Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03863

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
108,545	-				+0.2
108,567	+				-1.2
108,567	+				+0.2
108,590	+				+1.2
108,590	+				-1.5
108,590	+				+0.9
108,590	+				-0.4
108,590	+				+1.1
108,590	+				-1.8
108,590	+				-0.4
108,590	+				-1.4
108,590	+				+0.4
108,590	+				-1.1
108,591	-				-0.5
108,591	-				-1.3
108,591	-				-0.1
108,591	-				-0.1
108,591	-				+0.9
108,591	-				-0.4
108,591	-				+0.6
108,591	-				+0.9
108,591	-				-0.4
108,592	+				-0.8
108,592	+				+0.2
108,593	-				-0.6
108,638	-				-1.9
108,790	+				-0.1
108,790	+				-0.4
108,790	+				+0.6
108,790	+				+1.0
108,790	+				-0.3
108,790	+				+0.5
108,790	+				-1.2
108,790	+				-1.0
108,791	-				-2.4
108,791	-				-1.3
108,791	-				-1.5
108,791	-				-0.1
108,791	-				+1.5
108,791	-				+0.2
108,791	-				-0.4
108,791	-				-1.1
108,791	-				-0.5
108,791	-				-2.2
108,791	-				-1.3
108,791	-				+0.4
108,791	-				+1.9
108,995	+				+2.2
108,995	+				-1.1
108,995	+				-1.9
108,996	-				-0.8
109,008	-				-0.6
109,124	+		MPMX19_03862	0.35	+1.0
109,125	-		MPMX19_03862	0.36	-1.0
109,142	+		MPMX19_03862	0.41	-0.4
109,142	+		MPMX19_03862	0.41	-0.9
109,142	+		MPMX19_03862	0.41	-0.7
109,143	-		MPMX19_03862	0.41	-0.4
109,143	-		MPMX19_03862	0.41	+0.6
109,148	+		MPMX19_03862	0.42	+0.8
109,148	+		MPMX19_03862	0.42	-0.9
109,148	+		MPMX19_03862	0.42	-0.7
109,149	-		MPMX19_03862	0.43	-1.3
109,149	-		MPMX19_03862	0.43	-1.6
109,149	-		MPMX19_03862	0.43	+0.6
109,149	-		MPMX19_03862	0.43	+0.2
109,149	-		MPMX19_03862	0.43	-0.1
109,149	-		MPMX19_03862	0.43	-1.0
109,149	-		MPMX19_03862	0.43	+0.4
109,149	-		MPMX19_03862	0.43	-0.0
109,149	-		MPMX19_03862	0.43	+0.0
109,346	+				-1.7
109,346	+				-0.6
109,346	+				+1.6
109,346	+				+0.8
109,346	+				-0.3
109,346	+				-1.3
109,346	+				+0.5
109,346	+				-0.4
109,346	+				-1.3
109,347	-				-1.1
109,347	-				-0.7
109,347	-				-1.1
109,465	+				+0.6
109,465	+				-0.7
109,465	+				+0.0
109,465	+				-0.4
109,465	+				-1.1
109,466	-				-1.0
109,466	-				-0.6
109,466	-				+0.2
109,466	-				+0.2
109,644	+		MPMX19_03863	0.25	+0.5
109,645	-		MPMX19_03863	0.25	-1.8
109,645	-		MPMX19_03863	0.25	-1.1
109,645	-		MPMX19_03863	0.25	-0.3
109,645	-		MPMX19_03863	0.25	-0.1
109,954	+		MPMX19_03863	0.51	-0.2
109,954	+		MPMX19_03863	0.51	-0.5
109,968	+		MPMX19_03863	0.52	-2.1
109,968	+		MPMX19_03863	0.52	-0.6
109,968	+		MPMX19_03863	0.52	-2.3
109,968	+		MPMX19_03863	0.52	-1.5
109,969	-		MPMX19_03863	0.52	-1.1
109,969	-		MPMX19_03863	0.52	+0.6
109,969	-		MPMX19_03863	0.52	+0.0
109,969	-		MPMX19_03863	0.52	-1.4
109,969	-		MPMX19_03863	0.52	-0.6
109,969	-		MPMX19_03863	0.52	+0.6
110,049	+		MPMX19_03863	0.59	+0.4
110,049	+		MPMX19_03863	0.59	-0.4
110,049	+		MPMX19_03863	0.59	-2.1
110,050	-		MPMX19_03863	0.59	-0.0
110,080	+		MPMX19_03863	0.61	+0.1
110,080	+		MPMX19_03863	0.61	-0.8
110,080	+		MPMX19_03863	0.61	+2.7
110,080	+		MPMX19_03863	0.61	+0.3
110,080	+		MPMX19_03863	0.61	-1.6
110,081	-		MPMX19_03863	0.61	+0.4
