Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03787

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
23,669	+		MPMX19_03783	0.70	+0.3
23,669	+		MPMX19_03783	0.70	-0.7
23,669	+		MPMX19_03783	0.70	-1.0
23,669	+		MPMX19_03783	0.70	-0.6
23,669	+		MPMX19_03783	0.70	-0.1
23,669	+		MPMX19_03783	0.70	-1.0
23,669	+		MPMX19_03783	0.70	+0.1
23,669	+		MPMX19_03783	0.70	-0.6
23,669	+		MPMX19_03783	0.70	+0.3
23,670	-		MPMX19_03783	0.70	+0.5
23,670	-		MPMX19_03783	0.70	-0.8
23,670	-		MPMX19_03783	0.70	+0.9
23,670	-		MPMX19_03783	0.70	-0.5
23,670	-		MPMX19_03783	0.70	-0.4
23,684	+		MPMX19_03783	0.72	-2.3
23,684	+		MPMX19_03783	0.72	-0.5
23,684	+		MPMX19_03783	0.72	-0.3
23,684	+		MPMX19_03783	0.72	+0.6
23,684	+		MPMX19_03783	0.72	+0.4
23,684	+		MPMX19_03783	0.72	-0.5
23,684	+		MPMX19_03783	0.72	-0.5
23,684	+		MPMX19_03783	0.72	+1.0
23,684	+		MPMX19_03783	0.72	-0.9
23,685	-		MPMX19_03783	0.72	-0.8
23,685	-		MPMX19_03783	0.72	+0.2
23,685	-		MPMX19_03783	0.72	-0.5
23,685	-		MPMX19_03783	0.72	-0.3
23,685	-		MPMX19_03783	0.72	-0.7
23,685	-		MPMX19_03783	0.72	-1.7
23,685	-		MPMX19_03783	0.72	+0.5
23,685	-		MPMX19_03783	0.72	-0.1
23,685	-		MPMX19_03783	0.72	-2.2
23,731	+		MPMX19_03783	0.79	-0.1
23,744	+		MPMX19_03783	0.80	-0.1
23,745	-		MPMX19_03783	0.80	+0.2
23,745	-		MPMX19_03783	0.80	-1.7
23,923	+		MPMX19_03784	0.14	-0.8
23,923	+		MPMX19_03784	0.14	-0.7
23,923	+		MPMX19_03784	0.14	-0.5
23,923	+		MPMX19_03784	0.14	-0.4
23,923	+		MPMX19_03784	0.14	+0.8
23,924	-		MPMX19_03784	0.14	+0.1
24,584	+		MPMX19_03786	0.70	-1.9
24,584	+		MPMX19_03786	0.70	+0.4
24,584	+		MPMX19_03786	0.70	-0.4
24,584	+		MPMX19_03786	0.70	+0.6
24,584	+		MPMX19_03786	0.70	-0.5
24,585	-		MPMX19_03786	0.70	-0.3
24,585	-		MPMX19_03786	0.70	+0.6
24,585	-		MPMX19_03786	0.70	+0.0
24,585	-		MPMX19_03786	0.70	+2.2
24,585	-		MPMX19_03786	0.70	-0.4
24,585	-		MPMX19_03786	0.70	-0.9
24,585	-		MPMX19_03786	0.70	+1.5
24,585	-		MPMX19_03786	0.70	+2.9
24,922	+		MPMX19_03787	0.54	-0.9
24,923	-		MPMX19_03787	0.55	-1.1
24,923	-		MPMX19_03787	0.55	-1.6
25,385	+		MPMX19_03788	0.54	+1.3
25,385	+		MPMX19_03788	0.54	+0.6
25,385	+		MPMX19_03788	0.54	-0.1
25,385	+		MPMX19_03788	0.54	-0.3
25,386	-		MPMX19_03788	0.55	-0.6
25,386	-		MPMX19_03788	0.55	-0.2
25,386	-		MPMX19_03788	0.55	-1.2
25,421	+		MPMX19_03788	0.62	-1.8
25,461	+		MPMX19_03788	0.71	-2.3
25,461	+		MPMX19_03788	0.71	+0.2
25,461	+		MPMX19_03788	0.71	-1.5
25,461	+		MPMX19_03788	0.71	-0.7
25,462	-		MPMX19_03788	0.72	+0.2
25,462	-		MPMX19_03788	0.72	-0.7
25,462	-		MPMX19_03788	0.72	-1.3
25,462	-		MPMX19_03788	0.72	-0.8
25,462	-		MPMX19_03788	0.72	-1.3
25,462	-		MPMX19_03788	0.72	-1.1
25,462	-		MPMX19_03788	0.72	-1.1
25,462	-		MPMX19_03788	0.72	-0.3
25,587	+				-1.9
25,587	+				-0.4
25,587	+				+2.2
25,588	-				+0.5
25,588	-				-2.8
25,598	+				-0.8
25,598	+				-1.0
25,599	-				-0.3
25,599	-				-0.4
25,599	-				-1.1
25,599	-				-0.6
25,687	+				+0.0
25,687	+				+0.6
25,687	+				-1.7
25,687	+				-0.1
25,688	-				-0.1
25,688	-				-0.4
25,688	-				+0.5
25,688	-				-0.8
25,688	-				-1.6
25,688	-				-1.1
25,688	-				-1.6
25,858	+		MPMX19_03789	0.41	+0.4
25,858	+		MPMX19_03789	0.41	-0.7
25,858	+		MPMX19_03789	0.41	-0.7
25,858	+		MPMX19_03789	0.41	-0.6
25,859	-		MPMX19_03789	0.41	+1.1
25,859	-		MPMX19_03789	0.41	+0.6
25,859	-		MPMX19_03789	0.41	-2.2
25,993	+		MPMX19_03789	0.66	+1.2
25,993	+		MPMX19_03789	0.66	+0.9
26,023	+		MPMX19_03789	0.72	-1.3
26,023	+		MPMX19_03789	0.72	-0.3
26,023	+		MPMX19_03789	0.72	-0.6
26,023	+		MPMX19_03789	0.72	-0.3
26,023	+		MPMX19_03789	0.72	+0.2
26,023	+		MPMX19_03789	0.72	-1.1
26,024	-		MPMX19_03789	0.72	+0.6
26,024	-		MPMX19_03789	0.72	+0.2
26,024	-		MPMX19_03789	0.72	-0.8
26,024	-		MPMX19_03789	0.72	+0.2
26,024	-		MPMX19_03789	0.72	+0.7
26,024	-		MPMX19_03789	0.72	-1.6
26,024	-		MPMX19_03789	0.72	-0.3
26,024	-		MPMX19_03789	0.72	-0.1
26,024	-		MPMX19_03789	0.72	-0.9
26,024	-		MPMX19_03789	0.72	-0.8
26,029	-		MPMX19_03789	0.73	-0.8
26,092	+		MPMX19_03789	0.85	-1.0
26,092	+		MPMX19_03789	0.85	-0.6
26,093	-		MPMX19_03789	0.85	+2.9
26,093	-		MPMX19_03789	0.85	-0.4
26,093	-		MPMX19_03789	0.85	-2.1
26,093	-		MPMX19_03789	0.85	-0.3
26,093	-		MPMX19_03789	0.85	+0.3
26,093	-		MPMX19_03789	0.85	-0.8
26,093	-		MPMX19_03789	0.85	+0.4
26,093	-		MPMX19_03789	0.85	+1.8