	+0.7
134,698	+		MPMX19_05448	0.45	+0.2
134,716	+		MPMX19_05448	0.48	-0.5
134,717	-		MPMX19_05448	0.48	+0.1
134,762	+		MPMX19_05448	0.56	-0.2
134,762	+		MPMX19_05448	0.56	-2.7
134,762	+		MPMX19_05448	0.56	+0.4
134,762	+		MPMX19_05448	0.56	+0.1
134,763	-		MPMX19_05448	0.57	+0.1
134,763	-		MPMX19_05448	0.57	-1.1
134,763	-		MPMX19_05448	0.57	+0.1
134,992	-				+1.1
134,992	-				-0.9
134,997	+				+0.5
134,997	+				-1.0
134,997	+				-0.1
135,051	+				-1.3
135,137	-				-1.1
135,154	+				-1.4
135,155	-				-0.9
135,155	-				-0.8
135,155	-				-0.9
135,171	-				-1.5
135,191	+				-1.2
135,248	+				-0.6
135,248	+				-1.5
135,248	+				-2.1
135,248	+				+1.1
135,249	-				-0.5
135,249	-				-1.5
135,249	-				-1.7
135,298	+				+2.1
135,298	+				-0.3
135,298	+				-0.6
135,299	-				+1.4
135,299	-				-0.7
135,314	+				-1.2
135,315	-				-1.7
135,315	-				+0.8
135,315	-				+0.1
135,315	-				+0.2
135,443	-				-1.3
135,443	-				-1.2
135,500	-		MPMX19_05449	0.27	-0.5
135,545	+		MPMX19_05449	0.42	-1.7
135,594	+		MPMX19_05449	0.57	-0.2
135,594	+		MPMX19_05449	0.57	+0.0
135,594	+		MPMX19_05449	0.57	+0.1
135,596	+		MPMX19_05449	0.58	+0.9
135,597	-		MPMX19_05449	0.58	-0.3
135,597	-		MPMX19_05449	0.58	-0.7
135,675	+		MPMX19_05449	0.83	-0.3
135,675	+		MPMX19_05449	0.83	-1.2
135,675	+		MPMX19_05449	0.83	+0.1
135,676	-		MPMX19_05449	0.83	-1.8
135,676	-		MPMX19_05449	0.83	-0.7
135,710	+				-1.6
135,711	-				-1.3
135,711	-				+0.2
135,770	+				-1.1
135,770	+				+0.1
135,785	+				-1.9
135,818	+				-0.1
135,818	+				-0.1
135,835	+				-1.1
135,848	+				+0.3
135,849	-				-0.7
135,849	-				-1.3
135,849	-				-0.5
135,979	+				-0.3
135,979	+				-1.1
135,980	-				+0.0
135,980	-				-1.3
135,980	-				-0.9
135,980	-				-1.7