110,081	-		MPMX19_03863	0.61	-0.0
110,081	-		MPMX19_03863	0.61	-0.1
110,081	-		MPMX19_03863	0.61	-0.5
110,181	+		MPMX19_03863	0.70	+0.2
110,181	+		MPMX19_03863	0.70	-0.5
110,181	+		MPMX19_03863	0.70	+1.5
110,181	+		MPMX19_03863	0.70	-1.4
110,181	+		MPMX19_03863	0.70	-1.4
110,182	-		MPMX19_03863	0.70	-1.0
110,182	-		MPMX19_03863	0.70	+0.8
110,182	-		MPMX19_03863	0.70	-0.7
110,182	-		MPMX19_03863	0.70	-0.6
110,182	-		MPMX19_03863	0.70	-0.7
110,182	-		MPMX19_03863	0.70	+0.6
110,382	+		MPMX19_03863	0.86	+0.8
110,382	+		MPMX19_03863	0.86	-1.0
110,382	+		MPMX19_03863	0.86	+0.4
110,382	+		MPMX19_03863	0.86	-1.5
110,382	+		MPMX19_03863	0.86	+0.2
110,382	+		MPMX19_03863	0.86	+0.2
110,382	+		MPMX19_03863	0.86	-2.3
110,382	+		MPMX19_03863	0.86	-1.1
110,382	+		MPMX19_03863	0.86	-0.8
110,382	+		MPMX19_03863	0.86	+0.0
110,382	+		MPMX19_03863	0.86	-2.3
110,382	+		MPMX19_03863	0.86	-0.5
110,382	+		MPMX19_03863	0.86	-0.6
110,382	+		MPMX19_03863	0.86	-1.1
110,382	+		MPMX19_03863	0.86	+0.2
110,383	-		MPMX19_03863	0.87	-0.2
110,383	-		MPMX19_03863	0.87	-0.6
110,383	-		MPMX19_03863	0.87	-0.3
110,383	-		MPMX19_03863	0.87	-1.0
110,383	-		MPMX19_03863	0.87	+0.2
110,383	-		MPMX19_03863	0.87	-0.9
110,383	-		MPMX19_03863	0.87	-0.6
110,383	-		MPMX19_03863	0.87	+0.2
110,383	-		MPMX19_03863	0.87	+0.2
110,383	-		MPMX19_03863	0.87	-0.5
110,383	-		MPMX19_03863	0.87	-0.0
110,383	-		MPMX19_03863	0.87	+0.6
110,383	-		MPMX19_03863	0.87	+1.0
110,383	-		MPMX19_03863	0.87	+1.5
110,383	-		MPMX19_03863	0.87	+0.5
110,383	-		MPMX19_03863	0.87	+0.2
110,383	-		MPMX19_03863	0.87	-2.5
110,383	-		MPMX19_03863	0.87	-0.3
110,383	-		MPMX19_03863	0.87	-0.9
110,383	-		MPMX19_03863	0.87	-0.0
110,383	-		MPMX19_03863	0.87	-0.4
110,383	-		MPMX19_03863	0.87	-1.6
110,383	-		MPMX19_03863	0.87	-1.3
110,383	-		MPMX19_03863	0.87	+0.1
110,384	+		MPMX19_03863	0.87	+2.4
110,385	-		MPMX19_03863	0.87	-0.1
110,385	-		MPMX19_03863	0.87	+0.0
110,385	-		MPMX19_03863	0.87	-0.6
110,385	-		MPMX19_03863	0.87	-1.4
110,523	+				-0.5
110,523	+				-0.4
110,524	-				+0.9
110,550	+				-0.8
110,551	-				+1.5
110,605	+				-1.2
110,606	-				-0.4
110,784	+				+2.8
110,784	+				+0.1
110,784	+				+0.4
110,784	+				-0.0
110,784	+				-0.7
110,785	-				-1.3
110,785	-				+0.3
110,785	-				-0.8
110,785	-				-0.6
110,785	-				+0.4
110,915	-				+0.3
111,064	+		MPMX19_03864	0.15	-1.3
111,064	+		MPMX19_03864	0.15	-0.8
111,064	+		MPMX19_03864	0.15	-0.6
111,065	-		MPMX19_03864	0.15	-0.4
111,065	-		MPMX19_03864	0.15	-0.4
111,065	-		MPMX19_03864	0.15	-1.2
111,065	-		MPMX19_03864	0.15	-1.9
111,065	-		MPMX19_03864	0.15	-0.8
111,067	+		MPMX19_03864	0.15	-1.1
111,067	+		MPMX19_03864	0.15	+0.2
111,067	+		MPMX19_03864	0.15	-1.6
111,067	+		MPMX19_03864	0.15	+0.2
111,068	-		MPMX19_03864	0.15	-0.4
111,068	-		MPMX19_03864	0.15	-1.1
111,068	-		MPMX19_03864	0.15	+0.1
111,068	-		MPMX19_03864	0.15	-0.7
111,127	+		MPMX19_03864	0.21	-0.3
111,128	-		MPMX19_03864	0.21	-2.1
111,128	-		MPMX19_03864	0.21	+0.7
111,128	-		MPMX19_03864	0.21	+0.6