Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03615

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,043,380	+		MPMX19_03614	0.38	+0.5
1,043,380	+		MPMX19_03614	0.38	-1.2
1,043,380	+		MPMX19_03614	0.38	+0.2
1,043,380	+		MPMX19_03614	0.38	+1.0
1,043,380	+		MPMX19_03614	0.38	-0.6
1,043,381	-		MPMX19_03614	0.38	-0.4
1,043,381	-		MPMX19_03614	0.38	-0.5
1,043,381	-		MPMX19_03614	0.38	-0.0
1,043,381	-		MPMX19_03614	0.38	+0.7
1,043,381	-		MPMX19_03614	0.38	-1.1
1,043,381	-		MPMX19_03614	0.38	+0.1
1,043,381	-		MPMX19_03614	0.38	-1.3
1,043,381	-		MPMX19_03614	0.38	-2.7
1,043,518	+		MPMX19_03614	0.51	-1.8
1,043,518	+		MPMX19_03614	0.51	-0.6
1,043,518	+		MPMX19_03614	0.51	+0.8
1,043,518	+		MPMX19_03614	0.51	-1.5
1,043,518	+		MPMX19_03614	0.51	-1.0
1,043,519	-		MPMX19_03614	0.51	-1.7
1,043,519	-		MPMX19_03614	0.51	+0.4
1,043,519	-		MPMX19_03614	0.51	-1.0
1,043,519	-		MPMX19_03614	0.51	-0.6
1,043,519	-		MPMX19_03614	0.51	-1.7
1,043,519	-		MPMX19_03614	0.51	+1.0
1,043,519	-		MPMX19_03614	0.51	-1.3
1,043,755	+		MPMX19_03614	0.73	-2.1
1,043,755	+		MPMX19_03614	0.73	+0.3
1,043,755	+		MPMX19_03614	0.73	+0.4
1,043,755	+		MPMX19_03614	0.73	-0.8
1,043,756	-		MPMX19_03614	0.73	-0.1
1,043,818	+		MPMX19_03614	0.79	-0.0
1,043,818	+		MPMX19_03614	0.79	-1.3
1,043,818	+		MPMX19_03614	0.79	-1.1
1,043,818	+		MPMX19_03614	0.79	-1.0
1,043,818	+		MPMX19_03614	0.79	+0.6
1,043,819	-		MPMX19_03614	0.79	+0.4
1,043,819	-		MPMX19_03614	0.79	-1.0
1,043,819	-		MPMX19_03614	0.79	+0.2
1,043,828	-		MPMX19_03614	0.80	-0.0
1,043,828	-		MPMX19_03614	0.80	-0.3
1,044,582	+		MPMX19_03615	0.20	+0.2
1,044,582	+		MPMX19_03615	0.20	-0.0
1,044,582	+		MPMX19_03615	0.20	-0.0
1,044,582	+		MPMX19_03615	0.20	-0.6
1,044,582	+		MPMX19_03615	0.20	-1.0
1,044,583	-		MPMX19_03615	0.20	-1.3
1,044,583	-		MPMX19_03615	0.20	-0.7
1,044,583	-		MPMX19_03615	0.20	-0.6
1,044,583	-		MPMX19_03615	0.20	-1.9
1,044,882	+		MPMX19_03615	0.37	-0.5
1,044,882	+		MPMX19_03615	0.37	-0.3
1,044,882	+		MPMX19_03615	0.37	-0.4
1,044,883	-		MPMX19_03615	0.37	-0.7
1,044,883	-		MPMX19_03615	0.37	-2.2
1,044,897	+		MPMX19_03615	0.38	-1.2
1,044,897	+		MPMX19_03615	0.38	-0.2
1,044,897	+		MPMX19_03615	0.38	+0.6
1,044,897	+		MPMX19_03615	0.38	-1.5
1,044,897	+		MPMX19_03615	0.38	+0.1
