Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03380 and MPMX19_03381 overlap by 11 nucleotides MPMX19_03381 and MPMX19_03382 are separated by 9 nucleotides
MPMX19_03380: MPMX19_03380 - 5-oxoprolinase subunit C, at 764,665 to 765,636
_03380
MPMX19_03381: MPMX19_03381 - 5-oxoprolinase subunit B, at 765,626 to 766,501
_03381
MPMX19_03382: MPMX19_03382 - Biotin carboxylase, at 766,511 to 767,890
_03382
Position (kb) 765
766
767 Strain fitness (log2 ratio) -2
-1
0
1
2 at 764.825 kb on + strand, within MPMX19_03380 at 764.826 kb on - strand, within MPMX19_03380 at 764.898 kb on - strand, within MPMX19_03380 at 764.903 kb on + strand, within MPMX19_03380 at 764.903 kb on + strand, within MPMX19_03380 at 764.904 kb on - strand, within MPMX19_03380 at 764.904 kb on - strand, within MPMX19_03380 at 764.970 kb on + strand, within MPMX19_03380 at 764.970 kb on + strand, within MPMX19_03380 at 764.970 kb on + strand, within MPMX19_03380 at 764.970 kb on + strand, within MPMX19_03380 at 764.970 kb on + strand, within MPMX19_03380 at 764.971 kb on - strand, within MPMX19_03380 at 764.971 kb on - strand, within MPMX19_03380 at 765.080 kb on + strand, within MPMX19_03380 at 765.080 kb on + strand, within MPMX19_03380 at 765.080 kb on + strand, within MPMX19_03380 at 765.080 kb on + strand, within MPMX19_03380 at 765.080 kb on + strand, within MPMX19_03380 at 765.080 kb on + strand, within MPMX19_03380 at 765.081 kb on - strand, within MPMX19_03380 at 765.091 kb on + strand, within MPMX19_03380 at 765.092 kb on - strand, within MPMX19_03380 at 765.092 kb on - strand, within MPMX19_03380 at 765.092 kb on - strand, within MPMX19_03380 at 765.092 kb on - strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.242 kb on + strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.243 kb on - strand, within MPMX19_03380 at 765.299 kb on + strand, within MPMX19_03380 at 765.300 kb on - strand, within MPMX19_03380 at 765.300 kb on - strand, within MPMX19_03380 at 765.323 kb on + strand, within MPMX19_03380 at 765.323 kb on + strand, within MPMX19_03380 at 765.323 kb on + strand, within MPMX19_03380 at 765.530 kb on + strand, within MPMX19_03380 at 765.572 kb on + strand at 765.573 kb on - strand at 765.573 kb on - strand at 765.573 kb on - strand at 765.627 kb on + strand at 765.627 kb on + strand at 765.627 kb on + strand at 765.627 kb on + strand at 765.627 kb on + strand at 765.627 kb on + strand at 765.627 kb on + strand at 765.628 kb on - strand at 765.628 kb on - strand at 765.628 kb on - strand at 765.628 kb on - strand at 765.703 kb on + strand at 765.703 kb on + strand at 765.703 kb on + strand at 765.704 kb on - strand at 765.704 kb on - strand at 765.704 kb on - strand at 765.762 kb on + strand, within MPMX19_03381 at 765.762 kb on + strand, within MPMX19_03381 at 765.763 kb on - strand, within MPMX19_03381 at 765.763 kb on - strand, within MPMX19_03381 at 765.763 kb on - strand, within MPMX19_03381 at 765.763 kb on - strand, within MPMX19_03381 at 765.858 kb