Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05313 and MPMX19_05314 are separated by 64 nucleotides MPMX19_05314 and MPMX19_05315 are separated by 113 nucleotides
MPMX19_05313: MPMX19_05313 - 4,4'-diapolycopene aldehyde oxidase, at 851,060 to 852,355
_05313
MPMX19_05314: MPMX19_05314 - hypothetical protein, at 852,420 to 852,881
_05314
MPMX19_05315: MPMX19_05315 - Long-chain-fatty-acid--CoA ligase, at 852,995 to 854,572
_05315
Position (kb)
852
853 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 852.507 kb on + strand, within MPMX19_05314 at 852.507 kb on + strand, within MPMX19_05314 at 852.508 kb on - strand, within MPMX19_05314 at 852.508 kb on - strand, within MPMX19_05314 at 852.508 kb on - strand, within MPMX19_05314 at 852.771 kb on + strand, within MPMX19_05314 at 852.771 kb on + strand, within MPMX19_05314 at 852.896 kb on + strand at 852.897 kb on - strand at 852.974 kb on + strand at 852.974 kb on + strand at 852.974 kb on + strand at 852.975 kb on - strand at 852.975 kb on - strand at 852.975 kb on - strand at 852.975 kb on - strand at 852.975 kb on - strand at 852.975 kb on - strand at 852.975 kb on - strand at 852.976 kb on + strand at 852.976 kb on + strand at 852.976 kb on + strand at 852.976 kb on + strand at 852.976 kb on + strand at 852.976 kb on + strand at 852.976 kb on + strand at 852.976 kb on + strand at 852.976 kb on + strand at 852.976 kb on + strand at 852.977 kb on - strand at 852.977 kb on - strand at 852.977 kb on - strand at 852.977 kb on - strand at 852.977 kb on - strand at 852.977 kb on - strand at 852.977 kb on - strand at 852.977 kb on - strand at 852.977 kb on - strand at 852.977 kb on - strand at 853.014 kb on + strand at 853.014 kb on + strand at 853.014 kb on + strand at 853.015 kb on - strand at 853.015 kb on - strand at 853.015 kb on - strand at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.251 kb on + strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.252 kb on - strand, within MPMX19_05315 at 853.335 kb on + strand, within MPMX19_05315 at 853.335 kb on + strand, within MPMX19_05315 at 853.335 kb on + strand, within MPMX19_05315 at 853.336 kb on - strand, within MPMX19_05315 at 853.336 kb on - strand, within MPMX19_05315 at 853.353 kb on + strand, within MPMX19_05315 at 853.354 kb on - strand, within MPMX19_05315 at 853.354 kb on - strand, within MPMX19_05315 at 853.608 kb on + strand, within MPMX19_05315 at 853.608 kb on + strand, within MPMX19_05315 at 853.609 kb on - strand, within MPMX19_05315 at 853.609 kb on - strand, within MPMX19_05315 at 853.686 kb on + strand, within MPMX19_05315 at 853.687 kb on - strand, within MPMX19_05315 at 853.687 kb on - strand, within MPMX19_05315 at 853.687 kb on - strand, within MPMX19_05315 at 853.689 kb on + strand, within MPMX19_05315 at 853.689 kb on + strand, within MPMX19_05315 at 853.689 kb on + strand, within MPMX19_05315 at 853.689 kb on + strand, within MPMX19_05315 at 853.689 kb on + strand, within MPMX19_05315 at 853.689 kb on + strand, within MPMX19_05315 at 853.689 kb on + strand, within MPMX19_05315 at 853.690 kb on - strand, within MPMX19_05315 at 853.690 kb on - strand, within MPMX19_05315 at 853.690 kb on - strand, within MPMX19_05315 at 853.690 kb on - strand, within MPMX19_05315 at 853.690 kb on - strand, within MPMX19_05315 at 853.690 kb on - strand, within MPMX19_05315 at 853.690 kb on - strand, within MPMX19_05315 at 853.690 kb on - strand, within MPMX19_05315 at 853.690 kb on - strand, within MPMX19_05315
