Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03580

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,001,573	-		MPMX19_03579	0.73	-0.8
1,001,573	-		MPMX19_03579	0.73	-0.3
1,002,075	+				-0.2
1,002,076	-				-1.6
1,002,076	-				+0.8
1,002,076	-				-1.2
1,002,286	+		MPMX19_03580	0.17	-1.0
1,002,286	+		MPMX19_03580	0.17	+0.4
1,002,286	+		MPMX19_03580	0.17	-0.0
1,002,286	+		MPMX19_03580	0.17	-0.7
1,002,286	+		MPMX19_03580	0.17	-1.2
1,002,286	+		MPMX19_03580	0.17	-0.9
1,002,286	+		MPMX19_03580	0.17	-0.6
1,002,286	+		MPMX19_03580	0.17	-0.2
1,002,286	+		MPMX19_03580	0.17	+0.1
1,002,286	+		MPMX19_03580	0.17	-0.7
1,002,287	-		MPMX19_03580	0.17	-0.2
1,002,287	-		MPMX19_03580	0.17	-0.5
1,002,287	-		MPMX19_03580	0.17	-0.9
1,002,287	-		MPMX19_03580	0.17	-0.5
1,002,287	-		MPMX19_03580	0.17	-0.7
1,002,287	-		MPMX19_03580	0.17	-0.2
1,002,287	-		MPMX19_03580	0.17	-0.0
1,002,354	+		MPMX19_03580	0.22	-0.3
1,002,354	+		MPMX19_03580	0.22	-1.2
1,002,354	+		MPMX19_03580	0.22	+0.5
1,002,355	-		MPMX19_03580	0.22	-0.9
1,002,355	-		MPMX19_03580	0.22	-0.7
1,002,355	-		MPMX19_03580	0.22	-1.7
1,002,355	-		MPMX19_03580	0.22	+0.2
1,002,414	+		MPMX19_03580	0.26	-1.2
1,002,414	+		MPMX19_03580	0.26	+2.6
1,002,414	+		MPMX19_03580	0.26	-0.5
1,002,415	-		MPMX19_03580	0.26	-0.8
1,002,415	-		MPMX19_03580	0.26	+1.2
1,002,621	+		MPMX19_03580	0.40	-0.0
1,002,621	+		MPMX19_03580	0.40	-0.7
1,002,622	-		MPMX19_03580	0.40	-0.3
1,002,622	-		MPMX19_03580	0.40	-1.3
1,002,660	+		MPMX19_03580	0.42	-0.2
1,002,660	+		MPMX19_03580	0.42	-0.9
1,002,660	+		MPMX19_03580	0.42	-1.8
1,002,660	+		MPMX19_03580	0.42	-0.9
1,002,660	+		MPMX19_03580	0.42	-1.0
1,002,660	+		MPMX19_03580	0.42	-0.0
1,002,660	+		MPMX19_03580	0.42	+1.0
1,002,660	+		MPMX19_03580	0.42	-0.6
1,002,660	+		MPMX19_03580	0.42	-0.2
1,002,660	+		MPMX19_03580	0.42	-2.1
1,002,660	+		MPMX19_03580	0.42	-0.2
1,002,660	+		MPMX19_03580	0.42	-0.8
1,002,660	+		MPMX19_03580	0.42	-0.0
1,002,660	+		MPMX19_03580	0.42	-0.1
1,002,661	-		MPMX19_03580	0.43	-0.3
1,002,661	-		MPMX19_03580	0.43	-0.6
1,002,661	-		MPMX19_03580	0.43	-1.4
1,002,661	-		MPMX19_03580	0.43	+0.4
1,002,661	-		MPMX19_03580	0.43	+0.1
1,002,661	-		MPMX19_03580	0.43	-2.2
1,002,661	-		MPMX19_03580	0.43	-2.0
1,002,661	-		MPMX19_03580	0.43	+0.1