on + strand, within MPMX19_03381 at 765.858 kb on + strand, within MPMX19_03381 at 765.858 kb on + strand, within MPMX19_03381 at 765.858 kb on + strand, within MPMX19_03381 at 765.858 kb on + strand, within MPMX19_03381 at 765.859 kb on - strand, within MPMX19_03381 at 765.859 kb on - strand, within MPMX19_03381 at 765.859 kb on - strand, within MPMX19_03381 at 765.859 kb on - strand, within MPMX19_03381 at 765.859 kb on - strand, within MPMX19_03381 at 765.859 kb on - strand, within MPMX19_03381 at 765.891 kb on + strand, within MPMX19_03381 at 765.916 kb on - strand, within MPMX19_03381 at 765.916 kb on - strand, within MPMX19_03381 at 765.981 kb on + strand, within MPMX19_03381 at 765.982 kb on - strand, within MPMX19_03381 at 765.982 kb on - strand, within MPMX19_03381 at 765.982 kb on - strand, within MPMX19_03381 at 766.023 kb on + strand, within MPMX19_03381 at 766.024 kb on - strand, within MPMX19_03381 at 766.024 kb on - strand, within MPMX19_03381 at 766.113 kb on + strand, within MPMX19_03381 at 766.134 kb on + strand, within MPMX19_03381 at 766.134 kb on + strand, within MPMX19_03381 at 766.134 kb on + strand, within MPMX19_03381 at 766.134 kb on + strand, within MPMX19_03381 at 766.134 kb on + strand, within MPMX19_03381 at 766.134 kb on + strand, within MPMX19_03381 at 766.135 kb on - strand, within MPMX19_03381 at 766.135 kb on - strand, within MPMX19_03381 at 766.135 kb on - strand, within MPMX19_03381 at 766.212 kb on + strand, within MPMX19_03381 at 766.213 kb on - strand, within MPMX19_03381 at 766.215 kb on + strand, within MPMX19_03381 at 766.216 kb on - strand, within MPMX19_03381 at 766.216 kb on - strand, within MPMX19_03381 at 766.216 kb on - strand, within MPMX19_03381 at 766.216 kb on - strand, within MPMX19_03381 at 766.382 kb on - strand, within MPMX19_03381 at 766.382 kb on - strand, within MPMX19_03381 at 766.383 kb on + strand, within MPMX19_03381 at 766.383 kb on + strand, within MPMX19_03381 at 766.383 kb on + strand, within MPMX19_03381 at 766.383 kb on + strand, within MPMX19_03381 at 766.383 kb on + strand, within MPMX19_03381 at 766.383 kb on + strand, within MPMX19_03381 at 766.384 kb on - strand, within MPMX19_03381 at 766.384 kb on - strand, within MPMX19_03381 at 766.384 kb on - strand, within MPMX19_03381 at 766.384 kb on - strand, within MPMX19_03381 at 766.384 kb on - strand, within MPMX19_03381 at 766.384 kb on - strand, within MPMX19_03381 at 766.482 kb on + strand at 766.482 kb on + strand at 766.482 kb on + strand at 766.483 kb on - strand at 766.483 kb on - strand at 766.512 kb on + strand at 766.512 kb on + strand at 766.512 kb on + strand at 766.513 kb on - strand at 766.513 kb on - strand at 766.513 kb on - strand at 766.743 kb on + strand, within MPMX19_03382 at 766.743 kb on + strand, within MPMX19_03382 at 766.743 kb on + strand, within MPMX19_03382 at 766.743 kb on + strand, within MPMX19_03382 at 766.743 kb on + strand, within MPMX19_03382 at 766.744 kb on - strand, within MPMX19_03382 at 