1,044,897	+		MPMX19_03615	0.38	-0.1
1,044,897	+		MPMX19_03615	0.38	-1.2
1,044,897	+		MPMX19_03615	0.38	-1.0
1,044,897	+		MPMX19_03615	0.38	+1.1
1,044,897	+		MPMX19_03615	0.38	-0.3
1,044,897	+		MPMX19_03615	0.38	+1.3
1,044,897	+		MPMX19_03615	0.38	-0.7
1,044,897	+		MPMX19_03615	0.38	-0.9
1,044,897	+		MPMX19_03615	0.38	+0.8
1,044,897	+		MPMX19_03615	0.38	-0.5
1,044,897	+		MPMX19_03615	0.38	+1.4
1,044,897	+		MPMX19_03615	0.38	+0.5
1,044,897	+		MPMX19_03615	0.38	-1.3
1,044,897	+		MPMX19_03615	0.38	+0.2
1,044,897	+		MPMX19_03615	0.38	+0.2
1,044,897	+		MPMX19_03615	0.38	-1.8
1,044,898	-		MPMX19_03615	0.38	-1.0
1,044,898	-		MPMX19_03615	0.38	-0.8
1,044,898	-		MPMX19_03615	0.38	-0.1
1,044,898	-		MPMX19_03615	0.38	-0.2
1,044,898	-		MPMX19_03615	0.38	+0.6
1,044,898	-		MPMX19_03615	0.38	-1.7
1,044,898	-		MPMX19_03615	0.38	+0.2
1,044,898	-		MPMX19_03615	0.38	-1.7
1,044,898	-		MPMX19_03615	0.38	-1.0
1,044,898	-		MPMX19_03615	0.38	-2.5
1,044,898	-		MPMX19_03615	0.38	+0.4
1,044,900	+		MPMX19_03615	0.38	-1.3
1,044,900	+		MPMX19_03615	0.38	-0.0
1,044,900	+		MPMX19_03615	0.38	+1.0
1,044,900	+		MPMX19_03615	0.38	+0.6
1,044,900	+		MPMX19_03615	0.38	-0.6
1,044,900	+		MPMX19_03615	0.38	-0.0
1,044,900	+		MPMX19_03615	0.38	-0.9
1,044,900	+		MPMX19_03615	0.38	-1.7
1,044,900	+		MPMX19_03615	0.38	-1.3
1,044,901	-		MPMX19_03615	0.38	-1.1
1,044,901	-		MPMX19_03615	0.38	+1.0
1,044,901	-		MPMX19_03615	0.38	+1.3
1,044,901	-		MPMX19_03615	0.38	-1.0
1,044,901	-		MPMX19_03615	0.38	+0.3
1,044,901	-		MPMX19_03615	0.38	-0.6
1,044,901	-		MPMX19_03615	0.38	-0.7
1,044,901	-		MPMX19_03615	0.38	-0.6
1,044,901	-		MPMX19_03615	0.38	-1.0
1,044,901	-		MPMX19_03615	0.38	+0.7
1,044,901	-		MPMX19_03615	0.38	-0.0
1,044,901	-		MPMX19_03615	0.38	+1.7
1,044,901	-		MPMX19_03615	0.38	-1.5
1,044,901	-		MPMX19_03615	0.38	+1.0
1,044,901	-		MPMX19_03615	0.38	-0.8
1,044,901	-		MPMX19_03615	0.38	-2.6
1,044,912	+		MPMX19_03615	0.39	-0.8
1,044,912	+		MPMX19_03615	0.39	-1.5
1,044,912	+		MPMX19_03615	0.39	-0.0
1,044,913	-		MPMX19_03615	0.39	-1.9
1,044,913	-		MPMX19_03615	0.39	-0.5
1,044,913	-		MPMX19_03615	0.39	-0.0
1,044,913	-		MPMX19_03615	0.39	-1.8
1,045,015	+		MPMX19_03615	0.44	+0.3
1,045,016	-		MPMX19_03615	0.44	-0.5
1,045,077	+		MPMX19_03615	0.48	-2.8