1,002,661	-		MPMX19_03580	0.43	-1.5
1,002,661	-		MPMX19_03580	0.43	-0.4
1,002,661	-		MPMX19_03580	0.43	-2.3
1,002,661	-		MPMX19_03580	0.43	-1.5
1,002,661	-		MPMX19_03580	0.43	-0.0
1,002,661	-		MPMX19_03580	0.43	-1.5
1,002,876	+		MPMX19_03580	0.57	+0.2
1,002,877	-		MPMX19_03580	0.57	-0.6
1,002,877	-		MPMX19_03580	0.57	-0.6
1,003,207	-		MPMX19_03580	0.79	-0.8
1,003,338	+		MPMX19_03580	0.88	-1.9
1,003,338	+		MPMX19_03580	0.88	-0.3
1,003,338	+		MPMX19_03580	0.88	-1.3
1,003,338	+		MPMX19_03580	0.88	+1.0
1,003,338	+		MPMX19_03580	0.88	-1.4
1,003,338	+		MPMX19_03580	0.88	-2.4
1,003,338	+		MPMX19_03580	0.88	+0.3
1,003,338	+		MPMX19_03580	0.88	+0.4
1,003,338	+		MPMX19_03580	0.88	-0.1
1,003,338	+		MPMX19_03580	0.88	+2.0
1,003,338	+		MPMX19_03580	0.88	-0.5
1,003,338	+		MPMX19_03580	0.88	+1.1
1,003,339	-		MPMX19_03580	0.88	-0.2
1,003,339	-		MPMX19_03580	0.88	-0.1
1,003,339	-		MPMX19_03580	0.88	-0.3
1,003,339	-		MPMX19_03580	0.88	+2.2
1,003,339	-		MPMX19_03580	0.88	-0.7
1,003,339	-		MPMX19_03580	0.88	-0.2
1,003,339	-		MPMX19_03580	0.88	-1.6
1,003,339	-		MPMX19_03580	0.88	-0.3
1,003,339	-		MPMX19_03580	0.88	+1.2
1,003,339	-		MPMX19_03580	0.88	-1.5
1,003,339	-		MPMX19_03580	0.88	-1.0
1,003,339	-		MPMX19_03580	0.88	-0.8
1,003,339	-		MPMX19_03580	0.88	-0.2
1,003,339	-		MPMX19_03580	0.88	+0.4
1,003,339	-		MPMX19_03580	0.88	-1.3
1,003,339	-		MPMX19_03580	0.88	-0.6
1,003,339	-		MPMX19_03580	0.88	-1.0
1,003,339	-		MPMX19_03580	0.88	-2.4
1,003,339	-		MPMX19_03580	0.88	-2.0
1,003,339	-		MPMX19_03580	0.88	-0.4
1,003,430	+				-2.4
1,003,430	+				+0.8
1,003,430	+				-0.4
1,003,430	+				-0.1
1,003,430	+				+0.4
1,003,430	+				-0.2
1,003,431	-				+0.2
1,003,431	-				-0.6
1,003,431	-				+0.4
1,003,431	-				-0.8
1,003,431	-				-0.8
1,003,431	-				+0.4
1,003,431	-				+0.4
1,003,431	-				-0.2
1,003,431	-				+0.4
1,003,531	+				-2.1
1,003,532	-				-0.2
1,003,532	-				+0.1
1,003,596	+				-2.9
1,003,820	+				-0.9
1,003,820	+				-1.9
1,003,820	+				-0.6
1,003,820	+				-1.3
1,003,820	+				-1.8
1,003,820	+				+0.2
1,003,820	+				+0.5
1,003,820	+				-0.8
1,003,820	+				-1.0
1,003,820	+				-0.4
1,003,820	+				-2.1
1,003,820	+				+1.1
1,003,820	+				-0.1
1,003,820	+				+0.7
1,003,820	+				-1.7
1,003,820	+				-1.2
