Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03796

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
30,401	+		MPMX19_03795	0.55	-0.6
30,401	+		MPMX19_03795	0.55	+0.8
30,402	-		MPMX19_03795	0.56	+0.5
30,402	-		MPMX19_03795	0.56	+0.9
30,402	-		MPMX19_03795	0.56	+0.2
30,402	-		MPMX19_03795	0.56	-0.3
30,402	-		MPMX19_03795	0.56	+0.2
30,402	-		MPMX19_03795	0.56	+0.8
30,402	-		MPMX19_03795	0.56	+1.0
30,402	-		MPMX19_03795	0.56	+0.4
30,402	-		MPMX19_03795	0.56	+0.0
31,217	+				-0.2
31,217	+				+2.2
31,218	-				-0.2
31,218	-				-0.5
31,218	-				-0.3
31,224	+				-0.0
31,224	+				-0.5
31,446	+				-0.5
31,446	+				-0.1
31,447	-				-0.1
31,447	-				-1.4
31,452	+				-1.0
31,452	+				-0.1
31,453	-				+0.2
31,453	-				-1.6
31,557	+		MPMX19_03796	0.22	-0.6
31,557	+		MPMX19_03796	0.22	+0.0
31,558	-		MPMX19_03796	0.22	-1.6
31,558	-		MPMX19_03796	0.22	+2.2
31,558	-		MPMX19_03796	0.22	+1.4
31,558	-		MPMX19_03796	0.22	-1.4
31,558	-		MPMX19_03796	0.22	-0.4
31,558	-		MPMX19_03796	0.22	+0.2
31,558	-		MPMX19_03796	0.22	+1.0
31,558	-		MPMX19_03796	0.22	-0.4
31,584	+		MPMX19_03796	0.26	-1.3
31,584	+		MPMX19_03796	0.26	-0.3
31,584	+		MPMX19_03796	0.26	-1.1
31,584	+		MPMX19_03796	0.26	+1.0
31,584	+		MPMX19_03796	0.26	+0.1
31,584	+		MPMX19_03796	0.26	+0.8
31,584	+		MPMX19_03796	0.26	-2.6
31,584	+		MPMX19_03796	0.26	-1.4
31,585	-		MPMX19_03796	0.26	-1.8
31,585	-		MPMX19_03796	0.26	+0.0
31,585	-		MPMX19_03796	0.26	-1.2
31,585	-		MPMX19_03796	0.26	+0.5
31,585	-		MPMX19_03796	0.26	-0.1
31,585	-		MPMX19_03796	0.26	-0.8
31,602	+		MPMX19_03796	0.28	-1.4
31,602	+		MPMX19_03796	0.28	-0.6
31,602	+		MPMX19_03796	0.28	-1.2
31,603	-		MPMX19_03796	0.28	+0.3
31,603	-		MPMX19_03796	0.28	+0.3
31,603	-		MPMX19_03796	0.28	-0.3
31,603	-		MPMX19_03796	0.28	+1.5
31,603	-		MPMX19_03796	0.28	-0.9
31,603	-		MPMX19_03796	0.28	-1.1
31,767	+		MPMX19_03796	0.50	+1.4
31,767	+		MPMX19_03796	0.50	-1.1
31,767	+		MPMX19_03796	0.50	-2.0
31,767	+		MPMX19_03796	0.50	-1.0
31,767	+		MPMX19_03796	0.50	-0.5
31,767	+		MPMX19_03796	0.50	-0.3
31,767	+		MPMX19_03796	0.50	-1.8
31,767	+		MPMX19_03796	0.50	+0.3
31,767	+		MPMX19_03796	0.50	+0.0
31,767	+		MPMX19_03796	0.50	-0.7
31,767	+		MPMX19_03796	0.50	-0.9
31,767	+		MPMX19_03796	0.50	-0.8
31,767	+		MPMX19_03796	0.50	-1.9
31,767	+		MPMX19_03796	0.50	-0.4
31,768	-		MPMX19_03796	0.50	-1.2
31,768	-		MPMX19_03796	0.50	-0.7
31,768	-		MPMX19_03796	0.50	-0.8
