Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03771 and MPMX19_03772 are separated by 167 nucleotides MPMX19_03772 and MPMX19_03773 overlap by 8 nucleotides
MPMX19_03771: MPMX19_03771 - hypothetical protein, at 15,639 to 15,959
_03771
MPMX19_03772: MPMX19_03772 - hypothetical protein, at 16,127 to 16,612
_03772
MPMX19_03773: MPMX19_03773 - hypothetical protein, at 16,605 to 18,788
_03773
Position (kb) 15
16 Strain fitness (log2 ratio) -2
-1
0
1 at 14.838 kb on - strand at 14.842 kb on + strand at 14.843 kb on - strand at 14.847 kb on + strand at 14.847 kb on + strand at 14.861 kb on + strand at 14.862 kb on - strand at 14.924 kb on + strand at 14.925 kb on - strand at 14.925 kb on - strand at 15.472 kb on - strand at 15.472 kb on - strand at 15.472 kb on - strand at 15.472 kb on - strand at 15.472 kb on - strand at 15.472 kb on - strand at 15.472 kb on - strand at 15.478 kb on - strand at 15.478 kb on - strand at 15.478 kb on - strand at 15.478 kb on - strand at 15.623 kb on - strand at 15.649 kb on - strand at 15.762 kb on - strand, within MPMX19_03771 at 15.762 kb on - strand, within MPMX19_03771 at 15.871 kb on - strand, within MPMX19_03771 at 15.912 kb on - strand, within MPMX19_03771 at 15.912 kb on - strand, within MPMX19_03771 at 15.912 kb on - strand, within MPMX19_03771 at 15.912 kb on - strand, within MPMX19_03771 at 15.912 kb on - strand, within MPMX19_03771 at 15.912 kb on - strand, within MPMX19_03771 at 15.912 kb on - strand, within MPMX19_03771 at 15.912 kb on - strand, within MPMX19_03771 at 15.958 kb on - strand at 15.958 kb on - strand at 15.958 kb on - strand at 15.958 kb on - strand at 15.990 kb on - strand at 15.990 kb on - strand at 15.990 kb on - strand at 15.990 kb on - strand at 15.990 kb on - strand at 15.990 kb on - strand at 16.333 kb on + strand, within MPMX19_03772 at 16.333 kb on + strand, within MPMX19_03772 at 16.334 kb on - strand, within MPMX19_03772 at 16.334 kb on - strand, within MPMX19_03772 at 16.334 kb on - strand, within MPMX19_03772 at 16.334 kb on - strand, within MPMX19_03772 at 16.334 kb on - strand, within MPMX19_03772 at 16.334 kb on - strand, within MPMX19_03772 at 16.334 kb on - strand, within MPMX19_03772 at 16.458 kb on - strand, within MPMX19_03772 at 16.458 kb on - strand, within MPMX19_03772 at 16.458 kb on - strand, within MPMX19_03772
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 14,838 - -0.4 14,842 + -0.5 14,843 - -1.0 14,847 + -0.1 14,847 + +1.5 14,861 + +1.3 14,862 - -1.0 14,924 + -1.5 14,925 - +1.2 14,925 - +0.3 15,472 - -1.1 15,472 - -1.0 15,472 - -0.6 15,472 - -1.0 15,472 - -1.0 15,472 - -1.6 15,472 - -1.3 15,478 - -0.8 15,478 - +0.1 15,478 - -1.9 15,478 - +1.0 15,623 - -1.7 15,649 - -0.4 15,762 - MPMX19_03771 0.38 -1.3 15,762 - MPMX19_03771 0.38 +1.5 15,871 - MPMX19_03771 0.72 -2.7 15,912 - MPMX19_03771 0.85 +0.0 15,912 - MPMX19_03771 0.85 -1.9 15,912 - MPMX19_03771 0.85 -2.3 15,912 - MPMX19_03771 0.85 -0.8 15,912 - MPMX19_03771 0.85 -0.4 15,912 - MPMX19_03771 0.85 -1.3 15,912 - MPMX19_03771 0.85 -0.0 15,912 - MPMX19_03771 0.85 -2.1 15,958 - -0.6 15,958 - -0.5 15,958 - -1.9 15,958 - +0.4 15,990 - -0.5 15,990 - -0.5 15,990 - -0.1 15,990 - -1.8 15,990 - -0.6 15,990 - +0.7 16,333 + MPMX19_03772 0.42 -0.3 16,333 + MPMX19_03772 0.42 -1.7 16,334 - MPMX19_03772 0.43 +0.2 16,334 - MPMX19_03772 0.43 +0.4 16,334 - MPMX19_03772 0.43 -0.2 16,334 - MPMX19_03772 0.43 -1.3 16,334 - MPMX19_03772 0.43 -2.3 16,334 - MPMX19_03772 0.43 -1.2 16,334 - MPMX19_03772 0.43 -1.3 16,458 - MPMX19_03772 0.68 +0.5 16,458 - MPMX19_03772 0.68 -0.0 16,458 - MPMX19_03772 0.68 -0.6
Or see this region's nucleotide sequence