Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03090 and MPMX19_03091 are separated by 33 nucleotides MPMX19_03091 and MPMX19_03092 overlap by 4 nucleotides MPMX19_03092 and MPMX19_03093 overlap by 4 nucleotides
MPMX19_03090: MPMX19_03090 - Macrolide export ATP-binding/permease protein MacB, at 361,250 to 363,181
_03090
MPMX19_03091: MPMX19_03091 - hypothetical protein, at 363,215 to 364,087
_03091
MPMX19_03092: MPMX19_03092 - High-affinity zinc uptake system membrane protein ZnuB, at 364,084 to 364,974
_03092
MPMX19_03093: MPMX19_03093 - Manganese import ATP-binding protein ScaC, at 364,971 to 365,711
_03093
Position (kb) 363
364
365 Strain fitness (log2 ratio) -2
-1
0
1 at 362.288 kb on + strand, within MPMX19_03090 at 362.289 kb on - strand, within MPMX19_03090 at 363.179 kb on + strand at 363.180 kb on - strand at 363.180 kb on - strand at 363.399 kb on + strand, within MPMX19_03091 at 363.399 kb on + strand, within MPMX19_03091 at 363.399 kb on + strand, within MPMX19_03091 at 363.400 kb on - strand, within MPMX19_03091 at 363.801 kb on + strand, within MPMX19_03091 at 364.382 kb on + strand, within MPMX19_03092 at 364.383 kb on - strand, within MPMX19_03092 at 364.383 kb on - strand, within MPMX19_03092 at 364.383 kb on - strand, within MPMX19_03092 at 364.679 kb on + strand, within MPMX19_03092 at 364.679 kb on + strand, within MPMX19_03092 at 364.679 kb on + strand, within MPMX19_03092 at 364.680 kb on - strand, within MPMX19_03092 at 364.680 kb on - strand, within MPMX19_03092 at 364.727 kb on + strand, within MPMX19_03092 at 364.727 kb on + strand, within MPMX19_03092 at 364.728 kb on - strand, within MPMX19_03092 at 364.728 kb on - strand, within MPMX19_03092 at 364.728 kb on - strand, within MPMX19_03092 at 364.728 kb on - strand, within MPMX19_03092 at 364.739 kb on + strand, within MPMX19_03092 at 364.739 kb on + strand, within MPMX19_03092 at 364.739 kb on + strand, within MPMX19_03092 at 364.740 kb on - strand, within MPMX19_03092 at 364.740 kb on - strand, within MPMX19_03092
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 362,288 + MPMX19_03090 0.54 -1.5 362,289 - MPMX19_03090 0.54 +0.8 363,179 + -0.8 363,180 - -0.1 363,180 - -0.6 363,399 + MPMX19_03091 0.21 -1.7 363,399 + MPMX19_03091 0.21 -0.7 363,399 + MPMX19_03091 0.21 +0.4 363,400 - MPMX19_03091 0.21 -1.2 363,801 + MPMX19_03091 0.67 -0.9 364,382 + MPMX19_03092 0.33 -0.7 364,383 - MPMX19_03092 0.34 +0.9 364,383 - MPMX19_03092 0.34 -1.0 364,383 - MPMX19_03092 0.34 +0.5 364,679 + MPMX19_03092 0.67 -2.0 364,679 + MPMX19_03092 0.67 +0.5 364,679 + MPMX19_03092 0.67 -0.8 364,680 - MPMX19_03092 0.67 +0.3 364,680 - MPMX19_03092 0.67 +0.3 364,727 + MPMX19_03092 0.72 +0.3 364,727 + MPMX19_03092 0.72 -0.3 364,728 - MPMX19_03092 0.72 -0.9 364,728 - MPMX19_03092 0.72 -1.8 364,728 - MPMX19_03092 0.72 -0.1 364,728 - MPMX19_03092 0.72 +0.1 364,739 + MPMX19_03092 0.74 -0.4 364,739 + MPMX19_03092 0.74 -0.3 364,739 + MPMX19_03092 0.74 -1.8 364,740 - MPMX19_03092 0.74 -0.8 364,740 - MPMX19_03092 0.74 +0.4
Or see this region's nucleotide sequence