1,045,077	+		MPMX19_03615	0.48	-0.8
1,045,077	+		MPMX19_03615	0.48	-0.6
1,045,077	+		MPMX19_03615	0.48	-1.2
1,045,077	+		MPMX19_03615	0.48	+0.5
1,045,078	-		MPMX19_03615	0.48	-0.2
1,045,078	-		MPMX19_03615	0.48	+0.0
1,045,078	-		MPMX19_03615	0.48	-0.5
1,045,078	-		MPMX19_03615	0.48	-0.3
1,045,078	-		MPMX19_03615	0.48	-2.3
1,045,078	-		MPMX19_03615	0.48	+0.8
1,045,293	+		MPMX19_03615	0.60	-1.3
1,045,293	+		MPMX19_03615	0.60	+0.2
1,045,294	-		MPMX19_03615	0.60	-0.7
1,045,294	-		MPMX19_03615	0.60	-1.2
1,045,294	-		MPMX19_03615	0.60	-0.4
1,045,294	-		MPMX19_03615	0.60	+0.7
1,045,294	-		MPMX19_03615	0.60	-0.3
1,045,375	+		MPMX19_03615	0.64	-1.0
1,045,375	+		MPMX19_03615	0.64	+0.5
1,045,375	+		MPMX19_03615	0.64	-0.5
1,045,375	+		MPMX19_03615	0.64	-0.2
1,045,375	+		MPMX19_03615	0.64	-0.1
1,045,375	+		MPMX19_03615	0.64	+0.2
1,045,375	+		MPMX19_03615	0.64	+0.6
1,045,376	-		MPMX19_03615	0.65	-0.3
1,045,376	-		MPMX19_03615	0.65	-0.2
1,045,376	-		MPMX19_03615	0.65	+0.5
1,045,376	-		MPMX19_03615	0.65	+0.8
1,045,376	-		MPMX19_03615	0.65	-0.8
1,045,376	-		MPMX19_03615	0.65	-0.5
1,045,376	-		MPMX19_03615	0.65	-1.7
1,045,376	-		MPMX19_03615	0.65	-0.6
1,045,376	-		MPMX19_03615	0.65	-0.3
1,045,419	+		MPMX19_03615	0.67	+0.2
1,045,419	+		MPMX19_03615	0.67	-1.2
1,045,419	+		MPMX19_03615	0.67	+0.2
1,045,419	+		MPMX19_03615	0.67	-0.0
1,045,419	+		MPMX19_03615	0.67	+0.2
1,045,419	+		MPMX19_03615	0.67	-0.4
1,045,419	+		MPMX19_03615	0.67	-0.8
1,045,419	+		MPMX19_03615	0.67	-1.0
1,045,420	-		MPMX19_03615	0.67	-1.3
1,045,420	-		MPMX19_03615	0.67	-0.1
1,045,420	-		MPMX19_03615	0.67	-1.0
1,045,420	-		MPMX19_03615	0.67	+0.3
1,045,420	-		MPMX19_03615	0.67	-1.5
1,045,584	+		MPMX19_03615	0.76	-0.8
1,045,584	+		MPMX19_03615	0.76	+0.2
1,045,584	+		MPMX19_03615	0.76	+0.1
1,045,585	-		MPMX19_03615	0.76	-1.7
1,045,585	-		MPMX19_03615	0.76	-0.3
1,045,605	+		MPMX19_03615	0.77	-0.9
1,045,605	+		MPMX19_03615	0.77	-1.5
1,045,606	-		MPMX19_03615	0.77	-1.2
1,045,606	-		MPMX19_03615	0.77	+0.5
1,045,750	+		MPMX19_03615	0.85	-1.7
1,045,750	+		MPMX19_03615	0.85	-1.3
1,045,750	+		MPMX19_03615	0.85	-1.7
1,045,750	+		MPMX19_03615	0.85	+0.4
1,045,751	-		MPMX19_03615	0.86	-0.8
1,045,751	-		MPMX19_03615	0.86	-1.2