766.744 kb on - strand, within MPMX19_03382 at 766.744 kb on - strand, within MPMX19_03382 at 766.744 kb on - strand, within MPMX19_03382 at 766.761 kb on + strand, within MPMX19_03382 at 766.761 kb on + strand, within MPMX19_03382 at 766.761 kb on + strand, within MPMX19_03382 at 766.761 kb on + strand, within MPMX19_03382 at 766.761 kb on + strand, within MPMX19_03382 at 766.762 kb on - strand, within MPMX19_03382 at 766.762 kb on - strand, within MPMX19_03382 at 766.770 kb on + strand, within MPMX19_03382 at 766.770 kb on + strand, within MPMX19_03382 at 766.770 kb on + strand, within MPMX19_03382 at 766.770 kb on + strand, within MPMX19_03382 at 766.771 kb on - strand, within MPMX19_03382 at 766.771 kb on - strand, within MPMX19_03382 at 766.771 kb on - strand, within MPMX19_03382 at 766.771 kb on - strand, within MPMX19_03382 at 766.771 kb on - strand, within MPMX19_03382 at 766.771 kb on - strand, within MPMX19_03382 at 766.771 kb on - strand, within MPMX19_03382 at 766.771 kb on - strand, within MPMX19_03382 at 766.771 kb on - strand, within MPMX19_03382 at 766.771 kb on - strand, within MPMX19_03382 at 767.034 kb on + strand, within MPMX19_03382 at 767.034 kb on + strand, within MPMX19_03382 at 767.034 kb on + strand, within MPMX19_03382 at 767.034 kb on + strand, within MPMX19_03382 at 767.034 kb on + strand, within MPMX19_03382 at 767.034 kb on + strand, within MPMX19_03382 at 767.034 kb on + strand, within MPMX19_03382 at 767.034 kb on + strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.035 kb on - strand, within MPMX19_03382 at 767.058 kb on + strand, within MPMX19_03382 at 767.059 kb on - strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.064 kb on + strand, within MPMX19_03382 at 767.065 kb on - strand, within MPMX19_03382 at 767.150 kb on + strand, within MPMX19_03382 at 767.151 kb on - strand, within MPMX19_03382 at 767.295 kb on + strand, within MPMX19_03382 at 767.295 kb on + strand, within MPMX19_03382 at 767.295 kb on + strand, within MPMX19_03382 at 767.296 kb on - strand, within MPMX19_03382 at 767.296 kb on - strand, within MPMX19_03382
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 764,825 + MPMX19_03380 0.16 +0.2 764,826 - MPMX19_03380 0.17 -0.6 764,898 - MPMX19_03380 0.24 -0.4 764,903 + MPMX19_03380 0.24 +0.2 764,903 + MPMX19_03380 0.24 -0.3 764,904 - MPMX19_03380 0.25 +0.5 764,904 - MPMX19_03380 0.25 -1.5 764,970 + MPMX19_03380 0.31 -0.7 764,970 + MPMX19_03380 0.31 -0.3 764,970 + MPMX19_03380 0.31 -0.1 764,970 + MPMX19_03380 0.31 -0.7 764,970 + MPMX19_03380 0.31 +1.0 764,971 - MPMX19_03380 0.31 -0.3 764,971 - MPMX19_03380 0.31 -0.1 765,080 + MPMX19_03380 0.43 +2.0 765,080 + MPMX19_03380 0.43 -0.7 765,080 + MPMX19_03380 0.43 -0.4 765,080 + MPMX19_03380 0.43 -0.6 765,080 + MPMX19_03380 0.43 -1.8 765,080 + MPMX19_03380 0.43 +0.6 765,081 - MPMX19_03380 0.43 +0.1 765,091 + MPMX19_03380 0.44 -0.2 765,092 - MPMX19_03380 0.44 -0.7 765,092 - MPMX19_03380 0.44 -0.5 765,092 - MPMX19_03380 0.44 -0.2 765,092 - MPMX19_03380 