1,003,820	+				-0.6
1,003,820	+				-0.5
1,003,820	+				-0.2
1,003,820	+				-0.3
1,003,820	+				-0.5
1,003,820	+				-0.6
1,003,820	+				-1.0
1,003,820	+				-0.4
1,003,820	+				-0.6
1,003,820	+				-1.9
1,003,820	+				-0.6
1,003,820	+				+1.4
1,003,820	+				+0.7
1,003,820	+				-0.3
1,003,820	+				-1.4
1,003,820	+				-1.5
1,003,820	+				-0.0
1,003,820	+				-0.4
1,003,821	-				-0.1
1,003,821	-				-0.0
1,003,821	-				+0.9
1,003,821	-				+0.6
1,003,821	-				-0.9
1,003,821	-				-0.9
1,003,821	-				-0.5
1,003,821	-				-0.6
1,003,821	-				+0.3
1,003,821	-				-1.0
1,003,821	-				-0.9
1,003,821	-				-0.2
1,003,821	-				-0.5
1,003,821	-				-3.4
1,003,821	-				+0.6
1,003,821	-				-0.3
1,003,821	-				-0.5
1,003,821	-				-0.3
1,003,821	-				-0.2
1,003,821	-				-1.7
1,003,821	-				-0.0
1,003,821	-				-0.3
1,003,821	-				-1.4
1,003,821	-				-2.3
1,003,821	-				-1.2
1,003,821	-				+0.2
1,003,821	-				-0.9
1,003,821	-				-0.6
1,003,821	-				-0.3
1,004,173	+		MPMX19_03581	0.21	-1.6
1,004,173	+		MPMX19_03581	0.21	-1.1
1,004,173	+		MPMX19_03581	0.21	-0.0
1,004,173	+		MPMX19_03581	0.21	-0.7
1,004,173	+		MPMX19_03581	0.21	-2.2
1,004,174	-		MPMX19_03581	0.21	-1.2
1,004,174	-		MPMX19_03581	0.21	+0.2
1,004,174	-		MPMX19_03581	0.21	-1.4
1,004,174	-		MPMX19_03581	0.21	-0.3
1,004,174	-		MPMX19_03581	0.21	-0.0
1,004,174	-		MPMX19_03581	0.21	-0.1
1,004,174	-		MPMX19_03581	0.21	-1.9
1,004,174	-		MPMX19_03581	0.21	-1.0
1,004,174	-		MPMX19_03581	0.21	-1.4
1,004,174	-		MPMX19_03581	0.21	+0.1
1,004,174	-		MPMX19_03581	0.21	-1.3
1,004,174	-		MPMX19_03581	0.21	+0.1
1,004,174	-		MPMX19_03581	0.21	-0.5
1,004,273	+		MPMX19_03581	0.25	-1.8
1,004,273	+		MPMX19_03581	0.25	-1.4
1,004,273	+		MPMX19_03581	0.25	-1.5
1,004,273	+		MPMX19_03581	0.25	-0.9
1,004,273	+		MPMX19_03581	0.25	-1.3
1,004,274	-		MPMX19_03581	0.25	-1.3
1,004,274	-		MPMX19_03581	0.25	+0.1
1,004,274	-		MPMX19_03581	0.25	+0.4
1,004,274	-		MPMX19_03581	0.25	-3.2
1,004,396	+		MPMX19_03581	0.30	-0.8
1,004,396	+		MPMX19_03581	0.30	-1.0
1,004,396	+		MPMX19_03581	0.30	-1.2
1,004,397	-		MPMX19_03581	0.30	+0.6
1,004,397	-		MPMX19_03581	0.30	+1.0
1,004,397	-		MPMX19_03581	0.30	-0.9
1,004,397	-		MPMX19_03581	0.30	-0.8
1,004,519	+		MPMX19_03581	0.34	-1.3
1,004,519	+		MPMX19_03581	0.34	+0.6