Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03186 and MPMX19_03187 are separated by 356 nucleotides
MPMX19_03186: MPMX19_03186 - hypothetical protein, at 481,271 to 482,917
_03186
MPMX19_03187: MPMX19_03187 - Magnesium-transporting ATPase, P-type 1, at 483,274 to 485,817
_03187
Position (kb) 481
482
483 Strain fitness (log2 ratio) -2
-1
0
1
2 at 480.295 kb on + strand at 480.295 kb on + strand at 480.296 kb on - strand at 480.296 kb on - strand at 480.296 kb on - strand at 480.296 kb on - strand at 480.296 kb on - strand at 480.296 kb on - strand at 480.312 kb on - strand at 480.312 kb on - strand at 480.312 kb on - strand at 480.321 kb on - strand at 481.156 kb on + strand at 481.156 kb on + strand at 481.156 kb on + strand at 481.156 kb on + strand at 481.166 kb on + strand at 481.166 kb on + strand at 481.166 kb on + strand at 481.166 kb on + strand at 481.208 kb on + strand at 481.209 kb on - strand at 481.214 kb on + strand at 481.214 kb on + strand at 481.214 kb on + strand at 481.404 kb on + strand at 481.404 kb on + strand at 481.404 kb on + strand at 481.404 kb on + strand at 481.404 kb on + strand at 481.404 kb on + strand at 481.404 kb on + strand at 481.405 kb on - strand at 481.405 kb on - strand at 481.405 kb on - strand at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.717 kb on - strand, within MPMX19_03186 at 481.718 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 481.816 kb on - strand, within MPMX19_03186 at 482.199 kb on - strand, within MPMX19_03186 at 482.199 kb on - strand, within MPMX19_03186 at 482.199 kb on - strand, within MPMX19_03186 at 482.199 kb on - strand, within MPMX19_03186 at 482.199 kb on - strand, within MPMX19_03186 at 482.199 kb on - strand, within MPMX19_03186 at 482.275 kb on - strand, within MPMX19_03186 at 482.841 kb on + strand at 482.841 kb on + strand at 482.841 kb on + strand at 482.841 kb on + strand at 482.841 kb on + strand at 482.842 kb on - strand at 482.842 kb on - strand at 482.842 kb on - strand at 482.842 kb on - strand at 482.842 kb on - strand at 483.053 kb on + strand at 483.069 kb on + strand at 483.070 kb on - strand at 483.088 kb on + strand at 483.088 kb on + strand at 483.206 kb on + strand at 483.243 kb on + strand at 483.243 kb on + strand at 483.244 kb on - strand at 483.244 kb on - strand at 483.244 kb on - strand at 483.254 kb on - strand at 483.254 kb on - strand at 483.254 kb on - strand at 483.254 kb on - strand at 483.254 kb on - strand at 483.254 kb on - strand at 483.330 kb on + strand at 483.330 kb on + strand at 483.330 kb on + strand at 483.331 kb on - strand at 483.331 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 480,295 + +0.7 480,295 + -0.6 480,296 - -1.7 480,296 - -1.8 480,296 - -1.1 480,296 - -0.7 480,296 - +1.1 480,296 - -0.1 480,312 - -0.3 480,312 - +0.0 480,312 - +0.2 480,321 - -0.1 481,156 + -0.8 481,156 + +1.3 481,156 + -0.9 481,156 + -0.2 481,166 + -1.3 481,166 + -1.0 481,166 + -0.4 481,166 + -0.6 481,208 + -0.6 481,209 - +0.7 481,214 + -0.1 481,214 + +0.0 481,214 + -0.8 481,404 + +1.0 481,404 + -1.1 481,404 + +2.0 481,404 + -0.4 481,404 + -1.3 481,404 + -0.3 481,404 + -0.6 481,405 - -0.6 481,405 - -0.8 481,405 - -1.6 481,717 - MPMX19_03186 0.27 +0.4 481,717 - MPMX19_03186 0.27 +0.0 481,717 - MPMX19_03186 0.27 +0.0 481,717 - MPMX19_03186 0.27 -0.6 481,717 - MPMX19_03186 0.27 +0.6 481,717 - MPMX19_03186 0.27 -1.1 481,717 - MPMX19_03186 0.27 -0.8 481,717 - MPMX19_03186 0.27 -0.2 481,717 - MPMX19_03186 0.27 -0.7 481,717 - MPMX19_03186 0.27 -1.2 481,717 - MPMX19_03186 0.27 +0.4 481,717 - MPMX19_03186 0.27 +0.4 481,717 - MPMX19_03186 0.27 -0.3 481,717 - MPMX19_03186 0.27 +0.0 481,717 - MPMX19_03186 0.27 +0.6 481,717 - MPMX19_03186 0.27 +1.8 481,718 - MPMX19_03186 0.27 -0.6 481,816 - MPMX19_03186 0.33 -1.0 481,816 - MPMX19_03186 0.33 -0.8 481,816 - MPMX19_03186 0.33 -1.4 481,816 - MPMX19_03186 0.33 -0.3 481,816 - MPMX19_03186 0.33 -1.1 481,816 - MPMX19_03186 0.33 -1.4 481,816 - MPMX19_03186 0.33 -0.7 481,816 - MPMX19_03186 0.33 -0.2 481,816 - MPMX19_03186 0.33 -1.1 481,816 - MPMX19_03186 0.33 -2.0 481,816 - MPMX19_03186 0.33 -1.5 481,816 - MPMX19_03186 0.33 +1.3 482,199 - MPMX19_03186 0.56 +0.6 482,199 - MPMX19_03186 0.56 -0.7 482,199 - MPMX19_03186 0.56 -1.1 482,199 - MPMX19_03186 0.56 -1.1 482,199 - MPMX19_03186 0.56 -2.0 482,199 - MPMX19_03186 0.56 -0.8 482,275 - MPMX19_03186 0.61 -0.1 482,841 + -0.9 482,841 + +1.0 482,841 + -0.6 482,841 + -1.4 482,841 + -0.6 482,842 - -1.0 482,842 - -1.0 482,842 - -1.1 482,842 - -1.1 482,842 - -1.0 483,053 + -0.6 483,069 + -0.6 483,070 - -0.6 483,088 + +0.2 483,088 + +0.4 483,206 + -0.7 483,243 + +0.2 483,243 + -1.3 483,244 - -0.9 483,244 - -0.3 483,244 - +0.0 483,254 - -0.4 483,254 - +0.5 483,254 - -1.4 483,254 - -0.8 483,254 - +0.2 483,254 - +0.8 483,330 + -0.1 483,330 + -0.8 483,330 + -1.0 483,331 - -1.5 483,331 - -1.2
Or see this region's nucleotide sequence