Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03634

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,069,209	+		MPMX19_03633	0.12	-0.1
1,069,209	+		MPMX19_03633	0.12	-0.6
1,069,209	+		MPMX19_03633	0.12	-0.6
1,069,210	-		MPMX19_03633	0.13	-0.2
1,069,210	-		MPMX19_03633	0.13	-1.2
1,069,506	+		MPMX19_03633	0.40	-0.0
1,069,506	+		MPMX19_03633	0.40	+1.3
1,069,506	+		MPMX19_03633	0.40	-1.1
1,069,506	+		MPMX19_03633	0.40	-0.2
1,069,506	+		MPMX19_03633	0.40	+2.0
1,069,506	+		MPMX19_03633	0.40	-1.2
1,069,506	+		MPMX19_03633	0.40	-1.4
1,069,507	-		MPMX19_03633	0.40	-0.8
1,069,507	-		MPMX19_03633	0.40	-1.0
1,069,507	-		MPMX19_03633	0.40	-1.5
1,069,645	-		MPMX19_03633	0.53	-2.3
1,069,645	-		MPMX19_03633	0.53	-1.3
1,069,645	-		MPMX19_03633	0.53	-0.0
1,069,830	+		MPMX19_03633	0.71	-0.5
1,069,914	+		MPMX19_03633	0.79	-0.7
1,069,914	+		MPMX19_03633	0.79	-1.7
1,069,915	-		MPMX19_03633	0.79	-0.6
1,069,926	+		MPMX19_03633	0.80	-0.7
1,069,926	+		MPMX19_03633	0.80	-0.1
1,069,927	-		MPMX19_03633	0.80	-1.3
1,069,927	-		MPMX19_03633	0.80	-1.2
1,070,038	-				-1.3
1,070,038	-				-0.2
1,070,038	-				-1.2
1,070,179	+				+0.3
1,070,180	-				-0.7
1,070,614	+		MPMX19_03634	0.48	+2.6
1,070,614	+		MPMX19_03634	0.48	-1.0
1,070,615	-		MPMX19_03634	0.48	+2.0
1,070,644	+		MPMX19_03634	0.51	-1.2
1,070,644	+		MPMX19_03634	0.51	-0.3
1,070,644	+		MPMX19_03634	0.51	-1.0
1,070,644	+		MPMX19_03634	0.51	+1.0
1,070,644	+		MPMX19_03634	0.51	-0.9
1,070,645	-		MPMX19_03634	0.51	-1.2
1,070,645	-		MPMX19_03634	0.51	-0.6
1,070,645	-		MPMX19_03634	0.51	-0.0
1,070,645	-		MPMX19_03634	0.51	-0.8
1,070,645	-		MPMX19_03634	0.51	+1.0
1,070,645	-		MPMX19_03634	0.51	-0.6
1,070,645	-		MPMX19_03634	0.51	-0.0
1,070,845	+		MPMX19_03634	0.72	+0.7
1,070,846	-		MPMX19_03634	0.72	-0.5
1,070,846	-		MPMX19_03634	0.72	-1.7
1,071,104	-				+1.3
1,071,404	-		MPMX19_03635	0.36	+0.4
1,071,404	-		MPMX19_03635	0.36	-0.9
1,071,691	+				-0.3
1,071,691	+				-2.3
1,071,691	+				+0.3
1,071,691	+				-0.7
1,071,691	+				-0.4
1,071,691	+				-0.6
1,071,691	+				+0.2
1,071,691	+				-1.6
1,071,691	+				-0.9
1,071,691	+				-1.8
1,071,691	+				-1.3
1,071,691	+				-0.5
1,071,692	-				-0.9
1,071,692	-				-0.6
1,071,692	-				-0.0
1,071,692	-				-2.5
1,071,968	+		MPMX19_03636	0.16	-2.0
1,071,968	+		MPMX19_03636	0.16	-1.0
1,071,968	+		MPMX19_03636	0.16	+0.8
1,071,968	+		MPMX19_03636	0.16	+0.3
1,072,050	+		MPMX19_03636	0.25	+1.0
1,072,050	+		MPMX19_03636	0.25	-0.9
1,072,051	-		MPMX19_03636	0.26	+0.3
1,072,051	-		MPMX19_03636	0.26	-0.2
1,072,051	-		MPMX19_03636	0.26	-0.5
1,072,051	-		MPMX19_03636	0.26	-0.8
1,072,051	-		MPMX19_03636	0.26	-1.8
1,072,051	-		MPMX19_03636	0.26	-0.8
1,072,051	-		MPMX19_03636	0.26	-0.5
1,072,051	-		MPMX19_03636	0.26	-1.1