Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05420

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
109,289	+				-0.7
109,289	+				-0.7
109,290	-				-0.7
109,290	-				-2.3
109,290	-				-1.6
109,317	+				+0.9
109,347	+				-2.0
109,348	-				-0.9
109,354	+				-1.5
109,355	-				+0.3
109,355	-				-0.6
109,355	-				-0.2
109,355	-				-0.5
109,355	-				-1.5
109,415	+				-0.4
109,415	+				-0.5
109,444	+				+0.1
109,444	+				+0.5
109,445	-				+0.0
109,742	-		MPMX19_05420	0.19	-3.6
109,742	-		MPMX19_05420	0.19	-1.8
109,742	-		MPMX19_05420	0.19	+0.1
110,069	+		MPMX19_05420	0.55	-0.5
110,069	+		MPMX19_05420	0.55	-0.8
110,070	-		MPMX19_05420	0.55	-0.3
110,084	+		MPMX19_05420	0.57	-1.5
110,084	+		MPMX19_05420	0.57	-0.2
110,085	-		MPMX19_05420	0.57	-0.1
110,085	-		MPMX19_05420	0.57	-1.1
110,147	+		MPMX19_05420	0.64	-0.9
110,147	+		MPMX19_05420	0.64	-0.2
110,147	+		MPMX19_05420	0.64	+0.1
110,147	+		MPMX19_05420	0.64	-1.4
110,147	+		MPMX19_05420	0.64	-0.9
110,148	-		MPMX19_05420	0.64	-0.5
110,148	-		MPMX19_05420	0.64	-0.9
110,148	-		MPMX19_05420	0.64	+0.2
110,150	-		MPMX19_05420	0.64	-0.2
110,183	+		MPMX19_05420	0.68	-1.5
110,183	+		MPMX19_05420	0.68	+0.3
110,183	+		MPMX19_05420	0.68	+1.0
110,183	+		MPMX19_05420	0.68	-0.1
110,183	+		MPMX19_05420	0.68	-0.7
110,183	+		MPMX19_05420	0.68	-1.1
110,183	+		MPMX19_05420	0.68	-0.5
110,183	+		MPMX19_05420	0.68	-1.6
110,184	-		MPMX19_05420	0.68	+0.1
110,184	-		MPMX19_05420	0.68	-0.9
110,184	-		MPMX19_05420	0.68	-0.2
110,184	-		MPMX19_05420	0.68	-0.1
110,184	-		MPMX19_05420	0.68	+0.1
110,367	+		MPMX19_05420	0.88	-0.1
110,367	+		MPMX19_05420	0.88	-0.5
110,367	+		MPMX19_05420	0.88	-1.1
110,367	+		MPMX19_05420	0.88	+0.8
110,367	+		MPMX19_05420	0.88	-0.2
110,368	-		MPMX19_05420	0.88	-0.7
110,368	-		MPMX19_05420	0.88	-0.1
110,368	-		MPMX19_05420	0.88	-1.3
110,368	-		MPMX19_05420	0.88	-0.8
110,414	+				-0.1
110,414	+				+1.1
110,414	+				-0.9
110,415	-				-0.7
110,415	-				+0.1
110,415	-				+0.2
110,415	-				-0.7
110,415	-				+1.8
110,476	+				-0.9
110,563	+				-1.6
110,563	+				-0.4
110,564	-				-0.5
110,564	-				-2.1
110,564	-				-1.6
110,564	-				-0.8
110,564	-				-0.3
110,564	-				-1.9
110,564	-				-0.1
110,674	+		MPMX19_05421	0.21	-1.1
110,722	+		MPMX19_05421	0.27	+0.5
110,722	+		MPMX19_05421	0.27	-0.9
110,722	+		MPMX19_05421	0.27	-1.3
110,722	+		MPMX19_05421	0.27	-0.2
110,723	-		MPMX19_05421	0.27	-1.9
110,723	-		MPMX19_05421	0.27	+0.5
110,723	-		MPMX19_05421	0.27	-0.8
110,723	-		MPMX19_05421	0.27	+0.1
110,723	-		MPMX19_05421	0.27	-0.7
110,723	-		MPMX19_05421	0.27	-0.6
110,723	-		MPMX19_05421	0.27	-0.2
110,723	-		MPMX19_05421	0.27	-2.1
110,723	-		MPMX19_05421	0.27	-0.4
110,723	-		MPMX19_05421	0.27	+0.3
110,723	-		MPMX19_05421	0.27	-0.2
110,723	-		MPMX19_05421	0.27	+1.5
110,723	-		MPMX19_05421	0.27	-1.8
110,723	-		MPMX19_05421	0.27	-2.0
111,145	+		MPMX19_05421	0.75	-0.1
111,145	+		MPMX19_05421	0.75	-0.9
111,145	+		MPMX19_05421	0.75	+0.8
111,145	+		MPMX19_05421	0.75	-0.7
111,145	+		MPMX19_05421	0.75	-0.7
111,145	+		MPMX19_05421	0.75	-1.2
111,146	-		MPMX19_05421	0.75	+0.1
111,146	-		MPMX19_05421	0.75	-1.1
111,146	-		MPMX19_05421	0.75	-0.3
111,146	-		MPMX19_05421	0.75	+1.1
111,146	-		MPMX19_05421	0.75	+0.8
111,146	-		MPMX19_05421	0.75	-0.6
111,280	+				-0.7
111,281	-				-0.5
111,396	+				+0.7
111,396	+				-0.1
111,396	+				+0.5
111,396	+				-0.7
111,397	-				+0.7
111,397	-				-1.7
111,397	-				+0.1
111,433	+				-1.1
111,433	+				-0.9
111,433	+				-2.7
111,433	+				-0.8
111,434	-				-0.3
111,434	-				-1.0
111,434	-				-0.5
111,434	-				+0.3