Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03219 and MPMX19_03220 are separated by 121 nucleotides MPMX19_03220 and MPMX19_03221 are separated by 8 nucleotides
MPMX19_03219: MPMX19_03219 - putative ABC transporter ATP-binding protein YheS, at 518,954 to 520,552
_03219
MPMX19_03220: MPMX19_03220 - hypothetical protein, at 520,674 to 521,312
_03220
MPMX19_03221: MPMX19_03221 - Adaptive-response sensory-kinase SasA, at 521,321 to 522,673
_03221
Position (kb) 520
521
522 Strain fitness (log2 ratio) -2
-1
0
1 at 520.842 kb on + strand, within MPMX19_03220 at 520.984 kb on - strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.369 kb on + strand at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221 at 521.704 kb on - strand, within MPMX19_03221 at 521.704 kb on - strand, within MPMX19_03221 at 521.704 kb on - strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.784 kb on + strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.785 kb on - strand, within MPMX19_03221 at 521.949 kb on + strand, within MPMX19_03221 at 521.949 kb on + strand, within MPMX19_03221 at 521.949 kb on + strand, within MPMX19_03221 at 521.949 kb on + strand, within MPMX19_03221 at 521.950 kb on - strand, within MPMX19_03221 at 521.950 kb on - strand, within MPMX19_03221
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 520,842 + MPMX19_03220 0.26 -1.0 520,984 - MPMX19_03220 0.49 -0.9 521,010 + MPMX19_03220 0.53 -0.6 521,010 + MPMX19_03220 0.53 -0.1 521,010 + MPMX19_03220 0.53 -0.9 521,010 + MPMX19_03220 0.53 -0.6 521,010 + MPMX19_03220 0.53 -2.4 521,010 + MPMX19_03220 0.53 +0.2 521,022 + MPMX19_03220 0.54 -1.3 521,022 + MPMX19_03220 0.54 -0.1 521,022 + MPMX19_03220 0.54 +0.1 521,022 + MPMX19_03220 0.54 -1.9 521,022 + MPMX19_03220 0.54 -2.5 521,022 + MPMX19_03220 0.54 -1.1 521,022 + MPMX19_03220 0.54 -0.2 521,023 - MPMX19_03220 0.55 -1.3 521,023 - MPMX19_03220 0.55 -0.2 521,023 - MPMX19_03220 0.55 +0.5 521,023 - MPMX19_03220 0.55 -1.7 521,023 - MPMX19_03220 0.55 +0.6 521,023 - MPMX19_03220 0.55 -1.6 521,023 - MPMX19_03220 0.55 -0.3 521,023 - MPMX19_03220 0.55 -2.4 521,023 - MPMX19_03220 0.55 -0.3 521,023 - MPMX19_03220 0.55 -0.9 521,023 - MPMX19_03220 0.55 -1.0 521,369 + -1.8 521,470 - MPMX19_03221 0.11 -1.8 521,470 - MPMX19_03221 0.11 -1.0 521,470 - MPMX19_03221 0.11 -0.6 521,470 - MPMX19_03221 0.11 +0.6 521,704 - MPMX19_03221 0.28 +0.2 521,704 - MPMX19_03221 0.28 +1.0 521,704 - MPMX19_03221 0.28 -1.0 521,784 + MPMX19_03221 0.34 -0.3 521,784 + MPMX19_03221 0.34 -0.9 521,784 + MPMX19_03221 0.34 -0.9 521,784 + MPMX19_03221 0.34 +0.7 521,784 + MPMX19_03221 0.34 -1.3 521,784 + MPMX19_03221 0.34 -0.3 521,784 + MPMX19_03221 0.34 -0.6 521,785 - MPMX19_03221 0.34 +0.8 521,785 - MPMX19_03221 0.34 +1.4 521,785 - MPMX19_03221 0.34 +1.6 521,785 - MPMX19_03221 0.34 +0.3 521,785 - MPMX19_03221 0.34 +0.0 521,785 - MPMX19_03221 0.34 -0.5 521,949 + MPMX19_03221 0.46 -0.1 521,949 + MPMX19_03221 0.46 -0.7 521,949 + MPMX19_03221 0.46 +0.1 521,949 + MPMX19_03221 0.46 -0.2 521,950 - MPMX19_03221 0.46 -2.6 521,950 - MPMX19_03221 0.46 -1.0
Or see this region's nucleotide sequence