1,045,752	+		MPMX19_03615	0.86	-1.0
1,045,752	+		MPMX19_03615	0.86	-1.6
1,045,752	+		MPMX19_03615	0.86	-0.0
1,045,752	+		MPMX19_03615	0.86	-1.3
1,045,752	+		MPMX19_03615	0.86	-1.3
1,045,752	+		MPMX19_03615	0.86	-0.0
1,045,753	-		MPMX19_03615	0.86	-0.7
1,045,753	-		MPMX19_03615	0.86	-0.3
1,045,753	-		MPMX19_03615	0.86	+0.1
1,045,753	-		MPMX19_03615	0.86	+0.8
1,045,753	-		MPMX19_03615	0.86	+1.1
1,045,798	-		MPMX19_03615	0.88	+1.1
1,045,798	-		MPMX19_03615	0.88	-1.2
1,045,798	-		MPMX19_03615	0.88	-0.6
1,046,080	+				-0.9
1,046,080	+				-0.3
1,046,080	+				-1.8
1,046,080	+				-0.4
1,046,080	+				-1.7
1,046,080	+				-0.0
1,046,081	-				+1.3
1,046,112	+				-1.9
1,046,112	+				-1.5
1,046,113	-				-0.5
1,046,113	-				+1.3
1,046,113	-				-0.2
1,046,121	+				-0.7
1,046,121	+				-0.2
1,046,121	+				-0.5
1,046,121	+				-1.0
1,046,121	+				-0.0
1,046,121	+				-1.1
1,046,121	+				+0.1
1,046,121	+				-1.0
1,046,121	+				-0.8
1,046,121	+				-1.6
1,046,122	-				+0.2
1,046,122	-				+0.4
1,046,122	-				-1.1
1,046,122	-				-0.0
1,046,122	-				-0.0
1,046,216	+				-1.6
1,046,221	+				-1.8
1,046,221	+				-0.9
1,046,221	+				+0.5
1,046,221	+				-2.1
1,046,221	+				-0.8
1,046,221	+				-0.2
1,046,221	+				+0.3
1,046,221	+				-2.3
1,046,221	+				+0.5
1,046,221	+				-0.0
1,046,221	+				-1.3
1,046,221	+				-0.1
1,046,221	+				-0.0
1,046,221	+				+0.4
1,046,221	+				-0.0
1,046,221	+				-1.6
1,046,221	+				-2.9
1,046,221	+				+0.4
1,046,221	+				+0.4
1,046,221	+				-0.7
1,046,221	+				-0.3
1,046,222	-				-0.5
1,046,222	-				+0.4
1,046,222	-				-0.8
1,046,222	-				-1.1
1,046,222	-				-1.1
1,046,222	-				-1.7
1,046,222	-				+0.5
1,046,222	-				-0.1
1,046,222	-				+0.4
1,046,222	-				-0.0
1,046,222	-				-0.0
1,046,222	-				-0.0
1,046,222	-				-1.6
1,046,222	-				-1.7
1,046,222	-				-1.1
1,046,222	-				-0.5
1,046,222	-				-1.0
1,046,275	+				-0.0
1,046,276	-				-0.2
1,046,318	+				-0.9
1,046,724	+		MPMX19_03616	0.15	-2.0
1,046,724	+		MPMX19_03616	0.15	-1.7
1,046,725	-		MPMX19_03616	0.15	-1.5
1,046,725	-		MPMX19_03616	0.15	-1.2
1,046,725	-		MPMX19_03616	0.15	-1.2
1,046,725	-		MPMX19_03616	0.15	-2.0
1,046,725	-		MPMX19_03616	0.15	+0.3
1,046,943	+		MPMX19_03616	0.23	-0.5
1,046,944	-		MPMX19_03616	0.23	-0.5
1,046,944	-		MPMX19_03616	0.23	+0.3