31,768	-		MPMX19_03796	0.50	-0.8
31,768	-		MPMX19_03796	0.50	-0.6
31,768	-		MPMX19_03796	0.50	+0.6
31,768	-		MPMX19_03796	0.50	-2.5
31,768	-		MPMX19_03796	0.50	-1.2
31,768	-		MPMX19_03796	0.50	-0.7
31,768	-		MPMX19_03796	0.50	-2.1
31,779	+		MPMX19_03796	0.52	-1.7
31,779	+		MPMX19_03796	0.52	-0.2
31,779	+		MPMX19_03796	0.52	-0.6
31,779	+		MPMX19_03796	0.52	-0.4
31,779	+		MPMX19_03796	0.52	-1.3
31,779	+		MPMX19_03796	0.52	+0.2
31,779	+		MPMX19_03796	0.52	-1.6
31,779	+		MPMX19_03796	0.52	-1.4
31,779	+		MPMX19_03796	0.52	-1.5
31,780	-		MPMX19_03796	0.52	-0.6
31,780	-		MPMX19_03796	0.52	-1.1
31,780	-		MPMX19_03796	0.52	+0.9
31,780	-		MPMX19_03796	0.52	-0.3
31,780	-		MPMX19_03796	0.52	-2.0
31,857	+		MPMX19_03796	0.62	-1.5
31,857	+		MPMX19_03796	0.62	-0.3
31,858	-		MPMX19_03796	0.62	+0.6
31,858	-		MPMX19_03796	0.62	-0.9
31,858	-		MPMX19_03796	0.62	-1.4
31,878	+		MPMX19_03796	0.65	+0.1
31,905	+		MPMX19_03796	0.69	-0.5
31,905	+		MPMX19_03796	0.69	+0.1
31,905	+		MPMX19_03796	0.69	+1.5
31,905	+		MPMX19_03796	0.69	-1.5
31,905	+		MPMX19_03796	0.69	-0.2
31,905	+		MPMX19_03796	0.69	-1.8
31,905	+		MPMX19_03796	0.69	-1.1
31,906	-		MPMX19_03796	0.69	-0.1
31,906	-		MPMX19_03796	0.69	+0.6
31,906	-		MPMX19_03796	0.69	+0.6
31,906	-		MPMX19_03796	0.69	-0.1
31,906	-		MPMX19_03796	0.69	-0.5
31,906	-		MPMX19_03796	0.69	-2.5
31,906	-		MPMX19_03796	0.69	-1.3
31,926	+		MPMX19_03796	0.71	+1.0
31,926	+		MPMX19_03796	0.71	-2.7
31,926	+		MPMX19_03796	0.71	+0.2
31,927	-		MPMX19_03796	0.72	+1.5
31,927	-		MPMX19_03796	0.72	-1.0
31,927	-		MPMX19_03796	0.72	-0.4
31,927	-		MPMX19_03796	0.72	-0.7
32,031	+		MPMX19_03796	0.86	+0.2
32,031	+		MPMX19_03796	0.86	-0.6
32,032	-		MPMX19_03796	0.86	-3.2
32,088	+				-1.7
32,362	+		MPMX19_03797	0.21	-1.3
32,362	+		MPMX19_03797	0.21	-0.5
32,362	+		MPMX19_03797	0.21	-0.8
32,362	+		MPMX19_03797	0.21	+0.2
32,362	+		MPMX19_03797	0.21	+1.2
32,362	+		MPMX19_03797	0.21	+0.6
32,362	+		MPMX19_03797	0.21	-0.6
32,362	+		MPMX19_03797	0.21	-0.2
32,362	+		MPMX19_03797	0.21	+0.0
32,363	-		MPMX19_03797	0.21	-0.7
32,363	-		MPMX19_03797	0.21	-0.3
32,363	-		MPMX19_03797	0.21	-0.7
32,363	-		MPMX19_03797	0.21	-0.8
32,363	-		MPMX19_03797	0.21	+0.9
32,363	-		MPMX19_03797	0.21	+0.1
32,398	+		MPMX19_03797	0.23	+0.2
32,398	+		MPMX19_03797	0.23	-0.1
32,398	+		MPMX19_03797	0.23	-0.3
32,398	+		MPMX19_03797	0.23	+0.5
32,398	+		MPMX19_03797	0.23	-0.1
32,398	+		MPMX19_03797	0.23	+0.4