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 852,507 + MPMX19_05314 0.19 -0.2 852,507 + MPMX19_05314 0.19 -1.1 852,508 - MPMX19_05314 0.19 +0.0 852,508 - MPMX19_05314 0.19 +0.5 852,508 - MPMX19_05314 0.19 +0.1 852,771 + MPMX19_05314 0.76 +1.0 852,771 + MPMX19_05314 0.76 +0.6 852,896 + +0.5 852,897 - +0.1 852,974 + -0.5 852,974 + -1.0 852,974 + -2.8 852,975 - +0.4 852,975 - -0.2 852,975 - -0.9 852,975 - -0.3 852,975 - -2.1 852,975 - +1.6 852,975 - -0.3 852,976 + +0.4 852,976 + +0.4 852,976 + +0.4 852,976 + +0.0 852,976 + -0.6 852,976 + -0.5 852,976 + +1.0 852,976 + -0.3 852,976 + -1.9 852,976 + +0.7 852,977 - -1.7 852,977 - +0.0 852,977 - -0.9 852,977 - +0.1 852,977 - +0.4 852,977 - -1.4 852,977 - -1.2 852,977 - +0.2 852,977 - -0.6 852,977 - -2.2 853,014 + -0.7 853,014 + -1.3 853,014 + +0.3 853,015 - -1.4 853,015 - -0.3 853,015 - -1.2 853,251 + MPMX19_05315 0.16 +1.4 853,251 + MPMX19_05315 0.16 -1.2 853,251 + MPMX19_05315 0.16 +1.8 853,251 + MPMX19_05315 0.16 +0.5 853,251 + MPMX19_05315 0.16 +0.4 853,251 + MPMX19_05315 0.16 -0.2 853,251 + MPMX19_05315 0.16 +0.9 853,251 + MPMX19_05315 0.16 +1.0 853,251 + MPMX19_05315 0.16 -2.0 853,251 + MPMX19_05315 0.16 -1.9 853,251 + MPMX19_05315 0.16 -0.9 853,251 + MPMX19_05315 0.16 -0.8 853,252 - MPMX19_05315 0.16 -1.0 853,252 - MPMX19_05315 0.16 -0.2 853,252 - MPMX19_05315 0.16 +0.7 853,252 - MPMX19_05315 0.16 -1.5 853,252 - MPMX19_05315 0.16 -1.0 853,252 - MPMX19_05315 0.16 -2.4 853,252 - MPMX19_05315 0.16 -0.5 853,252 - MPMX19_05315 0.16 -1.3 853,252 - MPMX19_05315 0.16 -0.7 853,252 - MPMX19_05315 0.16 -0.1 853,252 - MPMX19_05315 0.16 -2.0 853,252 - MPMX19_05315 0.16 -0.1 853,335 + MPMX19_05315 0.22 -0.1 853,335 + MPMX19_05315 0.22 +0.1 853,335 + MPMX19_05315 0.22 +0.0 853,336 - MPMX19_05315 0.22 -0.5 853,336 - MPMX19_05315 0.22 -1.7 853,353 + MPMX19_05315 0.23 -0.3 853,354 - MPMX19_05315 0.23 -0.6 853,354 - MPMX19_05315 0.23 -0.4 853,608 + MPMX19_05315 0.39 -1.2 853,608 + MPMX19_05315 0.39 -0.9 853,609 - MPMX19_05315 0.39 -0.9 853,609 - MPMX19_05315 0.39 +0.1 853,686 + MPMX19_05315 0.44 -1.4 853,687 - MPMX19_05315 0.44 -0.5 853,687 - MPMX19_05315 0.44 +0.1 853,687 - MPMX19_05315 0.44 -0.3 853,689 + MPMX19_05315 0.44 -1.2 853,689 + MPMX19_05315 0.44 -0.2 853,689 + MPMX19_05315 0.44 -0.8 853,689 + MPMX19_05315 0.44 -0.6 853,689 + MPMX19_05315 0.44 +0.1 853,689 + MPMX19_05315 0.44 -0.8 853,689 + MPMX19_05315 0.44 -1.0 853,690 - MPMX19_05315 0.44 +0.4 853,690 - MPMX19_05315 0.44 -0.1 853,690 - MPMX19_05315 0.44 -0.8 853,690 - MPMX19_05315 0.44 -0.6 853,690 - MPMX19_05315 0.44 +0.4 853,690 - MPMX19_05315 0.44 -1.6 853,690 - MPMX19_05315 0.44 -0.2 853,690 - MPMX19_05315 0.44 -0.2 853,690 - MPMX19_05315 0.44 +0.6
Or see this region's nucleotide sequence