0.44 -0.0 765,242 + MPMX19_03380 0.59 -1.2 765,242 + MPMX19_03380 0.59 -0.5 765,242 + MPMX19_03380 0.59 -1.0 765,242 + MPMX19_03380 0.59 +0.4 765,242 + MPMX19_03380 0.59 -0.2 765,242 + MPMX19_03380 0.59 +0.5 765,242 + MPMX19_03380 0.59 +1.4 765,242 + MPMX19_03380 0.59 -0.8 765,242 + MPMX19_03380 0.59 +0.6 765,242 + MPMX19_03380 0.59 -0.4 765,242 + MPMX19_03380 0.59 +0.1 765,242 + MPMX19_03380 0.59 +0.7 765,242 + MPMX19_03380 0.59 -0.7 765,243 - MPMX19_03380 0.59 +0.7 765,243 - MPMX19_03380 0.59 -1.0 765,243 - MPMX19_03380 0.59 +1.2 765,243 - MPMX19_03380 0.59 +0.2 765,243 - MPMX19_03380 0.59 -2.0 765,243 - MPMX19_03380 0.59 -0.4 765,243 - MPMX19_03380 0.59 +0.5 765,243 - MPMX19_03380 0.59 +0.2 765,243 - MPMX19_03380 0.59 +0.1 765,243 - MPMX19_03380 0.59 -0.6 765,243 - MPMX19_03380 0.59 -0.2 765,243 - MPMX19_03380 0.59 -0.5 765,299 + MPMX19_03380 0.65 +0.1 765,300 - MPMX19_03380 0.65 -1.4 765,300 - MPMX19_03380 0.65 -0.9 765,323 + MPMX19_03380 0.68 +0.8 765,323 + MPMX19_03380 0.68 -1.7 765,323 + MPMX19_03380 0.68 +1.0 765,530 + MPMX19_03380 0.89 -0.4 765,572 + +0.4 765,573 - -0.8 765,573 - -0.8 765,573 - +0.5 765,627 + -1.0 765,627 + +0.3 765,627 + +1.8 765,627 + +1.6 765,627 + +0.6 765,627 + -0.2 765,627 + +0.8 765,628 - +0.2 765,628 - -0.9 765,628 - -0.7 765,628 - -1.5 765,703 + -1.0 765,703 + -2.0 765,703 + -0.5 765,704 - +0.7 765,704 - -0.9 765,704 - -1.5 765,762 + MPMX19_03381 0.16 +0.5 765,762 + MPMX19_03381 0.16 -0.0 765,763 - MPMX19_03381 0.16 -1.0 765,763 - MPMX19_03381 0.16 -1.8 765,763 - MPMX19_03381 0.16 -1.0 765,763 - MPMX19_03381 0.16 -0.5 765,858 + MPMX19_03381 0.26 +0.1 765,858 + MPMX19_03381 0.26 -0.2 765,858 + MPMX19_03381 0.26 -1.5 765,858 + MPMX19_03381 0.26 +1.1 765,858 + MPMX19_03381 0.26 -1.6 765,859 - MPMX19_03381 0.27 -2.4 765,859 - MPMX19_03381 0.27 -0.0 765,859 - MPMX19_03381 0.27 -0.8 765,859 - MPMX19_03381 0.27 -1.4 765,859 - MPMX19_03381 0.27 -0.2 765,859 - MPMX19_03381 0.27 -0.7 765,891 + MPMX19_03381 0.30 -1.7 765,916 - MPMX19_03381 0.33 -0.8 765,916 - MPMX19_03381 0.33 -0.5 765,981 + MPMX19_03381 0.41 -0.7 765,982 - MPMX19_03381 0.41 -2.3 765,982 - MPMX19_03381 0.41 -0.7 765,982 - MPMX19_03381 0.41 -1.8 766,023 + MPMX19_03381 0.45 +1.3 766,024 - MPMX19_03381 0.45 -0.6 766,024 - MPMX19_03381 0.45 +1.0 766,113 + MPMX19_03381 0.56 -0.1 766,134 + MPMX19_03381 0.58 -0.6 766,134 + MPMX19_03381 0.58 -1.6 766,134 + MPMX19_03381 0.58 +0.7 766,134 + MPMX19_03381 0.58 -0.7 766,134 + MPMX19_03381 0.58 +0.0 766,134 + MPMX19_03381 0.58 -0.8 766,135 - MPMX19_03381 0.58 -0.5 766,135 - MPMX19_03381 0.58 -2.1 766,135 - MPMX19_03381 0.58 -0.5 766,212 + MPMX19_03381 0.67 -0.1 766,213 - MPMX19_03381 0.67 -0.2 766,215 + MPMX19_03381 0.67 -0.5 766,216 - MPMX19_03381 0.67 -0.0 766,216 - MPMX19_03381 0.67 -0.4 766,216 - MPMX19_03381 0.67 +0.2 766,216 - MPMX19_03381 0.67 +0.2 766,382 - MPMX19_03381 0.86 -0.0 766,382 - MPMX19_03381 0.86 +0.9 766,383 + MPMX19_03381 0.86 -0.6 766,383 + MPMX19_03381 0.86 +0.2 766,383 + MPMX19_03381 0.86 -1.3 766,383 + MPMX19_03381 0.86 +0.6 766,383 + MPMX19_03381 0.86 -1.9 766,383 + MPMX19_03381 0.86 +0.5 766,384 - MPMX19_03381 0.87 +1.4 766,384 - MPMX19_03381 0.87 -0.3 766,384 - MPMX19_03381 0.87 -2.0 766,384 - MPMX19_03381 0.87 -1.5 766,384 - MPMX19_03381 0.87 -1.6 766,384 - MPMX19_03381 0.87 -0.9 766,482 + -1.4 766,482 + +0.2 766,482 + +0.3 766,483 - -0.3 766,483 - -0.0 766,512 + -1.8 766,512 + +1.1 766,512 + -1.4 766,513 - -0.9 766,513 - -1.2 766,513 - -0.0 766,743 + MPMX19_03382 0.17 -1.5 766,743 + MPMX19_03382 0.17 -0.4 766,743 + MPMX19_03382 0.17 -0.4 766,743 + MPMX19_03382 0.17 -0.9 766,743 + MPMX19_03382 0.17 -0.5 766,744 - MPMX19_03382 0.17 -0.6 766,744 - MPMX19_03382 0.17 -0.4 766,744 - MPMX19_03382 0.17 -0.4 766,744 - MPMX19_03382 0.17 -1.9 766,761 + MPMX19_03382 0.18 -0.0 766,761 + MPMX19_03382 0.18 -0.5 766,761 + MPMX19_03382 0.18 -1.9 766,761 + MPMX19_03382 0.18 -1.0 766,761 + MPMX19_03382 0.18 +0.4 766,762 - MPMX19_03382 0.18 -1.4 766,762 - MPMX19_03382 0.18 -1.0 766,770 + MPMX19_03382 0.19 +2.0 766,770 + MPMX19_03382 0.19 +0.4 766,770 + MPMX19_03382 0.19 -1.0 766,770 + MPMX19_03382 0.19 -0.0 766,771 - MPMX19_03382 0.19 -0.4 766,771 - MPMX19_03382 0.19 +1.0 766,771 - MPMX19_03382 0.19 +0.4 766,771 - MPMX19_03382 0.19 -1.8 766,771 - MPMX19_03382 0.19 -0.3 766,771 - MPMX19_03382 0.19 -1.0 766,771 - MPMX19_03382 0.19 -1.9 766,771 - MPMX19_03382 0.19 -0.2 766,771 - MPMX19_03382 0.19 -1.2 766,771 - MPMX19_03382 0.19 -1.1 767,034 + MPMX19_03382 0.38 -0.7 767,034 + MPMX19_03382 0.38 -1.9 767,034 + MPMX19_03382 0.38 +0.6 767,034 + MPMX19_03382 0.38 -0.0 767,034 + MPMX19_03382 0.38 -0.9 767,034 + MPMX19_03382 0.38 -0.9 767,034 + MPMX19_03382 0.38 +0.6 767,034 + MPMX19_03382 0.38 -0.2 767,035 - MPMX19_03382 0.38 -1.4 767,035 - MPMX19_03382 0.38 -0.4 767,035 - MPMX19_03382 0.38 -0.0 767,035 - MPMX19_03382 0.38 -2.1 767,035 - MPMX19_03382 0.38 +0.6 767,035 - MPMX19_03382 0.38 -0.9 767,035 - MPMX19_03382 0.38 -0.5 767,035 - MPMX19_03382 0.38 -1.6 767,035 - MPMX19_03382 0.38 +0.6 767,035 - MPMX19_03382 0.38 +0.1 767,035 - MPMX19_03382 0.38 -1.0 767,035 - MPMX19_03382 0.38 +1.0 767,035 - MPMX19_03382 0.38 -1.1 767,035 - MPMX19_03382 0.38 +0.3 767,035 - MPMX19_03382 0.38 -1.5 767,058 + MPMX19_03382 0.40 -2.4 767,059 - MPMX19_03382 0.40 -0.7 767,064 + MPMX19_03382 0.40 -0.0 767,064 + MPMX19_03382 0.40 -1.9 767,064 + MPMX19_03382 0.40 -0.9 767,064 + MPMX19_03382 0.40 -0.9 767,064 + MPMX19_03382 0.40 -0.4 767,064 + MPMX19_03382 0.40 -0.6 767,064 + MPMX19_03382 0.40 -0.0 767,064 + MPMX19_03382 0.40 -1.1 767,064 + MPMX19_03382 0.40 +1.0 767,064 + MPMX19_03382 0.40 -1.0 767,064 + MPMX19_03382 0.40 -1.0 767,064 + MPMX19_03382 0.40 -1.4 767,064 + MPMX19_03382 0.40 -0.6 767,065 - MPMX19_03382 0.40 +0.8 767,150 + MPMX19_03382 0.46 -0.0 767,151 - MPMX19_03382 0.46 +0.2 767,295 + MPMX19_03382 0.57 -0.9 767,295 + MPMX19_03382 0.57 +0.1 767,295 + MPMX19_03382 0.57 -0.7 767,296 - MPMX19_03382 0.57 -1.1 767,296 - MPMX19_03382 0.57 -1.0
Or see this region's nucleotide sequence