32,398	+		MPMX19_03797	0.23	-1.1
32,398	+		MPMX19_03797	0.23	-1.1
32,399	-		MPMX19_03797	0.24	-0.1
32,399	-		MPMX19_03797	0.24	-0.7
32,399	-		MPMX19_03797	0.24	-0.1
32,399	-		MPMX19_03797	0.24	-0.9
32,399	-		MPMX19_03797	0.24	+1.2
32,399	-		MPMX19_03797	0.24	-0.6
32,399	-		MPMX19_03797	0.24	-1.0
32,399	-		MPMX19_03797	0.24	-0.2
32,473	+		MPMX19_03797	0.30	+0.1
32,473	+		MPMX19_03797	0.30	-1.4
32,473	+		MPMX19_03797	0.30	-0.9
32,473	+		MPMX19_03797	0.30	-1.5
32,473	+		MPMX19_03797	0.30	-0.3
32,473	+		MPMX19_03797	0.30	+0.8
32,473	+		MPMX19_03797	0.30	-1.3
32,474	-		MPMX19_03797	0.30	+1.2
32,474	-		MPMX19_03797	0.30	-0.1
32,474	-		MPMX19_03797	0.30	-0.6
32,474	-		MPMX19_03797	0.30	-1.4
32,474	-		MPMX19_03797	0.30	-1.1
32,761	+		MPMX19_03797	0.53	+0.3
32,761	+		MPMX19_03797	0.53	-0.1
32,761	+		MPMX19_03797	0.53	-0.4
32,761	+		MPMX19_03797	0.53	-1.1
32,762	-		MPMX19_03797	0.53	-0.1
32,762	-		MPMX19_03797	0.53	-2.2
32,762	-		MPMX19_03797	0.53	-2.8
32,762	-		MPMX19_03797	0.53	+0.9
32,783	+		MPMX19_03797	0.55	-1.5
32,827	+		MPMX19_03797	0.58	+0.4
32,827	+		MPMX19_03797	0.58	-1.7
32,827	+		MPMX19_03797	0.58	+0.4
32,827	+		MPMX19_03797	0.58	-0.5
32,827	+		MPMX19_03797	0.58	-0.4
32,827	+		MPMX19_03797	0.58	+0.3
32,827	+		MPMX19_03797	0.58	+1.2
32,828	-		MPMX19_03797	0.59	-0.1
32,828	-		MPMX19_03797	0.59	-0.7
32,828	-		MPMX19_03797	0.59	-0.7
32,828	-		MPMX19_03797	0.59	-0.5
32,828	-		MPMX19_03797	0.59	+0.8
32,828	-		MPMX19_03797	0.59	-0.9
32,828	-		MPMX19_03797	0.59	+0.6
32,828	-		MPMX19_03797	0.59	-0.0
32,864	+		MPMX19_03797	0.61	-1.6
32,864	+		MPMX19_03797	0.61	-0.1
32,864	+		MPMX19_03797	0.61	+0.6
32,865	-		MPMX19_03797	0.62	+1.5
32,932	+		MPMX19_03797	0.67	-1.0
32,932	+		MPMX19_03797	0.67	-1.0
32,932	+		MPMX19_03797	0.67	-2.5
32,932	+		MPMX19_03797	0.67	-0.5
32,932	+		MPMX19_03797	0.67	-2.1
32,932	+		MPMX19_03797	0.67	-0.5
32,932	+		MPMX19_03797	0.67	-0.4
32,932	+		MPMX19_03797	0.67	-2.5
32,933	-		MPMX19_03797	0.67	+0.6
32,933	-		MPMX19_03797	0.67	+0.3
32,933	-		MPMX19_03797	0.67	-2.8
32,933	-		MPMX19_03797	0.67	+0.6
32,933	-		MPMX19_03797	0.67	+0.2
32,933	-		MPMX19_03797	0.67	+0.9
33,003	+		MPMX19_03797	0.73	-0.1
33,003	+		MPMX19_03797	0.73	-1.0
33,004	-		MPMX19_03797	0.73	-0.1
33,011	+		MPMX19_03797	0.73	+0.0
33,082	+		MPMX19_03797	0.79	-1.1
33,082	+		MPMX19_03797	0.79	+0.2
33,083	-		MPMX19_03797	0.79	+0.7
33,083	-		MPMX19_03797	0.79	-0.5